Protein–RNA interactions for Protein: Q3U5C8

Arhgef16, Rho guanine nucleotide exchange factor 16, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef16Q3U5C8 Gm25239-201ENSMUST00000174915 86 ntBASIC40.73■■■■■ 4.11
Arhgef16Q3U5C8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
Arhgef16Q3U5C8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
Arhgef16Q3U5C8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.73■■■■□ 3.63
Arhgef16Q3U5C8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
Arhgef16Q3U5C8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Arhgef16Q3U5C8 Psd-208ENSMUST00000224556 2034 ntBASIC36.44■■■■□ 3.42
Arhgef16Q3U5C8 Gm15042-201ENSMUST00000120212 883 ntBASIC36.3■■■■□ 3.4
Arhgef16Q3U5C8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
Arhgef16Q3U5C8 Gm15045-201ENSMUST00000117359 883 ntBASIC35.71■■■■□ 3.31
Arhgef16Q3U5C8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.65■■■■□ 3.3
Arhgef16Q3U5C8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Arhgef16Q3U5C8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.35■■■■□ 3.25
Arhgef16Q3U5C8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Arhgef16Q3U5C8 Gm24109-201ENSMUST00000175489 103 ntBASIC35.02■■■■□ 3.2
Arhgef16Q3U5C8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
Arhgef16Q3U5C8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Arhgef16Q3U5C8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Arhgef16Q3U5C8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Arhgef16Q3U5C8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Arhgef16Q3U5C8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
Arhgef16Q3U5C8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.12
Arhgef16Q3U5C8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Arhgef16Q3U5C8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Arhgef16Q3U5C8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.38■■■■□ 3.09
Arhgef16Q3U5C8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.38■■■■□ 3.09
Arhgef16Q3U5C8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.08
Arhgef16Q3U5C8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Arhgef16Q3U5C8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
Arhgef16Q3U5C8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Arhgef16Q3U5C8 Gm23366-201ENSMUST00000175022 89 ntBASIC34.06■■■■□ 3.04
Arhgef16Q3U5C8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.04■■■■□ 3.04
Arhgef16Q3U5C8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Arhgef16Q3U5C8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.92■■■■□ 3.02
Arhgef16Q3U5C8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Arhgef16Q3U5C8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Arhgef16Q3U5C8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Arhgef16Q3U5C8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Arhgef16Q3U5C8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■□□ 2.99
Arhgef16Q3U5C8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Arhgef16Q3U5C8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.43■■■□□ 2.94
Arhgef16Q3U5C8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.39■■■□□ 2.94
Arhgef16Q3U5C8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.35■■■□□ 2.93
Arhgef16Q3U5C8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.34■■■□□ 2.93
Arhgef16Q3U5C8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.33■■■□□ 2.93
Arhgef16Q3U5C8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Arhgef16Q3U5C8 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.23■■■□□ 2.91
Arhgef16Q3U5C8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Arhgef16Q3U5C8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Arhgef16Q3U5C8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Arhgef16Q3U5C8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Arhgef16Q3U5C8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Arhgef16Q3U5C8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Arhgef16Q3U5C8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.55■■■□□ 2.8
Arhgef16Q3U5C8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Arhgef16Q3U5C8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.51■■■□□ 2.79
Arhgef16Q3U5C8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Arhgef16Q3U5C8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.47■■■□□ 2.79
Arhgef16Q3U5C8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Arhgef16Q3U5C8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.44■■■□□ 2.78
Arhgef16Q3U5C8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Arhgef16Q3U5C8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Arhgef16Q3U5C8 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.39■■■□□ 2.78
Arhgef16Q3U5C8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Arhgef16Q3U5C8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Arhgef16Q3U5C8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.26■■■□□ 2.76
Arhgef16Q3U5C8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
Arhgef16Q3U5C8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Arhgef16Q3U5C8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Arhgef16Q3U5C8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Arhgef16Q3U5C8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Arhgef16Q3U5C8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
Arhgef16Q3U5C8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
Arhgef16Q3U5C8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Arhgef16Q3U5C8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Arhgef16Q3U5C8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Arhgef16Q3U5C8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Arhgef16Q3U5C8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.01■■■□□ 2.72
Arhgef16Q3U5C8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.99■■■□□ 2.71
Arhgef16Q3U5C8 Gm27325-201ENSMUST00000175467 74 ntBASIC31.98■■■□□ 2.71
Arhgef16Q3U5C8 Gm25238-201ENSMUST00000174914 89 ntBASIC31.95■■■□□ 2.71
Arhgef16Q3U5C8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Arhgef16Q3U5C8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Arhgef16Q3U5C8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Arhgef16Q3U5C8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Arhgef16Q3U5C8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Arhgef16Q3U5C8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Arhgef16Q3U5C8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Arhgef16Q3U5C8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.61■■■□□ 2.65
Arhgef16Q3U5C8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Arhgef16Q3U5C8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Arhgef16Q3U5C8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Arhgef16Q3U5C8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Arhgef16Q3U5C8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Arhgef16Q3U5C8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Arhgef16Q3U5C8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Arhgef16Q3U5C8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Arhgef16Q3U5C8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Arhgef16Q3U5C8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Arhgef16Q3U5C8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms