RNA–Protein interactions for RNA: YMR106C

YKU80, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeast

Gene YKU80, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKU80	YMR106C	POP7	P38291	140 aa		2.58	□□□□□ -2
YKU80	YMR106C	YBR225W	P38321	900 aa		2.58	□□□□□ -2
YKU80	YMR106C	KEL1	P38853	1164 aa	Known RBP	2.58	□□□□□ -2
YKU80	YMR106C	UTP9	P38882	575 aa	Known RBP	2.58	□□□□□ -2
YKU80	YMR106C	YDR089W	P38966	869 aa		2.58	□□□□□ -2
YKU80	YMR106C	MRX1	P40050	688 aa		2.58	□□□□□ -2
YKU80	YMR106C	YTA12	P40341	825 aa		2.58	□□□□□ -2
YKU80	YMR106C	ATF1	P40353	525 aa		2.58	□□□□□ -2
YKU80	YMR106C	DPH1	P40487	425 aa	Known RBP	2.58	□□□□□ -2
YKU80	YMR106C	FET5	P43561	622 aa		2.58	□□□□□ -2
YKU80	YMR106C	GCD14	P46959	383 aa	Predicted RBP	2.58	□□□□□ -2
YKU80	YMR106C	SNX4	P47057	423 aa		2.58	□□□□□ -2
YKU80	YMR106C	ZIP2	P53061	704 aa		2.58	□□□□□ -2
YKU80	YMR106C	LCL3	P53153	274 aa		2.58	□□□□□ -2
YKU80	YMR106C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
YKU80	YMR106C	MNT4	P53745	580 aa		2.58	□□□□□ -2
YKU80	YMR106C	YNL146W	P53906	100 aa		2.58	□□□□□ -2
YKU80	YMR106C	KTR6	P54070	446 aa		2.58	□□□□□ -2
YKU80	YMR106C	OAZ1	Q02803	292 aa		2.58	□□□□□ -2
YKU80	YMR106C	SRT1	Q03175	343 aa		2.58	□□□□□ -2
YKU80	YMR106C	SSL1	Q04673	461 aa	Predicted RBP	2.58	□□□□□ -2
YKU80	YMR106C	MFB1	Q04922	465 aa		2.58	□□□□□ -2
YKU80	YMR106C	RTT103	Q05543	409 aa		2.58	□□□□□ -2
YKU80	YMR106C	HRQ1	Q05549	1077 aa		2.58	□□□□□ -2
YKU80	YMR106C	SPH1	Q06160	661 aa		2.58	□□□□□ -2
YKU80	YMR106C	DNL4	Q08387	944 aa	Predicted RBP	2.58	□□□□□ -2
YKU80	YMR106C	FMP40	Q08968	688 aa	Predicted RBP	2.58	□□□□□ -2
YKU80	YMR106C	VIK1	Q12045	647 aa		2.58	□□□□□ -2
YKU80	YMR106C	RPS9A	O13516	197 aa	Known RBP	2.58	□□□□□ -2
YKU80	YMR106C	RPS9B	P05755	195 aa	Known RBP	2.58	□□□□□ -2
YKU80	YMR106C	PRB1	P09232	635 aa		2.58	□□□□□ -2
YKU80	YMR106C	EFT1	P32324	842 aa	Known RBP	2.58	□□□□□ -2
YKU80	YMR106C	HEM12	P32347	362 aa	Predicted RBP	2.58	□□□□□ -2
YKU80	YMR106C	NGG1	P32494	702 aa		2.58	□□□□□ -2
YKU80	YMR106C	YKL151C	P36059	337 aa		2.58	□□□□□ -2
YKU80	YMR106C	SEC31	P38968	1273 aa	Known RBP	2.58	□□□□□ -2
YKU80	YMR106C	OAF1	P39720	1047 aa	Predicted RBP	2.58	□□□□□ -2
YKU80	YMR106C	NPR2	P39923	615 aa		2.58	□□□□□ -2
YKU80	YMR106C	UBP7	P40453	1071 aa		2.58	□□□□□ -2
YKU80	YMR106C	PHB1	P40961	287 aa		2.58	□□□□□ -2
YKU80	YMR106C	HFM1	P51979	1187 aa		2.58	□□□□□ -2
YKU80	YMR106C	MNT2	P53059	558 aa		2.58	□□□□□ -2
YKU80	YMR106C	MTC3	P53077	123 aa		2.58	□□□□□ -2
YKU80	YMR106C	SNO2	P53823	222 aa		2.58	□□□□□ -2
YKU80	YMR106C	ESBP6	P53918	673 aa		2.58	□□□□□ -2
YKU80	YMR106C	NOP15	P53927	220 aa	Predicted RBP	2.58	□□□□□ -2
YKU80	YMR106C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
YKU80	YMR106C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
YKU80	YMR106C	EGD1	Q02642	157 aa	Known RBP	2.58	□□□□□ -2
YKU80	YMR106C	FCP1	Q03254	732 aa		2.58	□□□□□ -2
YKU80	YMR106C	SEG1	Q04279	960 aa		2.58	□□□□□ -2
YKU80	YMR106C	URC2	Q04411	772 aa		2.58	□□□□□ -2
YKU80	YMR106C	GTB1	Q04924	702 aa		2.58	□□□□□ -2
YKU80	YMR106C	RBS1	Q05672	457 aa	Known RBP	2.58	□□□□□ -2
YKU80	YMR106C	BOP2	Q06150	570 aa		2.58	□□□□□ -2
YKU80	YMR106C	SEC10	Q06245	871 aa		2.58	□□□□□ -2
YKU80	YMR106C	BCP1	Q06338	283 aa		2.58	□□□□□ -2
YKU80	YMR106C	VAC14	Q06708	880 aa		2.58	□□□□□ -2
YKU80	YMR106C	DSE3	Q08729	430 aa		2.58	□□□□□ -2
YKU80	YMR106C	YOL114C	Q12322	202 aa		2.58	□□□□□ -2
YKU80	YMR106C	NOT5	Q12514	560 aa	Predicted RBP	2.58	□□□□□ -2
YKU80	YMR106C	LSO2	Q3E772	92 aa	Known RBP	2.58	□□□□□ -2
YKU80	YMR106C	DFG16	Q99234	619 aa		2.58	□□□□□ -2
YKU80	YMR106C	RTC1	Q08281	1341 aa		2.57	□□□□□ -2
YKU80	YMR106C	RPP2A	P05319	106 aa	Known RBP	2.57	□□□□□ -2
YKU80	YMR106C	MET17	P06106	444 aa		2.57	□□□□□ -2
YKU80	YMR106C	ADE3	P07245	946 aa	Known RBP	2.57	□□□□□ -2
YKU80	YMR106C	ARG80	P07249	177 aa		2.57	□□□□□ -2
YKU80	YMR106C	CDC42	P19073	191 aa		2.57	□□□□□ -2
YKU80	YMR106C	RDS1	P25611	832 aa		2.57	□□□□□ -2
YKU80	YMR106C	ADK2	P26364	225 aa		2.57	□□□□□ -2
YKU80	YMR106C	PHO91	P27514	894 aa		2.57	□□□□□ -2
YKU80	YMR106C	URA7	P28274	579 aa	Known RBP	2.57	□□□□□ -2
YKU80	YMR106C	HBS1	P32769	611 aa	Known RBP	2.57	□□□□□ -2
YKU80	YMR106C	YKR015C	P36111	568 aa		2.57	□□□□□ -2
YKU80	YMR106C	NUP133	P36161	1157 aa		2.57	□□□□□ -2
YKU80	YMR106C	SHM2	P37291	469 aa	Known RBP	2.57	□□□□□ -2
YKU80	YMR106C	YHR054C	P38780	354 aa		2.57	□□□□□ -2
YKU80	YMR106C	AGE2	P40529	298 aa		2.57	□□□□□ -2
YKU80	YMR106C	APS3	P47064	194 aa		2.57	□□□□□ -2
YKU80	YMR106C	PGA2	P53903	129 aa		2.57	□□□□□ -2
YKU80	YMR106C	MUK1	Q02866	612 aa		2.57	□□□□□ -2
YKU80	YMR106C	VPS60	Q03390	229 aa		2.57	□□□□□ -2
YKU80	YMR106C	SIZ1	Q04195	904 aa		2.57	□□□□□ -2
YKU80	YMR106C	GMC2	Q06201	188 aa		2.57	□□□□□ -2
YKU80	YMR106C	TRM8	Q12009	286 aa		2.57	□□□□□ -2
YKU80	YMR106C	YTM1	Q12024	460 aa	Predicted RBP	2.57	□□□□□ -2
YKU80	YMR106C	TGL5	Q12043	749 aa		2.57	□□□□□ -2
YKU80	YMR106C	ATG29	Q12092	213 aa		2.57	□□□□□ -2
YKU80	YMR106C	CHS5	Q12114	671 aa	Known RBP	2.57	□□□□□ -2
YKU80	YMR106C	HER1	Q12276	1246 aa		2.57	□□□□□ -2
YKU80	YMR106C	RTN2	Q12443	393 aa		2.57	□□□□□ -2
YKU80	YMR106C	HBN1	Q96VH4	193 aa		2.57	□□□□□ -2
YKU80	YMR106C	GAL7	P08431	366 aa		2.56	□□□□□ -2
YKU80	YMR106C	DSF1	P0CX08	502 aa		2.56	□□□□□ -2
YKU80	YMR106C	YNR073C	P0CX09	502 aa		2.56	□□□□□ -2
YKU80	YMR106C	PRP2	P20095	876 aa	Predicted RBP	2.56	□□□□□ -2
YKU80	YMR106C	SFL1	P20134	766 aa		2.56	□□□□□ -2
YKU80	YMR106C	OLE1	P21147	510 aa	Known RBP	2.56	□□□□□ -2
YKU80	YMR106C	OSM1	P21375	501 aa	Known RBP	2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms