RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W CTM1P38818 585 aa3.75□□□□□ -1.81
LCB5YLR260W UBP7P40453 1071 aa3.75□□□□□ -1.81
LCB5YLR260W SPO22P40511 975 aa3.75□□□□□ -1.81
LCB5YLR260W YGR035CP53222 116 aa3.75□□□□□ -1.81
LCB5YLR260W YGR130CP53278 816 aa3.75□□□□□ -1.81
LCB5YLR260W SOK2P53438 785 aaPredicted RBP3.75□□□□□ -1.81
LCB5YLR260W YPL107WQ02873 248 aa3.75□□□□□ -1.81
LCB5YLR260W PDH1Q12428 516 aaKnown RBP3.75□□□□□ -1.81
LCB5YLR260W RTN2Q12443 393 aa3.75□□□□□ -1.81
LCB5YLR260W YLR422WQ06409 1932 aa3.74□□□□□ -1.81
LCB5YLR260W RPL5P26321 297 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W CCR4P31384 837 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W BMH2P34730 273 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W TVP38P36164 337 aa3.74□□□□□ -1.81
LCB5YLR260W IFA38P38286 347 aa3.74□□□□□ -1.81
LCB5YLR260W YEL025CP39991 1188 aa3.74□□□□□ -1.81
LCB5YLR260W PUG1P40100 303 aa3.74□□□□□ -1.81
LCB5YLR260W ULP2P40537 1034 aaPredicted RBP3.74□□□□□ -1.81
LCB5YLR260W ARF3P40994 183 aaRIP-Chip data3.74□□□□□ -1.81not detected
LCB5YLR260W CCT7P42943 550 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W BNA2P47125 453 aa3.74□□□□□ -1.81
LCB5YLR260W YGR283CP53336 341 aaPredicted RBP3.74□□□□□ -1.81
LCB5YLR260W YNR068CP53754 272 aa3.74□□□□□ -1.81
LCB5YLR260W HAS1Q03532 505 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W YHM2Q04013 314 aa3.74□□□□□ -1.81
LCB5YLR260W HFI1Q12060 488 aa3.74□□□□□ -1.81
LCB5YLR260W RPS21BQ3E754 87 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W ILV1P00927 576 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W HTS1P07263 546 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W SNA3P14359 133 aa3.74□□□□□ -1.81
LCB5YLR260W KAR3P17119 729 aa3.74□□□□□ -1.81
LCB5YLR260W DBP5P20449 482 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W UBC1P21734 215 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W YCK2P23292 546 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W PHO3P24031 467 aa3.74□□□□□ -1.81
LCB5YLR260W RSC6P25632 483 aa3.74□□□□□ -1.81
LCB5YLR260W PUP2P32379 260 aa3.74□□□□□ -1.81
LCB5YLR260W NIP1P32497 812 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W MIC60P36112 540 aa3.74□□□□□ -1.81
LCB5YLR260W POA1P38218 177 aa3.74□□□□□ -1.81
LCB5YLR260W YHR202WP38887 602 aa3.74□□□□□ -1.81
LCB5YLR260W BUD16P39988 312 aa3.74□□□□□ -1.81
LCB5YLR260W NEO1P40527 1151 aa3.74□□□□□ -1.81
LCB5YLR260W NAS2P40555 220 aa3.74□□□□□ -1.81
LCB5YLR260W ZIM17P42844 174 aa3.74□□□□□ -1.81
LCB5YLR260W AIP1P46680 615 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W NOP9P47077 666 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W NUP84P52891 726 aa3.74□□□□□ -1.81
LCB5YLR260W SGF73P53165 657 aa3.74□□□□□ -1.81
LCB5YLR260W NNF2P53253 936 aa3.74□□□□□ -1.81
LCB5YLR260W YNR061CP53747 219 aa3.74□□□□□ -1.81
LCB5YLR260W DSE4P53753 1117 aa3.74□□□□□ -1.81
LCB5YLR260W YML119WQ03208 357 aa3.74□□□□□ -1.81
LCB5YLR260W LCD1Q04377 747 aa3.74□□□□□ -1.81
LCB5YLR260W CRD1Q07560 283 aa3.74□□□□□ -1.81
LCB5YLR260W RUD3Q12234 484 aaKnown RBP3.74□□□□□ -1.81
LCB5YLR260W PRP28P23394 588 aa3.73□□□□□ -1.81
LCB5YLR260W AFR1P33304 620 aa3.73□□□□□ -1.81
LCB5YLR260W OAF3P36023 863 aa3.73□□□□□ -1.81
LCB5YLR260W PGM2P37012 569 aaKnown RBP3.73□□□□□ -1.81
LCB5YLR260W FAT1P38225 669 aa3.73□□□□□ -1.81
LCB5YLR260W ALG14P38242 237 aa3.73□□□□□ -1.81
LCB5YLR260W EXO5P38289 585 aa3.73□□□□□ -1.81
LCB5YLR260W SAW1P39735 261 aa3.73□□□□□ -1.81
LCB5YLR260W YER034WP40022 185 aaKnown RBP3.73□□□□□ -1.81
LCB5YLR260W JHD1P40034 492 aa3.73□□□□□ -1.81
LCB5YLR260W GIP2P40036 548 aa3.73□□□□□ -1.81
LCB5YLR260W OSW5P40219 148 aa3.73□□□□□ -1.81
LCB5YLR260W CTF18P49956 741 aa3.73□□□□□ -1.81
LCB5YLR260W YKE2P52553 114 aa3.73□□□□□ -1.81
LCB5YLR260W ARP5P53946 755 aa3.73□□□□□ -1.81
LCB5YLR260W ADA2Q02336 434 aa3.73□□□□□ -1.81
LCB5YLR260W OAZ1Q02803 292 aa3.73□□□□□ -1.81
LCB5YLR260W RRN5Q02983 363 aa3.73□□□□□ -1.81
LCB5YLR260W GYL1Q04322 720 aa3.73□□□□□ -1.81
LCB5YLR260W ATG38Q05789 226 aaKnown RBP3.73□□□□□ -1.81
LCB5YLR260W SLP1Q12232 587 aa3.73□□□□□ -1.81
LCB5YLR260W PGK1P00560 416 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W TY1A-LR4P0C2I8 440 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W TY1A-DR6P0CX70 440 aa3.72□□□□□ -1.81
LCB5YLR260W TY1A-ER1P0CX71 440 aa3.72□□□□□ -1.81
LCB5YLR260W TY1A-LR2P0CX72 440 aa3.72□□□□□ -1.81
LCB5YLR260W TY1A-PLP0CX73 440 aa3.72□□□□□ -1.81
LCB5YLR260W TY1A-JR1P0CX74 440 aa3.72□□□□□ -1.81
LCB5YLR260W TY1A-LR3P0CX75 440 aa3.72□□□□□ -1.81
LCB5YLR260W TY1A-ML2P0CX76 440 aa3.72□□□□□ -1.81
LCB5YLR260W LAT1P12695 482 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W ADK2P26364 225 aa3.72□□□□□ -1.81
LCB5YLR260W SSE1P32589 693 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W VPS17P32913 551 aa3.72□□□□□ -1.81
LCB5YLR260W STL1P39932 569 aa3.72□□□□□ -1.81
LCB5YLR260W EAF5P39995 279 aa3.72□□□□□ -1.81
LCB5YLR260W HMF1P40037 129 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W TED1P40533 473 aa3.72□□□□□ -1.81
LCB5YLR260W MPH1P40562 993 aa3.72□□□□□ -1.81
LCB5YLR260W YJR039WP47107 1121 aa3.72□□□□□ -1.81
LCB5YLR260W INP52P50942 1183 aa3.72□□□□□ -1.81
LCB5YLR260W SAP4P53036 818 aa3.72□□□□□ -1.81
LCB5YLR260W RET3P53600 189 aa3.72□□□□□ -1.81
LCB5YLR260W PNG1Q02890 363 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms