RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	SIP1	P32578	815 aa		5.1	□□□□□ -1.59
TRP4	YDR354W	VBA2	P38358	474 aa	Known RBP	5.1	□□□□□ -1.59
TRP4	YDR354W	ERC1	P38767	581 aa		5.1	□□□□□ -1.59
TRP4	YDR354W	MLP2	P40457	1679 aa		5.1	□□□□□ -1.59
TRP4	YDR354W	MET14	Q02196	202 aa		5.1	□□□□□ -1.59
TRP4	YDR354W	LYS21	Q12122	440 aa	Known RBP	5.1	□□□□□ -1.59
TRP4	YDR354W	UFD4	P33202	1483 aa		5.09	□□□□□ -1.59
TRP4	YDR354W	GAL1	P04385	528 aa		5.09	□□□□□ -1.59
TRP4	YDR354W	YKL133C	P36066	463 aa		5.09	□□□□□ -1.59
TRP4	YDR354W	RPF2	P36160	344 aa	Known RBP	5.09	□□□□□ -1.59
TRP4	YDR354W	ERV46	P39727	415 aa		5.09	□□□□□ -1.59
TRP4	YDR354W	JHD1	P40034	492 aa		5.09	□□□□□ -1.59
TRP4	YDR354W	MNT3	P40549	630 aa		5.09	□□□□□ -1.59
TRP4	YDR354W	COP1	P53622	1201 aa	Known RBP	5.09	□□□□□ -1.59
TRP4	YDR354W	YAT1	P80235	687 aa		5.09	□□□□□ -1.59
TRP4	YDR354W	HIM1	Q06674	414 aa		5.09	□□□□□ -1.59
TRP4	YDR354W	SIR1	P21691	654 aa		5.08	□□□□□ -1.6
TRP4	YDR354W	PDE1	P22434	369 aa		5.08	□□□□□ -1.6
TRP4	YDR354W	SWI4	P25302	1093 aa	Known RBP	5.08	□□□□□ -1.6
TRP4	YDR354W	COQ3	P27680	312 aa		5.08	□□□□□ -1.6
TRP4	YDR354W	FLO5	P38894	1075 aa		5.08	□□□□□ -1.6
TRP4	YDR354W	QRI7	P43122	407 aa		5.08	□□□□□ -1.6
TRP4	YDR354W	NPA3	P47122	385 aa		5.08	□□□□□ -1.6
TRP4	YDR354W	YRB30	P53107	440 aa	Predicted RBP	5.08	□□□□□ -1.6
TRP4	YDR354W	YPL191C	Q08930	360 aa		5.08	□□□□□ -1.6
TRP4	YDR354W	ILV2	P07342	687 aa	Known RBP	5.07	□□□□□ -1.6
TRP4	YDR354W	ILS1	P09436	1072 aa	Known RBP	5.07	□□□□□ -1.6
TRP4	YDR354W	POL3	P15436	1097 aa		5.07	□□□□□ -1.6
TRP4	YDR354W	GSH1	P32477	678 aa		5.07	□□□□□ -1.6
TRP4	YDR354W	APM3	P38153	483 aa		5.07	□□□□□ -1.6
TRP4	YDR354W	UBP7	P40453	1071 aa		5.07	□□□□□ -1.6
TRP4	YDR354W	CAB2	P40506	365 aa		5.07	□□□□□ -1.6
TRP4	YDR354W	HIS6	P40545	261 aa		5.07	□□□□□ -1.6
TRP4	YDR354W	NOP2	P40991	618 aa	Known RBP	5.07	□□□□□ -1.6
TRP4	YDR354W	BRE1	Q07457	700 aa	Known RBP	5.07	□□□□□ -1.6
TRP4	YDR354W	CIR2	Q08822	631 aa		5.07	□□□□□ -1.6
TRP4	YDR354W	HER1	Q12276	1246 aa		5.07	□□□□□ -1.6
TRP4	YDR354W	YBR255C-A	Q3E776	120 aa		5.07	□□□□□ -1.6
TRP4	YDR354W	RKR1	Q04781	1562 aa		5.07	□□□□□ -1.6
TRP4	YDR354W	TAF2	P23255	1407 aa		5.06	□□□□□ -1.6
TRP4	YDR354W	GAL4	P04386	881 aa		5.06	□□□□□ -1.6
TRP4	YDR354W	ADE3	P07245	946 aa	Known RBP	5.06	□□□□□ -1.6
TRP4	YDR354W	RIT1	P23796	513 aa		5.06	□□□□□ -1.6
TRP4	YDR354W	PCI8	P40512	444 aa		5.06	□□□□□ -1.6
TRP4	YDR354W	CFD1	P40558	293 aa		5.06	□□□□□ -1.6
TRP4	YDR354W	SCW4	P53334	386 aa	Known RBP	5.06	□□□□□ -1.6
TRP4	YDR354W	ARA2	Q04212	335 aa		5.06	□□□□□ -1.6
TRP4	YDR354W	MLC2	Q06580	163 aa		5.06	□□□□□ -1.6
TRP4	YDR354W	PFA4	Q12006	378 aa		5.06	□□□□□ -1.6
TRP4	YDR354W	COX1	P00401	534 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	YER190C-B	P0CX94	160 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	YEL077W-A	P0CX95	160 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	YGR296C-B	P0CX96	160 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	YPL283W-B	P0CX97	160 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	YPR204C-A	P0CX98	160 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	TAM41	P53230	385 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	YGR079W	P53249	370 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	YPL108W	Q02872	168 aa	Predicted RBP	5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-H	O13535	1793 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-DR5	P0C2I2	1755 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-DR6	P0C2I3	1755 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-LR2	P0C2I5	1755 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-PR2	P0C2J0	1756 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-JR1	P47098	1755 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-ML2	Q03434	1755 aa	Known RBP	5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-ER1	Q03612	1755 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-ML1	Q04711	1755 aa	Known RBP	5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-GR2	Q12269	1755 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-OL	Q12273	1755 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	TY1B-PL	Q12414	1755 aa	Known RBP	5.05	□□□□□ -1.6
TRP4	YDR354W	YPK9	Q12697	1472 aa		5.05	□□□□□ -1.6
TRP4	YDR354W	PEP1	P32319	1579 aa		5.04	□□□□□ -1.6
TRP4	YDR354W	NUP170	P38181	1502 aa		5.04	□□□□□ -1.6
TRP4	YDR354W	YPR089W	O13585	888 aa		5.04	□□□□□ -1.6
TRP4	YDR354W	PIF1	P07271	859 aa		5.04	□□□□□ -1.6
TRP4	YDR354W	MSS18	P08593	268 aa		5.04	□□□□□ -1.6
TRP4	YDR354W	MCM3	P24279	971 aa	Known RBP	5.04	□□□□□ -1.6
TRP4	YDR354W	PTC6	P25646	442 aa		5.04	□□□□□ -1.6
TRP4	YDR354W	YMR124W	P39523	943 aa	Known RBP	5.04	□□□□□ -1.6
TRP4	YDR354W	TAN1	P53072	289 aa	Predicted RBP	5.04	□□□□□ -1.6
TRP4	YDR354W	IWR1	Q07532	353 aa	Predicted RBP	5.04	□□□□□ -1.6
TRP4	YDR354W	PTP2	P29461	750 aa		5.03	□□□□□ -1.6
TRP4	YDR354W	SWC3	P31376	625 aa		5.03	□□□□□ -1.6
TRP4	YDR354W	ASK1	P35734	292 aa		5.03	□□□□□ -1.6
TRP4	YDR354W	SPC72	P39723	622 aa		5.03	□□□□□ -1.6
TRP4	YDR354W	YPL068C	Q02749	293 aa		5.03	□□□□□ -1.6
TRP4	YDR354W	ATG21	Q02887	496 aa		5.03	□□□□□ -1.6
TRP4	YDR354W	EIS1	Q05050	843 aa	Known RBP	5.03	□□□□□ -1.6
TRP4	YDR354W	LEA1	Q08963	238 aa	Predicted RBP	5.03	□□□□□ -1.6
TRP4	YDR354W	GET3	Q12154	354 aa	Known RBP	5.03	□□□□□ -1.6
TRP4	YDR354W	SUL2	Q12325	893 aa		5.03	□□□□□ -1.6
TRP4	YDR354W	ECM5	Q03214	1411 aa		5.03	□□□□□ -1.6
TRP4	YDR354W	TY1B-BR	Q12193	1756 aa		5.02	□□□□□ -1.61
TRP4	YDR354W	TY1B-GR3	Q12316	1755 aa		5.02	□□□□□ -1.61
TRP4	YDR354W	TY1B-OR	Q92393	1755 aa		5.02	□□□□□ -1.61
TRP4	YDR354W	TOP1	P04786	769 aa		5.02	□□□□□ -1.61
TRP4	YDR354W	URK1	P27515	501 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms