RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 R3HCC1Q9Y3T6 440 aaKnown RBP6.62□□□□□ -1.35
HMGB3P7-201ENST00000400214 UBR3Q6ZT12 1888 aa6.62□□□□□ -1.35
HMGB3P7-201ENST00000400214 MRC1P22897 1456 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 KDM6AO15550 1401 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 MYH14Q7Z406 1995 aaKnown RBP6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 ZPR1O75312 459 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 HSP90AB1P08238 724 aaKnown RBP6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 CTHP32929 405 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 COPS2P61201 443 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 INSM1Q01101 510 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 IFRD2Q12894 506 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 MAPRE1Q15691 268 aaKnown RBP6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 TXNRD1Q16881 649 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 C21orf62-AS1Q17RA5 79 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 INO80DQ53TQ3 878 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 SLC27A3Q5K4L6 730 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 MYO1HQ8N1T3 1032 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 C1orf131Q8NDD1 294 aaKnown RBP6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 SVIPQ8NHG7 77 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 TTC8Q8TAM2 541 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 ANAPC16Q96DE5 110 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 DCAF5Q96JK2 942 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 NEUROD6Q96NK8 337 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 ZHX3Q9H4I2 956 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 ADAMTS1Q9UHI8 967 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 LZTS1Q9Y250 596 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 CD2APQ9Y5K6 639 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 UBR2Q8IWV8 1755 aa6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 COL5A3P25940 1745 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P7-201ENST00000400214 MYBBP1AQ9BQG0 1328 aaKnown RBP6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 NPHP1O15259 732 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 CFHP08603 1231 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 HMOX1P09601 288 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 FAM163BP0C2L3 166 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 COL6A1P12109 1028 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 COPB2P35606 906 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 ST13P50502 369 aaKnown RBP6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 TMEM95Q3KNT9 176 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 AKAP4Q5JQC9 854 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 AXDND1Q5T1B0 1012 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 NBPF14Q5TI25 921 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 ZNF530Q6P9A1 599 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 PI16Q6UXB8 463 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 DZIP3Q86Y13 1208 aaKnown RBP6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 THNSL2Q86YJ6 484 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 CRIPAKQ8N1N5 446 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 PIGBQ92521 554 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 PTPRHQ9HD43 1115 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 LRRC4BQ9NT99 713 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 STRIP2Q9ULQ0 834 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 NUDCQ9Y266 331 aa6.6□□□□□ -1.35
HMGB3P7-201ENST00000400214 ALG1L2C9J202 215 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 SMAD7O15105 426 aaKnown RBP6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 RNF40O75150 1001 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 ASMTLO95671 621 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 LDHCP07864 332 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 HMGB2P26583 209 aaKnown RBP6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 SOX9P48436 509 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 RAB27AP51159 221 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 DNM1Q05193 864 aaKnown RBP6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 USP4Q13107 963 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 CNGB1Q14028 1251 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 TCEA2Q15560 299 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 MTHFSDQ2M296 383 aaKnown RBP6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 CCDC184Q52MB2 194 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 C2orf27AQ580R0 203 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 C1orf141Q5JVX7 400 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 ZNF697Q5TEC3 545 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 SLC4A10Q6U841 1118 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 MPRIPQ6WCQ1 1025 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 PODNQ7Z5L7 613 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 SMARCC1Q92922 1105 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 E2F7Q96AV8 911 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 SYTL4Q96C24 671 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 RUNDC1Q96C34 613 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 EAF1Q96JC9 268 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 ARHGAP9Q9BRR9 750 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 PRKRIP1Q9H875 184 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 ST7Q9NRC1 585 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 TAGLN3Q9UI15 199 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 TPX2Q9ULW0 747 aaKnown RBP6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 SLC27A5Q9Y2P5 690 aa6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 MRPS23Q9Y3D9 190 aaKnown RBP6.59□□□□□ -1.35
HMGB3P7-201ENST00000400214 C4BP0C0L5 1744 aa6.59□□□□□ -1.36
HMGB3P7-201ENST00000400214 PDPK1O15530 556 aa6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 ANP32CO43423 234 aa6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 RASGRP1O95267 797 aa6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 USP17L7P0C7H9 530 aa6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 PMLP29590 882 aa6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 POU5F1Q01860 360 aaKnown RBP6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 HLTFQ14527 1009 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 SLC15A2Q16348 729 aa6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 GRAMD1BQ3KR37 738 aa6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 ACBD5Q5T8D3 534 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 RNF19BQ6ZMZ0 732 aa6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 CHPFQ8IZ52 775 aa6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 IFNL3Q8IZI9 196 aa6.58□□□□□ -1.36
HMGB3P7-201ENST00000400214 TNS4Q8IZW8 715 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms