RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C VPS29P38759 282 aa2.41□□□□□ -2.02
VPS13YLL040C STB1P42845 420 aa2.41□□□□□ -2.02
VPS13YLL040C YPT32P51996 222 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C IMP4P53941 290 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C YPL216WQ08964 1102 aa2.41□□□□□ -2.02
VPS13YLL040C FRT1Q99332 602 aa2.41□□□□□ -2.02
VPS13YLL040C MOD5P07884 428 aa2.41□□□□□ -2.02
VPS13YLL040C ASN1P49089 572 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C TFC8Q12308 588 aa2.41□□□□□ -2.02
VPS13YLL040C ILV1P00927 576 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C BCY1P07278 416 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C CLB2P24869 491 aa2.41□□□□□ -2.02
VPS13YLL040C YHR045WP38775 560 aa2.41□□□□□ -2.02
VPS13YLL040C MEF2P39677 819 aa2.41□□□□□ -2.02
VPS13YLL040C SYG1P40528 902 aa2.41□□□□□ -2.02
VPS13YLL040C LSG1P53145 640 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C RTT102P53330 157 aa2.41□□□□□ -2.02
VPS13YLL040C HSP31Q04432 237 aa2.41□□□□□ -2.02
VPS13YLL040C SDH5Q08230 162 aa2.41□□□□□ -2.02
VPS13YLL040C ULA1Q12059 462 aa2.41□□□□□ -2.02
VPS13YLL040C PMA1P05030 918 aaKnown RBP2.4□□□□□ -2.02
VPS13YLL040C ERR1P0CX10 437 aa2.4□□□□□ -2.02
VPS13YLL040C ERR2P0CX11 437 aa2.4□□□□□ -2.02
VPS13YLL040C CMP2P14747 604 aa2.4□□□□□ -2.02
VPS13YLL040C SLY1P22213 666 aa2.4□□□□□ -2.02
VPS13YLL040C CNA1P23287 553 aa2.4□□□□□ -2.02
VPS13YLL040C SAT4P25333 603 aaKnown RBP2.4□□□□□ -2.02
VPS13YLL040C SSE1P32589 693 aaKnown RBP2.4□□□□□ -2.02
VPS13YLL040C MAM33P40513 266 aa2.4□□□□□ -2.02
VPS13YLL040C ERR3P42222 437 aa2.4□□□□□ -2.02
VPS13YLL040C RPN11P43588 306 aaKnown RBP2.4□□□□□ -2.02
VPS13YLL040C CNN1P43618 361 aa2.4□□□□□ -2.02
VPS13YLL040C YGL036WP53185 909 aaPredicted RBP2.4□□□□□ -2.02
VPS13YLL040C SMA1Q02651 245 aa2.4□□□□□ -2.02
VPS13YLL040C YLR053CQ12026 108 aa2.4□□□□□ -2.02
VPS13YLL040C NSI1Q12457 570 aa2.4□□□□□ -2.02
VPS13YLL040C HYM1P32464 399 aa2.4□□□□□ -2.02
VPS13YLL040C SLA1P32790 1244 aa2.4□□□□□ -2.02
VPS13YLL040C HCS1P34243 683 aa2.4□□□□□ -2.02
VPS13YLL040C MDJ1P35191 511 aa2.4□□□□□ -2.02
VPS13YLL040C STB6P36085 766 aa2.4□□□□□ -2.02
VPS13YLL040C ATG12P38316 186 aa2.4□□□□□ -2.02
VPS13YLL040C APM2P38700 605 aa2.4□□□□□ -2.02
VPS13YLL040C TFG1P41895 735 aaPredicted RBP2.4□□□□□ -2.02
VPS13YLL040C SPR3P41901 512 aa2.4□□□□□ -2.02
VPS13YLL040C YJR098CP47139 656 aa2.4□□□□□ -2.02
VPS13YLL040C MCM6P53091 1017 aaKnown RBP2.4□□□□□ -2.02
VPS13YLL040C RRT6P53117 311 aaPredicted RBP2.4□□□□□ -2.02
VPS13YLL040C USE1P53146 245 aa2.4□□□□□ -2.02
VPS13YLL040C YNL095CP53932 642 aa2.4□□□□□ -2.02
VPS13YLL040C ENT5Q03769 411 aaKnown RBP2.4□□□□□ -2.02
VPS13YLL040C URC2Q04411 772 aa2.4□□□□□ -2.02
VPS13YLL040C JIP5Q06214 492 aaPredicted RBP2.4□□□□□ -2.02
VPS13YLL040C VPS54Q12071 889 aa2.4□□□□□ -2.02
VPS13YLL040C RHO2P06781 192 aa2.4□□□□□ -2.03
VPS13YLL040C ECM4P36156 370 aa2.4□□□□□ -2.03
VPS13YLL040C EXG2P52911 562 aa2.4□□□□□ -2.03
VPS13YLL040C YML131WQ03102 365 aa2.4□□□□□ -2.03
VPS13YLL040C GPI17Q04080 534 aa2.4□□□□□ -2.03
VPS13YLL040C PNP1Q05788 311 aa2.4□□□□□ -2.03
VPS13YLL040C HDA3Q06623 655 aa2.4□□□□□ -2.03
VPS13YLL040C TPO1Q07824 586 aa2.4□□□□□ -2.03
VPS13YLL040C SIA1Q12212 622 aa2.4□□□□□ -2.03
VPS13YLL040C SFG1Q12507 346 aa2.4□□□□□ -2.03
VPS13YLL040C YSP3P25036 478 aa2.4□□□□□ -2.03
VPS13YLL040C URA10P30402 227 aa2.4□□□□□ -2.03
VPS13YLL040C CDC3P32457 520 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C KAR9P32526 644 aa2.4□□□□□ -2.03
VPS13YLL040C PEP7P32609 515 aa2.4□□□□□ -2.03
VPS13YLL040C YBR285WP38354 144 aa2.4□□□□□ -2.03
VPS13YLL040C SFB3P38810 929 aa2.4□□□□□ -2.03
VPS13YLL040C ERP5P38819 212 aa2.4□□□□□ -2.03
VPS13YLL040C SSP1P38871 571 aa2.4□□□□□ -2.03
VPS13YLL040C CKB2P38930 258 aa2.4□□□□□ -2.03
VPS13YLL040C YER034WP40022 185 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C YJR142WP47173 342 aa2.4□□□□□ -2.03
VPS13YLL040C INP52P50942 1183 aa2.4□□□□□ -2.03
VPS13YLL040C YGL081WP53156 320 aa2.4□□□□□ -2.03
VPS13YLL040C NOG1Q02892 647 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C VHS1Q03785 461 aa2.4□□□□□ -2.03
VPS13YLL040C TUF1P02992 437 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C CMD1P06787 147 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C DPB2P24482 689 aaPredicted RBP2.4□□□□□ -2.03
VPS13YLL040C MTW1P39731 289 aa2.4□□□□□ -2.03
VPS13YLL040C HAT2P39984 401 aa2.4□□□□□ -2.03
VPS13YLL040C SET4P42948 560 aa2.4□□□□□ -2.03
VPS13YLL040C MRM2P53123 320 aa2.4□□□□□ -2.03
VPS13YLL040C SMD2Q06217 110 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C NSE1Q07913 336 aa2.4□□□□□ -2.03
VPS13YLL040C YLL054CQ12244 843 aa2.4□□□□□ -2.03
VPS13YLL040C RTN2Q12443 393 aa2.4□□□□□ -2.03
VPS13YLL040C SAS5Q99314 248 aa2.4□□□□□ -2.03
VPS13YLL040C AI4P03878 556 aa2.4□□□□□ -2.03
VPS13YLL040C REC107P21651 314 aa2.4□□□□□ -2.03
VPS13YLL040C SEC66P33754 206 aa2.4□□□□□ -2.03
VPS13YLL040C MPS3P47069 682 aa2.4□□□□□ -2.03
VPS13YLL040C STR3P53101 465 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C RKM1Q08961 583 aaPredicted RBP2.4□□□□□ -2.03
VPS13YLL040C RGS2Q99188 309 aa2.4□□□□□ -2.03
VPS13YLL040C ECM3Q99252 613 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 97.1 ms