RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W YKL107WP34251 309 aa5.15□□□□□ -1.59
SPT3YDR392W YKL151CP36059 337 aa5.15□□□□□ -1.59
SPT3YDR392W YBR056WP38081 501 aa5.15□□□□□ -1.59
SPT3YDR392W ECM21P38167 1117 aaKnown RBP5.15□□□□□ -1.59
SPT3YDR392W MOH1P38191 138 aa5.15□□□□□ -1.59
SPT3YDR392W YIL108WP40483 696 aaKnown RBP5.15□□□□□ -1.59
SPT3YDR392W GPD2P41911 440 aaKnown RBP5.15□□□□□ -1.59
SPT3YDR392W WAR1Q03631 944 aa5.15□□□□□ -1.59
SPT3YDR392W MDM38Q08179 573 aa5.15□□□□□ -1.59
SPT3YDR392W SGT2Q12118 346 aaKnown RBP5.15□□□□□ -1.59
SPT3YDR392W HSP42Q12329 375 aa5.15□□□□□ -1.59
SPT3YDR392W URA2P07259 2214 aaKnown RBP5.14□□□□□ -1.59
SPT3YDR392W FUN30P31380 1131 aa5.14□□□□□ -1.59
SPT3YDR392W ASF1P32447 279 aa5.14□□□□□ -1.59
SPT3YDR392W VID24P38263 362 aa5.14□□□□□ -1.59
SPT3YDR392W YGL176CP46945 554 aa5.14□□□□□ -1.59
SPT3YDR392W MRX6P48564 524 aa5.14□□□□□ -1.59
SPT3YDR392W SPO20Q04359 397 aa5.14□□□□□ -1.59
SPT3YDR392W POB3Q04636 552 aaKnown RBP5.14□□□□□ -1.59
SPT3YDR392W GUP2Q08929 609 aa5.14□□□□□ -1.59
SPT3YDR392W HUA2Q12134 243 aa5.14□□□□□ -1.59
SPT3YDR392W NCB2Q92317 146 aa5.14□□□□□ -1.59
SPT3YDR392W CDC24P11433 854 aaPredicted RBP5.13□□□□□ -1.59
SPT3YDR392W PSO2P30620 661 aa5.13□□□□□ -1.59
SPT3YDR392W MVD1P32377 396 aaKnown RBP5.13□□□□□ -1.59
SPT3YDR392W PET112P33893 541 aa5.13□□□□□ -1.59
SPT3YDR392W NMD2P38798 1089 aaKnown RBP5.13□□□□□ -1.59
SPT3YDR392W ELO1P39540 310 aa5.13□□□□□ -1.59
SPT3YDR392W URM1P40554 99 aaPredicted RBP5.13□□□□□ -1.59
SPT3YDR392W CEG1Q01159 459 aaPredicted RBP5.13□□□□□ -1.59
SPT3YDR392W YML122CQ03207 126 aa5.13□□□□□ -1.59
SPT3YDR392W MYO5Q04439 1219 aaKnown RBP5.13□□□□□ -1.59
SPT3YDR392W YDL218WQ07629 317 aa5.13□□□□□ -1.59
SPT3YDR392W SRO7Q12038 1033 aa5.13□□□□□ -1.59
SPT3YDR392W PIN4P34217 668 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
SPT3YDR392W TAF14P35189 244 aa5.12□□□□□ -1.59
SPT3YDR392W KTR3P38130 404 aaPredicted RBP5.12□□□□□ -1.59
SPT3YDR392W PRM6Q04705 352 aa5.12□□□□□ -1.59
SPT3YDR392W ECM7Q06200 448 aa5.12□□□□□ -1.59
SPT3YDR392W CLP1Q08685 445 aaPredicted RBP5.12□□□□□ -1.59
SPT3YDR392W NPC2Q12408 173 aa5.12□□□□□ -1.59
SPT3YDR392W RPS19AP07280 144 aaKnown RBP5.11□□□□□ -1.59
SPT3YDR392W RPS19BP07281 144 aaPredicted RBP5.11□□□□□ -1.59
SPT3YDR392W SBA1P28707 216 aaKnown RBP5.11□□□□□ -1.59
SPT3YDR392W SRP101P32916 621 aa5.11□□□□□ -1.59
SPT3YDR392W DSS1P39112 969 aa5.11□□□□□ -1.59
SPT3YDR392W FIS1P40515 155 aa5.11□□□□□ -1.59
SPT3YDR392W KRI1P42846 591 aaKnown RBP5.11□□□□□ -1.59
SPT3YDR392W YGL242CP53066 181 aa5.11□□□□□ -1.59
SPT3YDR392W CSI1Q04368 295 aa5.11□□□□□ -1.59
SPT3YDR392W MAK31P23059 88 aa5.1□□□□□ -1.59
SPT3YDR392W RPC82P32349 654 aa5.1□□□□□ -1.59
SPT3YDR392W RRP3P38712 501 aaKnown RBP5.1□□□□□ -1.59
SPT3YDR392W SPG5P42933 373 aa5.1□□□□□ -1.59
SPT3YDR392W ASE1P50275 885 aa5.1□□□□□ -1.59
SPT3YDR392W YNL146WP53906 100 aa5.1□□□□□ -1.59
SPT3YDR392W BSC6Q08280 497 aa5.1□□□□□ -1.59
SPT3YDR392W TPK1P06244 397 aa5.09□□□□□ -1.59
SPT3YDR392W CTP1P38152 299 aa5.09□□□□□ -1.59
SPT3YDR392W GIC1P38785 314 aa5.09□□□□□ -1.59
SPT3YDR392W SER33P40510 469 aa5.09□□□□□ -1.59
SPT3YDR392W CUL3P53202 744 aa5.09□□□□□ -1.59
SPT3YDR392W SNP1Q00916 300 aaPredicted RBP5.09□□□□□ -1.59
SPT3YDR392W PEX25Q02969 394 aa5.09□□□□□ -1.59
SPT3YDR392W INP2Q03824 705 aa5.09□□□□□ -1.59
SPT3YDR392W AAD4Q07747 329 aa5.09□□□□□ -1.59
SPT3YDR392W HER1Q12276 1246 aa5.09□□□□□ -1.59
SPT3YDR392W POL30P15873 258 aaKnown RBP5.08□□□□□ -1.6
SPT3YDR392W KAR4P25583 335 aa5.08□□□□□ -1.6
SPT3YDR392W PRR1P28708 518 aa5.08□□□□□ -1.6
SPT3YDR392W RSM22P36056 628 aa5.08□□□□□ -1.6
SPT3YDR392W SOL2P37262 315 aa5.08□□□□□ -1.6
SPT3YDR392W YBR225WP38321 900 aa5.08□□□□□ -1.6
SPT3YDR392W OSH3P38713 996 aaKnown RBP5.08□□□□□ -1.6
SPT3YDR392W SEC24P40482 926 aaKnown RBP5.08□□□□□ -1.6
SPT3YDR392W CFD1P40558 293 aa5.08□□□□□ -1.6
SPT3YDR392W NOP13P53883 403 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
SPT3YDR392W IES4Q08561 116 aa5.08□□□□□ -1.6
SPT3YDR392W GPM2Q12008 311 aa5.08□□□□□ -1.6
SPT3YDR392W CLN3P13365 580 aa5.07□□□□□ -1.6
SPT3YDR392W TKL2P33315 681 aa5.07□□□□□ -1.6
SPT3YDR392W SHE3P38272 425 aaKnown RBP5.07□□□□□ -1.6
SPT3YDR392W SHQ1P40486 507 aaPredicted RBP5.07□□□□□ -1.6
SPT3YDR392W YGR053CP53234 283 aa5.07□□□□□ -1.6
SPT3YDR392W RTT102P53330 157 aa5.07□□□□□ -1.6
SPT3YDR392W FDC1Q03034 503 aa5.07□□□□□ -1.6
SPT3YDR392W PRS5Q12265 496 aaKnown RBP5.07□□□□□ -1.6
SPT3YDR392W LAS17Q12446 633 aa5.07□□□□□ -1.6
SPT3YDR392W STT4P37297 1900 aa5.07□□□□□ -1.6
SPT3YDR392W SPT15P13393 240 aaKnown RBP5.06□□□□□ -1.6
SPT3YDR392W MMS4P38257 691 aa5.06□□□□□ -1.6
SPT3YDR392W CEP3P40969 608 aa5.06□□□□□ -1.6
SPT3YDR392W YDR541CQ03049 344 aa5.06□□□□□ -1.6
SPT3YDR392W DIC1Q06143 298 aa5.06□□□□□ -1.6
SPT3YDR392W YLR040CQ07988 224 aa5.06□□□□□ -1.6
SPT3YDR392W HEM12P32347 362 aaPredicted RBP5.05□□□□□ -1.6
SPT3YDR392W SGE1P33335 543 aa5.05□□□□□ -1.6
SPT3YDR392W AXL2P38928 823 aa5.05□□□□□ -1.6
SPT3YDR392W TIM17P39515 158 aa5.05□□□□□ -1.6
SPT3YDR392W AVT2P39981 480 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 92.8 ms