RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C IML2P47031 731 aa10.28□□□□□ -0.76
YSR3YKR053C SPC105P53148 917 aa10.28□□□□□ -0.76
YSR3YKR053C YPR003CP53394 754 aa10.28□□□□□ -0.76
YSR3YKR053C TEP1P53916 434 aa10.28□□□□□ -0.76
YSR3YKR053C NMA111P53920 997 aa10.28□□□□□ -0.76
YSR3YKR053C ARP9Q05123 467 aa10.28□□□□□ -0.76
YSR3YKR053C SAM4Q08985 325 aaKnown RBP10.28□□□□□ -0.76
YSR3YKR053C AIM41Q12032 185 aa10.28□□□□□ -0.76
YSR3YKR053C AVL9Q12500 764 aa10.28□□□□□ -0.76
YSR3YKR053C LEU1P07264 779 aaKnown RBP10.27□□□□□ -0.77
YSR3YKR053C YKL151CP36059 337 aa10.27□□□□□ -0.77
YSR3YKR053C COG7P53195 279 aa10.27□□□□□ -0.77
YSR3YKR053C TIM13P53299 105 aa10.27□□□□□ -0.77
YSR3YKR053C GND2P53319 492 aa10.27□□□□□ -0.77
YSR3YKR053C SIW14P53965 281 aa10.27□□□□□ -0.77
YSR3YKR053C YMR178WQ03219 274 aaKnown RBP10.27□□□□□ -0.77
YSR3YKR053C PPN1Q04119 674 aa10.27□□□□□ -0.77
YSR3YKR053C ECI1Q05871 280 aa10.27□□□□□ -0.77
YSR3YKR053C YOR338WQ99326 363 aa10.27□□□□□ -0.77
YSR3YKR053C QCR6P00127 147 aa10.26□□□□□ -0.77
YSR3YKR053C ACO1P19414 778 aaKnown RBP RIP-Chip data10.26□□□□□ -0.77not detected
YSR3YKR053C PAP1P29468 568 aaKnown RBP10.26□□□□□ -0.77
YSR3YKR053C MSG5P38590 489 aa10.26□□□□□ -0.77
YSR3YKR053C CDC14Q00684 551 aa10.26□□□□□ -0.77
YSR3YKR053C RSC4Q02206 625 aa10.26□□□□□ -0.77
YSR3YKR053C RLI1Q03195 608 aaKnown RBP10.26□□□□□ -0.77
YSR3YKR053C RPC11Q04307 110 aaPredicted RBP10.26□□□□□ -0.77
YSR3YKR053C YDL129WQ07555 291 aa10.26□□□□□ -0.77
YSR3YKR053C RBK1P25332 333 aa10.25□□□□□ -0.77
YSR3YKR053C PMI40P29952 429 aaKnown RBP10.25□□□□□ -0.77
YSR3YKR053C SCD5P34758 872 aa10.25□□□□□ -0.77
YSR3YKR053C MSR1P38714 643 aa10.25□□□□□ -0.77
YSR3YKR053C PFS1P38872 237 aa10.25□□□□□ -0.77
YSR3YKR053C SMF1P38925 575 aa10.25□□□□□ -0.77
YSR3YKR053C NDC80P40460 691 aa10.25□□□□□ -0.77
YSR3YKR053C RPL34BP40525 121 aaKnown RBP10.25□□□□□ -0.77
YSR3YKR053C PIN2Q12057 282 aa10.25□□□□□ -0.77
YSR3YKR053C PUF4P25339 888 aaKnown RBP RIP-Chip data10.24□□□□□ -0.77 RIP-Chip
YSR3YKR053C BRF1P29056 596 aa10.24□□□□□ -0.77
YSR3YKR053C HEM12P32347 362 aaPredicted RBP10.24□□□□□ -0.77
YSR3YKR053C UTR2P32623 467 aa10.24□□□□□ -0.77
YSR3YKR053C TFA2P36145 328 aa10.24□□□□□ -0.77
YSR3YKR053C MAD1P40957 749 aa10.24□□□□□ -0.77
YSR3YKR053C SET2P46995 733 aaKnown RBP10.24□□□□□ -0.77
YSR3YKR053C REG1Q00816 1014 aa10.24□□□□□ -0.77
YSR3YKR053C YPL113CQ02961 396 aa10.24□□□□□ -0.77
YSR3YKR053C YDR131CQ03899 556 aa10.24□□□□□ -0.77
YSR3YKR053C HOS1Q12214 470 aa10.24□□□□□ -0.77
YSR3YKR053C MCM16Q12262 181 aa10.24□□□□□ -0.77
YSR3YKR053C NAG1Q8TGN9 163 aa10.24□□□□□ -0.77
YSR3YKR053C Q0182Q9ZZW1 134 aa10.24□□□□□ -0.77
YSR3YKR053C COX3P00420 269 aa10.23□□□□□ -0.77
YSR3YKR053C CDC24P11433 854 aaPredicted RBP10.23□□□□□ -0.77
YSR3YKR053C POL30P15873 258 aaKnown RBP10.23□□□□□ -0.77
YSR3YKR053C CLN1P20437 546 aa10.23□□□□□ -0.77
YSR3YKR053C EMC1P25574 760 aa10.23□□□□□ -0.77
YSR3YKR053C AEP1P32493 518 aa10.23□□□□□ -0.77
YSR3YKR053C SLX5P32828 619 aaKnown RBP10.23□□□□□ -0.77
YSR3YKR053C SLD2P34252 453 aa10.23□□□□□ -0.77
YSR3YKR053C POP4P38336 279 aa10.23□□□□□ -0.77
YSR3YKR053C LRP1P38801 184 aaKnown RBP10.23□□□□□ -0.77
YSR3YKR053C TIF34P40217 347 aaKnown RBP10.23□□□□□ -0.77
YSR3YKR053C MTO1P53070 669 aa10.23□□□□□ -0.77
YSR3YKR053C COG1P53079 417 aa10.23□□□□□ -0.77
YSR3YKR053C PCL10P53124 433 aa10.23□□□□□ -0.77
YSR3YKR053C YNL143CP53908 130 aa10.23□□□□□ -0.77
YSR3YKR053C MPC54Q08550 464 aa10.23□□□□□ -0.77
YSR3YKR053C GNT1Q12096 491 aa10.23□□□□□ -0.77
YSR3YKR053C FRT1Q99332 602 aa10.23□□□□□ -0.77
YSR3YKR053C IMA3P0CW40 589 aa10.22□□□□□ -0.77
YSR3YKR053C IMA4P0CW41 589 aa10.22□□□□□ -0.77
YSR3YKR053C TSR4P25040 408 aa10.22□□□□□ -0.77
YSR3YKR053C DCC1P25559 380 aa10.22□□□□□ -0.77
YSR3YKR053C NDI1P32340 513 aa10.22□□□□□ -0.77
YSR3YKR053C GCD6P32501 712 aaKnown RBP10.22□□□□□ -0.77
YSR3YKR053C SRP101P32916 621 aa10.22□□□□□ -0.77
YSR3YKR053C YJL070CP40361 888 aa10.22□□□□□ -0.77
YSR3YKR053C MNN10P50108 393 aaKnown RBP10.22□□□□□ -0.77
YSR3YKR053C RPL22BP56628 122 aaKnown RBP10.22□□□□□ -0.77
YSR3YKR053C URH1Q04179 340 aa10.22□□□□□ -0.77
YSR3YKR053C GSF2Q04697 403 aaKnown RBP10.22□□□□□ -0.77
YSR3YKR053C CDC73Q06697 393 aa10.22□□□□□ -0.77
YSR3YKR053C IMA2Q08295 589 aa10.22□□□□□ -0.77
YSR3YKR053C SUC2P00724 532 aa10.21□□□□□ -0.77
YSR3YKR053C ERR1P0CX10 437 aa10.21□□□□□ -0.77
YSR3YKR053C ERR2P0CX11 437 aa10.21□□□□□ -0.77
YSR3YKR053C YSP3P25036 478 aa10.21□□□□□ -0.77
YSR3YKR053C GCG1P32656 232 aaKnown RBP10.21□□□□□ -0.77
YSR3YKR053C IRS4P36115 615 aaKnown RBP10.21□□□□□ -0.77
YSR3YKR053C TAE1P38340 232 aa10.21□□□□□ -0.77
YSR3YKR053C RPH1P39956 796 aa10.21□□□□□ -0.77
YSR3YKR053C ERR3P42222 437 aa10.21□□□□□ -0.77
YSR3YKR053C CSN12P47130 423 aa10.21□□□□□ -0.77
YSR3YKR053C SAP4P53036 818 aa10.21□□□□□ -0.77
YSR3YKR053C VAC7P53950 1165 aa10.21□□□□□ -0.77
YSR3YKR053C UTP6Q02354 440 aaKnown RBP10.21□□□□□ -0.77
YSR3YKR053C VTI1Q04338 217 aa10.21□□□□□ -0.77
YSR3YKR053C UBA1P22515 1024 aaKnown RBP10.2□□□□□ -0.78
YSR3YKR053C YEL043WP32618 956 aa10.2□□□□□ -0.78
YSR3YKR053C YBP1P38315 674 aa10.2□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms