RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C RPL19BP0CX83 189 aaPredicted RBP3.73□□□□□ -1.81
RRP42YDL111C CDC24P11433 854 aaPredicted RBP3.73□□□□□ -1.81
RRP42YDL111C THR1P17423 357 aaKnown RBP3.73□□□□□ -1.81
RRP42YDL111C UBS1P38290 277 aa3.73□□□□□ -1.81
RRP42YDL111C SDH8P38345 138 aa3.73□□□□□ -1.81
RRP42YDL111C NDC80P40460 691 aa3.73□□□□□ -1.81
RRP42YDL111C APM1Q00776 475 aaPredicted RBP3.73□□□□□ -1.81
RRP42YDL111C MTG1Q03151 367 aaPredicted RBP3.73□□□□□ -1.81
RRP42YDL111C FCP1Q03254 732 aa3.73□□□□□ -1.81
RRP42YDL111C ATG23Q06671 453 aa3.73□□□□□ -1.81
RRP42YDL111C YDL086WQ07505 273 aa3.73□□□□□ -1.81
RRP42YDL111C ERG27Q12452 347 aaKnown RBP3.73□□□□□ -1.81
RRP42YDL111C PCD1Q12524 340 aa3.73□□□□□ -1.81
RRP42YDL111C YBR255C-AQ3E776 120 aa3.73□□□□□ -1.81
RRP42YDL111C OLE1P21147 510 aaKnown RBP3.72□□□□□ -1.81
RRP42YDL111C PRE8P23639 250 aa3.72□□□□□ -1.81
RRP42YDL111C SGF29P25554 259 aa3.72□□□□□ -1.81
RRP42YDL111C PGS1P25578 521 aa3.72□□□□□ -1.81
RRP42YDL111C MRP20P32387 263 aa3.72□□□□□ -1.81
RRP42YDL111C EMP70P32802 667 aa3.72□□□□□ -1.81
RRP42YDL111C NPL6P32832 435 aa3.72□□□□□ -1.81
RRP42YDL111C ESL2P36168 1195 aa3.72□□□□□ -1.81
RRP42YDL111C APL3P38065 1025 aa3.72□□□□□ -1.81
RRP42YDL111C UTP9P38882 575 aaKnown RBP3.72□□□□□ -1.81
RRP42YDL111C YIL161WP40449 235 aaKnown RBP3.72□□□□□ -1.81
RRP42YDL111C UBP7P40453 1071 aa3.72□□□□□ -1.81
RRP42YDL111C THI6P41835 540 aa3.72□□□□□ -1.81
RRP42YDL111C MRPL19P53875 158 aa3.72□□□□□ -1.81
RRP42YDL111C MDG1P53885 366 aa3.72□□□□□ -1.81
RRP42YDL111C DAK1P54838 584 aaKnown RBP3.72□□□□□ -1.81
RRP42YDL111C UFO1Q04511 668 aa3.72□□□□□ -1.81
RRP42YDL111C GTB1Q04924 702 aa3.72□□□□□ -1.81
RRP42YDL111C CRF1Q04930 467 aa3.72□□□□□ -1.81
RRP42YDL111C YLR287CQ05881 355 aa3.72□□□□□ -1.81
RRP42YDL111C NUS1Q12063 375 aa3.72□□□□□ -1.81
RRP42YDL111C MLH3Q12083 715 aa3.72□□□□□ -1.81
RRP42YDL111C PDE1P22434 369 aa3.71□□□□□ -1.82
RRP42YDL111C URK1P27515 501 aa3.71□□□□□ -1.82
RRP42YDL111C LOT5P34234 306 aa3.71□□□□□ -1.82
RRP42YDL111C ELF1P36053 145 aa3.71□□□□□ -1.82
RRP42YDL111C CCL1P37366 393 aa3.71□□□□□ -1.82
RRP42YDL111C YBR225WP38321 900 aa3.71□□□□□ -1.82
RRP42YDL111C BUD16P39988 312 aa3.71□□□□□ -1.82
RRP42YDL111C LYS14P40971 790 aa3.71□□□□□ -1.82
RRP42YDL111C AAD10P47182 288 aa3.71□□□□□ -1.82
RRP42YDL111C TAM41P53230 385 aa3.71□□□□□ -1.82
RRP42YDL111C YGR151CP53287 111 aa3.71□□□□□ -1.82
RRP42YDL111C ATG4P53867 494 aa3.71□□□□□ -1.82
RRP42YDL111C TAF11Q04226 346 aa3.71□□□□□ -1.82
RRP42YDL111C YPL216WQ08964 1102 aa3.71□□□□□ -1.82
RRP42YDL111C BMS1Q08965 1183 aaKnown RBP3.71□□□□□ -1.82
RRP42YDL111C TGS1Q12052 315 aa3.71□□□□□ -1.82
RRP42YDL111C SWT1Q12104 458 aa3.71□□□□□ -1.82
RRP42YDL111C USV1Q12132 391 aa3.71□□□□□ -1.82
RRP42YDL111C HUA2Q12134 243 aa3.71□□□□□ -1.82
RRP42YDL111C ICT1Q12385 394 aa3.71□□□□□ -1.82
RRP42YDL111C YOR111WQ99210 232 aa3.71□□□□□ -1.82
RRP42YDL111C VCX1Q99385 411 aa3.71□□□□□ -1.82
RRP42YDL111C GCN4P03069 281 aa3.7□□□□□ -1.82
RRP42YDL111C SEC53P07283 254 aaKnown RBP3.7□□□□□ -1.82
RRP42YDL111C KGD2P19262 463 aaPredicted RBP3.7□□□□□ -1.82
RRP42YDL111C ERG8P24521 451 aa3.7□□□□□ -1.82
RRP42YDL111C LRE1P25579 583 aaKnown RBP3.7□□□□□ -1.82
RRP42YDL111C CDC5P32562 705 aa3.7□□□□□ -1.82
RRP42YDL111C GLG1P36143 616 aa3.7□□□□□ -1.82
RRP42YDL111C GEX2P36173 615 aa3.7□□□□□ -1.82
RRP42YDL111C RKM3P38222 552 aa3.7□□□□□ -1.82
RRP42YDL111C LNP1P38878 278 aa3.7□□□□□ -1.82
RRP42YDL111C FLC2P39719 783 aa3.7□□□□□ -1.82
RRP42YDL111C YEL020CP39994 560 aa3.7□□□□□ -1.82
RRP42YDL111C ARF3P40994 183 aaRIP-Chip data3.7□□□□□ -1.82not detected
RRP42YDL111C DUO1P53168 247 aaKnown RBP3.7□□□□□ -1.82
RRP42YDL111C SNF12P53628 566 aa3.7□□□□□ -1.82
RRP42YDL111C REG1Q00816 1014 aa3.7□□□□□ -1.82
RRP42YDL111C RPS15Q01855 142 aaKnown RBP3.7□□□□□ -1.82
RRP42YDL111C YSA1Q01976 231 aa3.7□□□□□ -1.82
RRP42YDL111C MFM1Q02783 413 aa3.7□□□□□ -1.82
RRP42YDL111C MUB1Q03162 620 aa3.7□□□□□ -1.82
RRP42YDL111C THI7Q05998 598 aa3.7□□□□□ -1.82
RRP42YDL111C VIP1Q06685 1146 aaKnown RBP3.7□□□□□ -1.82
RRP42YDL111C TMA16Q08687 178 aa3.7□□□□□ -1.82
RRP42YDL111C NMD4Q12129 218 aa3.7□□□□□ -1.82
RRP42YDL111C RKI1Q12189 258 aa3.7□□□□□ -1.82
RRP42YDL111C NOP58Q12499 511 aaKnown RBP3.7□□□□□ -1.82
RRP42YDL111C YBR126W-AQ8TGU7 68 aa3.7□□□□□ -1.82
RRP42YDL111C PNO1Q99216 274 aaKnown RBP3.7□□□□□ -1.82
RRP42YDL111C FUR1P18562 216 aaKnown RBP3.69□□□□□ -1.82
RRP42YDL111C SPO11P23179 398 aa3.69□□□□□ -1.82
RRP42YDL111C CNE1P27825 502 aa3.69□□□□□ -1.82
RRP42YDL111C TFC3P34111 1160 aa3.69□□□□□ -1.82
RRP42YDL111C YBL029WP38201 376 aa3.69□□□□□ -1.82
RRP42YDL111C YHR097CP38809 366 aaKnown RBP3.69□□□□□ -1.82
RRP42YDL111C FMP10P40098 244 aa3.69□□□□□ -1.82
RRP42YDL111C SLZ1P40167 298 aa3.69□□□□□ -1.82
RRP42YDL111C ARG2P40360 574 aa3.69□□□□□ -1.82
RRP42YDL111C RMD8P43620 662 aa3.69□□□□□ -1.82
RRP42YDL111C CTR1P49573 406 aa3.69□□□□□ -1.82
RRP42YDL111C DIP5P53388 608 aa3.69□□□□□ -1.82
RRP42YDL111C SPC98P53540 846 aa3.69□□□□□ -1.82
RRP42YDL111C ARE2P53629 642 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms