RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W PRP3Q03338 469 aaPredicted RBP6.33□□□□□ -1.4
TRP1YDR007W YLR040CQ07988 224 aa6.33□□□□□ -1.4
TRP1YDR007W PNO1Q99216 274 aaKnown RBP6.33□□□□□ -1.4
TRP1YDR007W LTV1P34078 463 aa6.32□□□□□ -1.4
TRP1YDR007W SDH8P38345 138 aa6.32□□□□□ -1.4
TRP1YDR007W SIP4P46954 829 aa6.32□□□□□ -1.4
TRP1YDR007W NMA2P53204 395 aa6.32□□□□□ -1.4
TRP1YDR007W RIA1P53893 1110 aa6.32□□□□□ -1.4
TRP1YDR007W REG1Q00816 1014 aa6.32□□□□□ -1.4
TRP1YDR007W MTG1Q03151 367 aaPredicted RBP6.32□□□□□ -1.4
TRP1YDR007W UFO1Q04511 668 aa6.32□□□□□ -1.4
TRP1YDR007W TAH18Q12181 623 aa6.32□□□□□ -1.4
TRP1YDR007W BPT1P14772 1559 aa6.31□□□□□ -1.4
TRP1YDR007W MET8P15807 274 aa6.31□□□□□ -1.4
TRP1YDR007W ESL2P36168 1195 aa6.31□□□□□ -1.4
TRP1YDR007W PPS1P38148 807 aa6.31□□□□□ -1.4
TRP1YDR007W TCD1P38756 429 aa6.31□□□□□ -1.4
TRP1YDR007W LNP1P38878 278 aa6.31□□□□□ -1.4
TRP1YDR007W DSN1P40568 576 aa6.31□□□□□ -1.4
TRP1YDR007W ASE1P50275 885 aa6.31□□□□□ -1.4
TRP1YDR007W ATG4P53867 494 aa6.31□□□□□ -1.4
TRP1YDR007W DAK1P54838 584 aaKnown RBP6.31□□□□□ -1.4
TRP1YDR007W SSL2Q00578 843 aa6.31□□□□□ -1.4
TRP1YDR007W USA1Q03714 838 aa6.31□□□□□ -1.4
TRP1YDR007W TDA9Q04545 1251 aa6.31□□□□□ -1.4
TRP1YDR007W RCO1Q04779 684 aa6.31□□□□□ -1.4
TRP1YDR007W TMA16Q08687 178 aa6.31□□□□□ -1.4
TRP1YDR007W YPL216WQ08964 1102 aa6.31□□□□□ -1.4
TRP1YDR007W RKI1Q12189 258 aa6.31□□□□□ -1.4
TRP1YDR007W NTO1Q12311 748 aa6.31□□□□□ -1.4
TRP1YDR007W ERG27Q12452 347 aaKnown RBP6.31□□□□□ -1.4
TRP1YDR007W TY2B-LR1P0C2J3 1770 aa6.31□□□□□ -1.4
TRP1YDR007W TY2B-FP0CX63 1770 aa6.31□□□□□ -1.4
TRP1YDR007W TY2B-GR2P0CX64 1770 aa6.31□□□□□ -1.4
TRP1YDR007W TY2B-CP25384 1770 aa6.31□□□□□ -1.4
TRP1YDR007W TY2B-DR2Q03494 1770 aa6.31□□□□□ -1.4
TRP1YDR007W TY1B-DR1Q03855 1755 aa6.31□□□□□ -1.4
TRP1YDR007W TY2B-DR3Q07791 1770 aaKnown RBP6.31□□□□□ -1.4
TRP1YDR007W TY2B-OR1Q12113 1770 aa6.31□□□□□ -1.4
TRP1YDR007W TY2B-DR1Q12472 1770 aa6.31□□□□□ -1.4
TRP1YDR007W TY2B-OR2Q12501 1770 aa6.31□□□□□ -1.4
TRP1YDR007W CDC24P11433 854 aaPredicted RBP6.3□□□□□ -1.4
TRP1YDR007W SPO16P17122 198 aa6.3□□□□□ -1.4
TRP1YDR007W URK1P27515 501 aa6.3□□□□□ -1.4
TRP1YDR007W MRP20P32387 263 aa6.3□□□□□ -1.4
TRP1YDR007W BYE1P36106 594 aa6.3□□□□□ -1.4
TRP1YDR007W CCL1P37366 393 aa6.3□□□□□ -1.4
TRP1YDR007W NOP4P37838 685 aaKnown RBP6.3□□□□□ -1.4
TRP1YDR007W KSP1P38691 1029 aaKnown RBP6.3□□□□□ -1.4
TRP1YDR007W YIL161WP40449 235 aaKnown RBP6.3□□□□□ -1.4
TRP1YDR007W ARC1P46672 376 aaKnown RBP6.3□□□□□ -1.4
TRP1YDR007W SNF12P53628 566 aa6.3□□□□□ -1.4
TRP1YDR007W YKU80Q04437 629 aa6.3□□□□□ -1.4
TRP1YDR007W NUS1Q12063 375 aa6.3□□□□□ -1.4
TRP1YDR007W HUA2Q12134 243 aa6.3□□□□□ -1.4
TRP1YDR007W RVB2Q12464 471 aaKnown RBP6.3□□□□□ -1.4
TRP1YDR007W YOR111WQ99210 232 aa6.3□□□□□ -1.4
TRP1YDR007W PCT1P13259 424 aa6.29□□□□□ -1.4
TRP1YDR007W ERG8P24521 451 aa6.29□□□□□ -1.4
TRP1YDR007W MSP1P28737 362 aa6.29□□□□□ -1.4
TRP1YDR007W RPS0AP32905 252 aaKnown RBP6.29□□□□□ -1.4
TRP1YDR007W PSD1P39006 500 aa6.29□□□□□ -1.4
TRP1YDR007W YIP4P53093 235 aa6.29□□□□□ -1.4
TRP1YDR007W BUD17P53727 317 aa6.29□□□□□ -1.4
TRP1YDR007W STP3Q05937 343 aa6.29□□□□□ -1.4
TRP1YDR007W VIP1Q06685 1146 aaKnown RBP6.29□□□□□ -1.4
TRP1YDR007W YOL073CQ08232 322 aa6.29□□□□□ -1.4
TRP1YDR007W TGS1Q12052 315 aa6.29□□□□□ -1.4
TRP1YDR007W YER175W-AQ8TGU4 54 aa6.29□□□□□ -1.4
TRP1YDR007W TUB2P02557 457 aaKnown RBP6.28□□□□□ -1.4
TRP1YDR007W RPP0P05317 312 aaKnown RBP6.28□□□□□ -1.4
TRP1YDR007W RPB2P08518 1224 aaKnown RBP6.28□□□□□ -1.4
TRP1YDR007W PRE8P23639 250 aa6.28□□□□□ -1.4
TRP1YDR007W CNE1P27825 502 aa6.28□□□□□ -1.4
TRP1YDR007W CDC5P32562 705 aa6.28□□□□□ -1.4
TRP1YDR007W NFU1P32860 256 aa6.28□□□□□ -1.4
TRP1YDR007W TDP1P38319 544 aa6.28□□□□□ -1.4
TRP1YDR007W VTC2P43585 828 aa6.28□□□□□ -1.4
TRP1YDR007W AVT1P47082 602 aa6.28□□□□□ -1.4
TRP1YDR007W SGM1P47166 707 aa6.28□□□□□ -1.4
TRP1YDR007W DUO1P53168 247 aaKnown RBP6.28□□□□□ -1.4
TRP1YDR007W MRPL19P53875 158 aa6.28□□□□□ -1.4
TRP1YDR007W CDC45Q08032 650 aa6.28□□□□□ -1.4
TRP1YDR007W SWT1Q12104 458 aa6.28□□□□□ -1.4
TRP1YDR007W TY1B-DR3Q99231 1755 aa6.28□□□□□ -1.4
TRP1YDR007W RPL19AP0CX82 189 aaKnown RBP6.27□□□□□ -1.41
TRP1YDR007W RPL19BP0CX83 189 aaPredicted RBP6.27□□□□□ -1.41
TRP1YDR007W SRP54P20424 541 aaKnown RBP6.27□□□□□ -1.41
TRP1YDR007W PDE1P22434 369 aa6.27□□□□□ -1.41
TRP1YDR007W PGS1P25578 521 aa6.27□□□□□ -1.41
TRP1YDR007W CTS1P29029 562 aa6.27□□□□□ -1.41
TRP1YDR007W SAC6P32599 642 aaKnown RBP6.27□□□□□ -1.41
TRP1YDR007W ELM1P32801 640 aa6.27□□□□□ -1.41
TRP1YDR007W LOT5P34234 306 aa6.27□□□□□ -1.41
TRP1YDR007W YBR225WP38321 900 aa6.27□□□□□ -1.41
TRP1YDR007W CBR1P38626 284 aaKnown RBP6.27□□□□□ -1.41
TRP1YDR007W ARG2P40360 574 aa6.27□□□□□ -1.41
TRP1YDR007W PFK26P40433 827 aaKnown RBP6.27□□□□□ -1.41
TRP1YDR007W CTR1P49573 406 aa6.27□□□□□ -1.41
TRP1YDR007W TIM10P87108 93 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms