RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Brd3Q8K2F0 726 aaKnown RBP7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Luzp1Q8R4U7 1068 aaKnown RBP7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Rapgef4Q9EQZ6 1011 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Heg1E9Q7X6 1337 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Naaladl2A0A0N4SUJ3 795 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cep135Q6P5D4 1140 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Fchsd1Q6PFY1 688 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Trim56Q80VI1 734 aaKnown RBP7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Kiaa1524Q8BWY9 907 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Amigo3Q8C2S7 508 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Rec8Q8C5S7 591 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 ApobrQ8VBT6 942 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Krt23Q99PS0 422 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Calml3Q9D6P8 149 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Map3k20Q9ESL4 802 aaKnown RBP7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Zcchc17Q9ESX4 241 aaKnown RBP7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ranbp1P34022 203 aaKnown RBP7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Traf1P39428 409 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cplx1P63040 134 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Trappc10Q3TLI0 1259 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Fam117bQ3U3E2 584 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 E2f5Q61502 335 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cep131Q62036 1060 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Prkag3Q8BGM7 489 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Shisa4Q8CA71 197 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 NenfQ9CQ45 171 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ccdc97Q9DBT3 340 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ecm29Q6PDI5 1840 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Izumo3A6PWV3 263 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Zfp597E9Q6S0 419 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cyp26a1O55127 497 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 GmnnO88513 206 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Me1P06801 572 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Hoxa2P31245 372 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Pfkfb1P70266 471 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 DSCC1Q14AI0 399 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Pla2g4eQ50L42 875 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Trim37Q6PCX9 961 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 GlmnQ8BZM1 596 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Pm20d1Q8C165 503 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Spata32Q8C5V0 334 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tspyl4Q8VD63 406 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ncoa5Q91W39 579 aaKnown RBP7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Pla2g12bQ99P27 195 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Txnrd1Q9JMH6 613 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Myh7bA2AQP0 1941 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tpm3-rs7D3Z2H9 248 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Klhl33G3UW92 533 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Npy5rO70342 466 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Paxbp1P58501 919 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Arhgef16Q3U5C8 713 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ube2oQ6ZPJ3 1288 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Clec16aQ80U30 1036 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Enox1Q8BHR2 643 aaKnown RBP7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Arhgef6Q8K4I3 771 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ivns1abpQ920Q8 642 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Brms1Q99N20 246 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Trim34aQ99PP6 485 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cap2Q9CYT6 476 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 MrgbpQ9DAT2 204 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cxcl11Q9JHH5 100 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Mroh6V9GX81 722 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Aox3G3X982 1335 aa7.11□□□□□ -1.27
Lig4-202ENSMUST00000170033 Acad12D3Z7X0 555 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Akap2O54931 893 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Krt18P05784 423 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Hspa2P17156 633 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 NapbP28663 298 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 XpcP51612 930 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 CebpzP53569 1052 aaKnown RBP7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Kiaa1468Q148V7 1216 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Babam1Q3UI43 333 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Edrf1Q6GQV7 1239 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ppp2r5aQ6PD03 486 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Pcdhb15Q91Y04 786 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 CrebzfQ91ZR3 358 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Q9CYI0 393 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tbc1d7Q9D0K0 293 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ccdc39Q9D5Y1 937 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Pus3Q9JI38 481 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Clic4Q9QYB1 253 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Acot9Q9R0X4 439 aaKnown RBP7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Stk11Q9WTK7 436 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Zkscan5Q9Z1D8 819 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ccdc191J3QQ27 883 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 GabrdP22933 449 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tshz1Q5DTH5 1084 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Dcdc2Q5DU00 475 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Naif1Q6PFD7 327 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Zfp397Q7TNK4 527 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Olfr119Q7TRJ5 321 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tbc1d5Q80XQ2 815 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Alg3Q8K2A8 438 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Mta1Q8K4B0 715 aaKnown RBP7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tgs1Q923W1 853 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 NptxrQ99J85 493 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Nip7Q9CXK8 180 aaKnown RBP7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Rbm33Q9CXK9 1231 aaKnown RBP7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Kansl3A2RSY1 903 aaKnown RBP7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Bin2D3Z6Q9 489 aa7.1□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 93.2 ms