RNA–Protein interactions for RNA: ENSMUST00000206029.1

Snhg1-208, mousemouse

TSL 3 BASIC

Gene Snhg1, Length 408 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snhg1-208ENSMUST00000206029 Piezo1E2JF22 2547 aa0.24□□□□□ -2.37
Snhg1-208ENSMUST00000206029 Prrc2cQ3TLH4 2846 aaKnown RBP0.23□□□□□ -2.37
Snhg1-208ENSMUST00000206029 Chd6A3KFM7 2711 aa0.23□□□□□ -2.37
Snhg1-208ENSMUST00000206029 Ankrd11E9Q4F7 2643 aa0.23□□□□□ -2.37
Snhg1-208ENSMUST00000206029 AcacaQ5SWU9 2345 aa0.23□□□□□ -2.37
Snhg1-208ENSMUST00000206029 Cep350E9Q309 3095 aa0.23□□□□□ -2.37
Snhg1-208ENSMUST00000206029 Jmjd1cQ69ZK6 2350 aa0.23□□□□□ -2.37
Snhg1-208ENSMUST00000206029 Lrp2A2ARV4 4660 aa0.22□□□□□ -2.37
Snhg1-208ENSMUST00000206029 TprF6ZDS4 2431 aaKnown RBP0.22□□□□□ -2.37
Snhg1-208ENSMUST00000206029 Stard9Q80TF6 4561 aa0.22□□□□□ -2.37
Snhg1-208ENSMUST00000206029 Nav2E9Q842 2432 aa0.22□□□□□ -2.37
Snhg1-208ENSMUST00000206029 Pcnx1Q9QYC1 2344 aa0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Col7a1Q63870 2944 aa0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Tenm4Q3UHK6 2771 aa0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Ptpn13Q64512 2453 aa0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 CubnQ9JLB4 3623 aa0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Tarbp1E9Q368 1579 aa0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Spta1P08032 2415 aa0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 PrkdcP97313 4128 aa0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Sprr2kO70562 68 aa0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Tnp1P10856 55 aa0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Chd8Q09XV5 2582 aaKnown RBP0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Lrrk2Q5S006 2527 aa0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 BptfA2A654 3036 aaKnown RBP0.21□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Wnk1P83741 2377 aa0.2□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Dync2h1Q45VK7 4306 aa0.2□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Igsf10Q3V1M1 2594 aa0.2□□□□□ -2.38
Snhg1-208ENSMUST00000206029 NebE9Q1W3 7152 aa0.2□□□□□ -2.38
Snhg1-208ENSMUST00000206029 SacsQ9JLC8 4582 aa0.2□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Defb40Q70KL2 73 aa0.2□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Dnah10D3YYQ8 4591 aa0.2□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Map1aQ9QYR6 2776 aa0.2□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Lama5Q61001 3718 aa0.2□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Fat4Q2PZL6 4981 aa0.19□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Dnah3Q8BW94 4083 aa0.19□□□□□ -2.38
Snhg1-208ENSMUST00000206029 DspE9Q557 2883 aaKnown RBP0.19□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Gm10999F6Q4M4 69 aa0.19□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Celsr1O35161 3034 aa0.19□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Syne1Q6ZWR6 8799 aa0.19□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Hmcn2A2AJ76 5100 aa0.19□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Dnah6E9Q0B6 4144 aa0.19□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Rif1Q6PR54 2419 aaKnown RBP0.18□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Lrp1bQ9JI18 4599 aa0.18□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Cacna1hO88427 2365 aa0.18□□□□□ -2.38
Snhg1-208ENSMUST00000206029 FlncQ8VHX6 2726 aaKnown RBP0.18□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Wfdc15aQ8BH89 80 aa0.18□□□□□ -2.38
Snhg1-208ENSMUST00000206029 OtogO55225 2910 aa0.18□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Duox1A2AQ92 1551 aa0.18□□□□□ -2.38
Snhg1-208ENSMUST00000206029 TgO08710 2766 aa0.17□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Sptbn4E9PX29 2561 aa0.17□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Itpr1P11881 2749 aa0.17□□□□□ -2.38
Snhg1-208ENSMUST00000206029 LystP97412 3788 aa0.17□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Trank1Q8BV79 2999 aa0.17□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Gm11639A0A1D5RLM8 5808 aa0.17□□□□□ -2.38
Snhg1-208ENSMUST00000206029 4930455H04RikD3Z622 58 aa0.17□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Sprr2bO70554 98 aa0.17□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Sprr2gO70558 76 aa0.17□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Defb14Q7TNV9 67 aa0.17□□□□□ -2.38
Snhg1-208ENSMUST00000206029 AcacbE9Q4Z2 2448 aa0.17□□□□□ -2.38
Snhg1-208ENSMUST00000206029 HttP42859 3119 aa0.16□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Dnah2P0C6F1 4456 aa0.16□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Tenm3Q9WTS6 2715 aa0.16□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Fat3Q8BNA6 4555 aa0.15□□□□□ -2.38
Snhg1-208ENSMUST00000206029 Sprr2hO70559 108 aa0.15□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Defb48Q3UW22 87 aa0.15□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Mycbp2Q7TPH6 4711 aa0.15□□□□□ -2.39
Snhg1-208ENSMUST00000206029 LrbaQ9ESE1 2856 aa0.15□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Col6a5A6H584 2640 aa0.15□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Ranbp2Q9ERU9 3053 aaKnown RBP0.15□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Epg5Q80TA9 2572 aa0.14□□□□□ -2.39
Snhg1-208ENSMUST00000206029 AhnakE9Q616 5656 aaKnown RBP0.14□□□□□ -2.39
Snhg1-208ENSMUST00000206029 4930595D18RikD3Z642 64 aa0.14□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Rpl39P62892 51 aa0.14□□□□□ -2.39
Snhg1-208ENSMUST00000206029 BC067074F6RXI4 2391 aa0.14□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Pkhd1l1Q80ZA4 4249 aa0.14□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Dnah7bL7N1Y0 4068 aa0.14□□□□□ -2.39
Snhg1-208ENSMUST00000206029 TchhA0A0B4J1F9 1599 aa0.14□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Gvin1Q80SU7 2427 aa0.14□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Nf1Q04690 2841 aa0.14□□□□□ -2.39
Snhg1-208ENSMUST00000206029 FryE9Q8I9 3020 aa0.13□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Stab1Q8R4Y4 2571 aa0.13□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Svep1A2AVA0 3567 aa0.13□□□□□ -2.39
Snhg1-208ENSMUST00000206029 FlnaQ8BTM8 2647 aaKnown RBP0.13□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Wfdc12Q9JHY3 85 aa0.13□□□□□ -2.39
Snhg1-208ENSMUST00000206029 TnxbO35452 4006 aa0.13□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Bdp1Q571C7 2467 aa0.13□□□□□ -2.39
Snhg1-208ENSMUST00000206029 CenpeQ6RT24 2474 aaKnown RBP0.13□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Col6a3E9PWQ3 3284 aa0.12□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Tln2Q71LX4 2375 aa0.12□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Dnah9B1AR51 4484 aa0.12□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Vps13bQ80TY5 3993 aa0.12□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Piezo2Q8CD54 2822 aa0.12□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Fsip2A2ARZ3 6995 aa0.12□□□□□ -2.39
Snhg1-208ENSMUST00000206029 1700018G05RikA0A1B0GSI2 66 aa0.12□□□□□ -2.39
Snhg1-208ENSMUST00000206029 SnrpgP62309 76 aaKnown RBP0.12□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Phgr1Q8K0G7 91 aa0.12□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Celsr2Q9R0M0 2920 aa0.11□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Hspg2Q05793 3707 aaKnown RBP0.11□□□□□ -2.39
Snhg1-208ENSMUST00000206029 Herc1E9PZP8 4859 aa0.11□□□□□ -2.39
Snhg1-208ENSMUST00000206029 AtmQ62388 3066 aa0.11□□□□□ -2.39
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms