RNA–Protein interactions for RNA: YDR422C

SIP1, Transcript of Alternate beta-subunit of the Snf1p kinase complex, yeast

Gene SIP1, Length 2,448 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP1	YDR422C	YRF1-4	O13559	1382 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	STF1	P01098	86 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	PCK1	P10963	549 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	SUI2	P20459	304 aa	Known RBP	4.2	□□□□□ -1.74
SIP1	YDR422C	ATG19	P35193	415 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	MNN2	P38069	597 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	YHR112C	P38716	378 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	MEF2	P39677	819 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	SSY5	P47002	699 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	TAH11	P47112	604 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	EFM3	P47163	339 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	EXG2	P52911	562 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	KTR5	P53966	522 aa	Predicted RBP	4.2	□□□□□ -1.74
SIP1	YDR422C	VBA4	Q04602	768 aa	Known RBP	4.2	□□□□□ -1.74
SIP1	YDR422C	YPR196W	Q06595	470 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	ARR3	Q06598	404 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	SYT1	Q06836	1226 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	RRT8	Q08219	342 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	GPN2	Q08726	347 aa	Predicted RBP	4.2	□□□□□ -1.74
SIP1	YDR422C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SIP1	YDR422C	RFA1	P22336	621 aa	Known RBP	4.2	□□□□□ -1.74
SIP1	YDR422C	YCR051W	P25631	222 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	RPS7A	P26786	190 aa	Known RBP	4.2	□□□□□ -1.74
SIP1	YDR422C	MSS1	P32559	526 aa	Predicted RBP	4.2	□□□□□ -1.74
SIP1	YDR422C	POL12	P38121	705 aa	Predicted RBP	4.2	□□□□□ -1.74
SIP1	YDR422C	YHR033W	P38690	423 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	GET2	P40056	285 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	ARG5,6	Q01217	863 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	RPT6	Q01939	405 aa	Known RBP	4.2	□□□□□ -1.74
SIP1	YDR422C	FCP1	Q03254	732 aa		4.2	□□□□□ -1.74
SIP1	YDR422C	APL5	Q08951	932 aa	Known RBP	4.2	□□□□□ -1.74
SIP1	YDR422C	YSP3	P25036	478 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	NNK1	P36003	928 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	SAP190	P36123	1033 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	CTM1	P38818	585 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	UME6	P39001	836 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	SLZ1	P40167	298 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	YIL108W	P40483	696 aa	Known RBP	4.19	□□□□□ -1.74
SIP1	YDR422C	MNP1	P53163	194 aa	Predicted RBP	4.19	□□□□□ -1.74
SIP1	YDR422C	CUL3	P53202	744 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	LSC2	P53312	427 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	TNA1	P53322	534 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	TAP42	Q04372	366 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	MSC3	Q05812	728 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	PEX19	Q07418	342 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	RTT109	Q07794	436 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	YEH1	Q07804	573 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SIP1	YDR422C	SPB1	P25582	841 aa	Predicted RBP	4.19	□□□□□ -1.74
SIP1	YDR422C	LRG1	P35688	1017 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	MSS4	P38994	779 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	CAB2	P40506	365 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	PKP1	P40530	394 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	MSC2	Q03455	724 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	DIB1	Q06819	143 aa	Predicted RBP	4.19	□□□□□ -1.74
SIP1	YDR422C	YOR223W	Q12015	292 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	YDR461C-A	Q2V2P7	80 aa		4.19	□□□□□ -1.74
SIP1	YDR422C	HRP1	Q99383	534 aa	Known RBP	4.19	□□□□□ -1.74
SIP1	YDR422C	YML003W	P0CF16	290 aa		4.18	□□□□□ -1.74
SIP1	YDR422C	GEX1	P25596	615 aa		4.18	□□□□□ -1.74
SIP1	YDR422C	RPC82	P32349	654 aa		4.18	□□□□□ -1.74
SIP1	YDR422C	WBP1	P33767	430 aa	Known RBP	4.18	□□□□□ -1.74
SIP1	YDR422C	WHI3	P34761	661 aa	Known RBP	4.18	□□□□□ -1.74
SIP1	YDR422C	TAF5	P38129	798 aa		4.18	□□□□□ -1.74
SIP1	YDR422C	SHE10	P53075	577 aa		4.18	□□□□□ -1.74
SIP1	YDR422C	EFR3	Q03653	782 aa	Known RBP	4.18	□□□□□ -1.74
SIP1	YDR422C	TPP1	Q03796	238 aa		4.18	□□□□□ -1.74
SIP1	YDR422C	PPN1	Q04119	674 aa		4.18	□□□□□ -1.74
SIP1	YDR422C	ECM18	Q04623	453 aa		4.18	□□□□□ -1.74
SIP1	YDR422C	YLR456W	Q06199	204 aa		4.18	□□□□□ -1.74
SIP1	YDR422C	RCN2	Q12044	265 aa		4.18	□□□□□ -1.74
SIP1	YDR422C	TY1A-NL1	Q12391	440 aa	Known RBP	4.18	□□□□□ -1.74
SIP1	YDR422C	YOR019W	Q99248	730 aa		4.18	□□□□□ -1.74
SIP1	YDR422C	LPD1	P09624	499 aa	Known RBP	4.17	□□□□□ -1.74
SIP1	YDR422C	PYC1	P11154	1178 aa	Known RBP	4.17	□□□□□ -1.74
SIP1	YDR422C	PDC5	P16467	563 aa	Known RBP	4.17	□□□□□ -1.74
SIP1	YDR422C	PRP28	P23394	588 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	APN2	P38207	520 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	RRT2	P38332	387 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	RFC3	P38629	340 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	MLH1	P38920	769 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	ELO3	P40319	345 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	KAP95	Q06142	861 aa	Known RBP	4.17	□□□□□ -1.74
SIP1	YDR422C	OPT2	Q06593	877 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	YPR172W	Q06608	200 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	YDL073W	Q07454	984 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	MDY2	Q12285	212 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	AFI1	Q99222	893 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	HNM1	P19807	563 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	SYN8	P31377	255 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	HXT3	P32466	567 aa	Known RBP	4.17	□□□□□ -1.74
SIP1	YDR422C	RPN2	P32565	945 aa	Known RBP	4.17	□□□□□ -1.74
SIP1	YDR422C	VPS17	P32913	551 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	NIP100	P33420	868 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	SEC66	P33754	206 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	AUR1	P36107	401 aa	Predicted RBP	4.17	□□□□□ -1.74
SIP1	YDR422C	YDR089W	P38966	869 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	SMC3	P47037	1230 aa		4.17	□□□□□ -1.74
SIP1	YDR422C	SQS1	P53866	767 aa	Known RBP	4.17	□□□□□ -1.74
SIP1	YDR422C	MCP2	Q06567	569 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms