RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W YLR464WP0CX17 216 aa3.98□□□□□ -1.77
TSR1YDL060W RED1P14291 827 aa3.98□□□□□ -1.77
TSR1YDL060W POL3P15436 1097 aa3.98□□□□□ -1.77
TSR1YDL060W MBR1P23493 339 aa3.98□□□□□ -1.77
TSR1YDL060W YKL100CP34248 587 aa3.98□□□□□ -1.77
TSR1YDL060W APT2P36973 181 aa3.98□□□□□ -1.77
TSR1YDL060W YBR138CP38277 524 aa3.98□□□□□ -1.77
TSR1YDL060W YHL017WP38745 532 aa3.98□□□□□ -1.77
TSR1YDL060W NPR2P39923 615 aa3.98□□□□□ -1.77
TSR1YDL060W YEL076CP39971 216 aa3.98□□□□□ -1.77
TSR1YDL060W YMR155WQ03795 547 aa3.98□□□□□ -1.77
TSR1YDL060W VPS20Q04272 221 aa3.98□□□□□ -1.77
TSR1YDL060W YLR407WQ06070 228 aa3.98□□□□□ -1.77
TSR1YDL060W CSR1Q06705 408 aaKnown RBP3.98□□□□□ -1.77
TSR1YDL060W ISA1Q07821 250 aaPredicted RBP3.98□□□□□ -1.77
TSR1YDL060W ILS1P09436 1072 aaKnown RBP3.98□□□□□ -1.77
TSR1YDL060W LAT1P12695 482 aaKnown RBP3.98□□□□□ -1.77
TSR1YDL060W PDX1P16451 410 aa3.98□□□□□ -1.77
TSR1YDL060W DBF4P32325 704 aa3.98□□□□□ -1.77
TSR1YDL060W RIX1P38883 763 aaPredicted RBP3.98□□□□□ -1.77
TSR1YDL060W VPS41P38959 992 aa3.98□□□□□ -1.77
TSR1YDL060W BRE5P53741 515 aaKnown RBP3.98□□□□□ -1.77
TSR1YDL060W YPL191CQ08930 360 aa3.98□□□□□ -1.77
TSR1YDL060W TGL5Q12043 749 aa3.98□□□□□ -1.77
TSR1YDL060W ATG11Q12527 1178 aa3.98□□□□□ -1.77
TSR1YDL060W MET17P06106 444 aa3.97□□□□□ -1.77
TSR1YDL060W CKA1P15790 372 aa3.97□□□□□ -1.77
TSR1YDL060W SRP54P20424 541 aaKnown RBP3.97□□□□□ -1.77
TSR1YDL060W SGF29P25554 259 aa3.97□□□□□ -1.77
TSR1YDL060W ERG3P32353 365 aa3.97□□□□□ -1.77
TSR1YDL060W YKR075CP36155 307 aa3.97□□□□□ -1.77
TSR1YDL060W ESL2P36168 1195 aa3.97□□□□□ -1.77
TSR1YDL060W OLA1P38219 394 aaKnown RBP3.97□□□□□ -1.77
TSR1YDL060W UME6P39001 836 aa3.97□□□□□ -1.77
TSR1YDL060W BEM4P39011 633 aa3.97□□□□□ -1.77
TSR1YDL060W MAD2P40958 196 aa3.97□□□□□ -1.77
TSR1YDL060W YJL163CP46996 555 aa3.97□□□□□ -1.77
TSR1YDL060W MRS2Q01926 470 aa3.97□□□□□ -1.77
TSR1YDL060W LEE1Q02799 301 aaKnown RBP3.97□□□□□ -1.77
TSR1YDL060W YPL225WQ08971 146 aaKnown RBP3.97□□□□□ -1.77
TSR1YDL060W PDR11P40550 1411 aa3.97□□□□□ -1.77
TSR1YDL060W NUP192P47054 1683 aa3.97□□□□□ -1.77
TSR1YDL060W MET5P47169 1442 aa3.97□□□□□ -1.77
TSR1YDL060W BET2P20133 325 aa3.97□□□□□ -1.77
TSR1YDL060W OLE1P21147 510 aaKnown RBP3.97□□□□□ -1.77
TSR1YDL060W SWI4P25302 1093 aaKnown RBP3.97□□□□□ -1.77
TSR1YDL060W DGR2P32330 852 aa3.97□□□□□ -1.77
TSR1YDL060W MF(ALPHA)2P32435 120 aa3.97□□□□□ -1.77
TSR1YDL060W DPH5P32469 300 aaPredicted RBP3.97□□□□□ -1.77
TSR1YDL060W POP2P39008 433 aa3.97□□□□□ -1.77
TSR1YDL060W RIA1P53893 1110 aa3.97□□□□□ -1.77
TSR1YDL060W MUK1Q02866 612 aa3.97□□□□□ -1.77
TSR1YDL060W VTI1Q04338 217 aa3.97□□□□□ -1.77
TSR1YDL060W ORM2Q06144 216 aa3.97□□□□□ -1.77
TSR1YDL060W IWR1Q07532 353 aaPredicted RBP3.97□□□□□ -1.77
TSR1YDL060W TAD3Q9URQ3 322 aa3.97□□□□□ -1.77
TSR1YDL060W MIS1P09440 975 aaKnown RBP3.96□□□□□ -1.78
TSR1YDL060W MIC60P36112 540 aa3.96□□□□□ -1.78
TSR1YDL060W YBR053CP38235 358 aa3.96□□□□□ -1.78
TSR1YDL060W RTT107P38850 1070 aa3.96□□□□□ -1.78
TSR1YDL060W KHA1P40309 873 aa3.96□□□□□ -1.78
TSR1YDL060W GPD1Q00055 391 aaKnown RBP3.96□□□□□ -1.78
TSR1YDL060W TMN2Q04562 672 aa3.96□□□□□ -1.78
TSR1YDL060W ASM4Q05166 528 aa3.96□□□□□ -1.78
TSR1YDL060W DIN7Q12086 430 aa3.96□□□□□ -1.78
TSR1YDL060W HSP42Q12329 375 aa3.96□□□□□ -1.78
TSR1YDL060W DBP10Q12389 995 aaKnown RBP3.96□□□□□ -1.78
TSR1YDL060W RPS17AP02407 136 aaKnown RBP3.96□□□□□ -1.78
TSR1YDL060W ARG3P05150 338 aa3.96□□□□□ -1.78
TSR1YDL060W SES1P07284 462 aaKnown RBP3.96□□□□□ -1.78
TSR1YDL060W RPS17BP14127 136 aaKnown RBP3.96□□□□□ -1.78
TSR1YDL060W CDC43P18898 376 aa3.96□□□□□ -1.78
TSR1YDL060W SIR1P21691 654 aa3.96□□□□□ -1.78
TSR1YDL060W REV7P38927 245 aa3.96□□□□□ -1.78
TSR1YDL060W YIL166CP40445 542 aa3.96□□□□□ -1.78
TSR1YDL060W CTK1Q03957 528 aaKnown RBP3.96□□□□□ -1.78
TSR1YDL060W YPS7Q06325 596 aa3.96□□□□□ -1.78
TSR1YDL060W RPP0P05317 312 aaKnown RBP3.95□□□□□ -1.78
TSR1YDL060W PFK2P16862 959 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
TSR1YDL060W AKL1P38080 1108 aaKnown RBP3.95□□□□□ -1.78
TSR1YDL060W CBR1P38626 284 aaKnown RBP3.95□□□□□ -1.78
TSR1YDL060W PCL5P38794 229 aa3.95□□□□□ -1.78
TSR1YDL060W LTP1P40347 161 aa3.95□□□□□ -1.78
TSR1YDL060W MNT2P53059 558 aa3.95□□□□□ -1.78
TSR1YDL060W FCP1Q03254 732 aa3.95□□□□□ -1.78
TSR1YDL060W IRC13Q08630 104 aa3.95□□□□□ -1.78
TSR1YDL060W ACO1P19414 778 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
TSR1YDL060W TCD1P38756 429 aa3.95□□□□□ -1.78
TSR1YDL060W YNR071CP53757 342 aa3.95□□□□□ -1.78
TSR1YDL060W ZDS2P54786 942 aa3.95□□□□□ -1.78
TSR1YDL060W YDR131CQ03899 556 aa3.95□□□□□ -1.78
TSR1YDL060W ERV41Q04651 352 aa3.95□□□□□ -1.78
TSR1YDL060W SFH1Q06168 426 aa3.95□□□□□ -1.78
TSR1YDL060W THI22Q06490 572 aa3.95□□□□□ -1.78
TSR1YDL060W RRP9Q06506 573 aaKnown RBP3.95□□□□□ -1.78
TSR1YDL060W PLP2Q12017 286 aa3.95□□□□□ -1.78
TSR1YDL060W ADE3P07245 946 aaKnown RBP3.94□□□□□ -1.78
TSR1YDL060W IMG2P25642 146 aaPredicted RBP3.94□□□□□ -1.78
TSR1YDL060W TEF4P36008 412 aaKnown RBP3.94□□□□□ -1.78
TSR1YDL060W NPR3P38742 1146 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms