Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Gm25239-201ENSMUST00000174915 86 ntBASIC42.93■■■■■ 4.46
Trim37Q6PCX9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
Trim37Q6PCX9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Trim37Q6PCX9 Gm24109-201ENSMUST00000175489 103 ntBASIC37.65■■■■□ 3.62
Trim37Q6PCX9 Gm15042-201ENSMUST00000120212 883 ntBASIC36.73■■■■□ 3.47
Trim37Q6PCX9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
Trim37Q6PCX9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
Trim37Q6PCX9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.29■■■■□ 3.4
Trim37Q6PCX9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Trim37Q6PCX9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Trim37Q6PCX9 Gm15045-201ENSMUST00000117359 883 ntBASIC35.75■■■■□ 3.31
Trim37Q6PCX9 Gm23366-201ENSMUST00000175022 89 ntBASIC35.75■■■■□ 3.31
Trim37Q6PCX9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Trim37Q6PCX9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.38■■■■□ 3.25
Trim37Q6PCX9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.34■■■■□ 3.25
Trim37Q6PCX9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.1■■■■□ 3.21
Trim37Q6PCX9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Trim37Q6PCX9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Trim37Q6PCX9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.91■■■■□ 3.18
Trim37Q6PCX9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Trim37Q6PCX9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Trim37Q6PCX9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.25■■■■□ 3.07
Trim37Q6PCX9 Gm25238-201ENSMUST00000174914 89 ntBASIC34.14■■■■□ 3.06
Trim37Q6PCX9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Trim37Q6PCX9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.09■■■■□ 3.05
Trim37Q6PCX9 Psd-208ENSMUST00000224556 2034 ntBASIC34.08■■■■□ 3.05
Trim37Q6PCX9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Trim37Q6PCX9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.42■■■□□ 2.94
Trim37Q6PCX9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
Trim37Q6PCX9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.32■■■□□ 2.92
Trim37Q6PCX9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
Trim37Q6PCX9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Trim37Q6PCX9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Trim37Q6PCX9 Gm25262-201ENSMUST00000174934 133 ntBASIC33.14■■■□□ 2.9
Trim37Q6PCX9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.91■■■□□ 2.86
Trim37Q6PCX9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.86■■■□□ 2.85
Trim37Q6PCX9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Trim37Q6PCX9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
Trim37Q6PCX9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.83■■■□□ 2.85
Trim37Q6PCX9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.77■■■□□ 2.84
Trim37Q6PCX9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Trim37Q6PCX9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.67■■■□□ 2.82
Trim37Q6PCX9 Gm26115-201ENSMUST00000175605 87 ntBASIC32.65■■■□□ 2.82
Trim37Q6PCX9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.64■■■□□ 2.82
Trim37Q6PCX9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Trim37Q6PCX9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Trim37Q6PCX9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Trim37Q6PCX9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.48■■■□□ 2.79
Trim37Q6PCX9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Trim37Q6PCX9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
Trim37Q6PCX9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Trim37Q6PCX9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Trim37Q6PCX9 Gm8109-201ENSMUST00000194076 746 ntBASIC32.36■■■□□ 2.77
Trim37Q6PCX9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Trim37Q6PCX9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Trim37Q6PCX9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Trim37Q6PCX9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Trim37Q6PCX9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
Trim37Q6PCX9 Gm27325-201ENSMUST00000175467 74 ntBASIC32.03■■■□□ 2.72
Trim37Q6PCX9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.02■■■□□ 2.72
Trim37Q6PCX9 Rab21-202ENSMUST00000218831 843 ntBASIC31.99■■■□□ 2.71
Trim37Q6PCX9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Trim37Q6PCX9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Trim37Q6PCX9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.95■■■□□ 2.71
Trim37Q6PCX9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Trim37Q6PCX9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Trim37Q6PCX9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Trim37Q6PCX9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.75■■■□□ 2.67
Trim37Q6PCX9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Trim37Q6PCX9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.65■■■□□ 2.66
Trim37Q6PCX9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Trim37Q6PCX9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.55■■■□□ 2.64
Trim37Q6PCX9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.55■■■□□ 2.64
Trim37Q6PCX9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
Trim37Q6PCX9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Trim37Q6PCX9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Trim37Q6PCX9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Trim37Q6PCX9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Trim37Q6PCX9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Trim37Q6PCX9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Trim37Q6PCX9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.29■■■□□ 2.6
Trim37Q6PCX9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Trim37Q6PCX9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.25■■■□□ 2.59
Trim37Q6PCX9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Trim37Q6PCX9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Trim37Q6PCX9 Gm24804-201ENSMUST00000174982 85 ntBASIC31.19■■■□□ 2.58
Trim37Q6PCX9 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.18■■■□□ 2.58
Trim37Q6PCX9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Trim37Q6PCX9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Trim37Q6PCX9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Trim37Q6PCX9 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.04■■■□□ 2.56
Trim37Q6PCX9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.03■■■□□ 2.56
Trim37Q6PCX9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Trim37Q6PCX9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Trim37Q6PCX9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Trim37Q6PCX9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Trim37Q6PCX9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.8■■■□□ 2.52
Trim37Q6PCX9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.78■■■□□ 2.52
Trim37Q6PCX9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
Trim37Q6PCX9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.76■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms