RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Zzef1Q5SSH7 2924 aa7.73□□□□□ -1.17
Rnf40-202ENSMUST00000205694 2310061N02RikQ9D6S9 174 aa7.72□□□□□ -1.17
Rnf40-202ENSMUST00000205694 FcgbpE9Q0B5 2583 aa7.7□□□□□ -1.18
Rnf40-202ENSMUST00000205694 1700042G07RikB1AUF7 90 aa7.7□□□□□ -1.18
Rnf40-202ENSMUST00000205694 Tenm3Q9WTS6 2715 aa7.69□□□□□ -1.18
Rnf40-202ENSMUST00000205694 Tex15F8VPN2 2785 aa7.69□□□□□ -1.18
Rnf40-202ENSMUST00000205694 4933415A04RikQ9D443 101 aa7.68□□□□□ -1.18
Rnf40-202ENSMUST00000205694 Gm10382Q3V0T5 144 aa7.67□□□□□ -1.18
Rnf40-202ENSMUST00000205694 Dchs1E9PVD3 3291 aa7.66□□□□□ -1.18
Rnf40-202ENSMUST00000205694 Krtap14O08640 167 aa7.65□□□□□ -1.19
Rnf40-202ENSMUST00000205694 Celsr2Q9R0M0 2920 aa7.64□□□□□ -1.19
Rnf40-202ENSMUST00000205694 Akap9Q70FJ1 3797 aa7.63□□□□□ -1.19
Rnf40-202ENSMUST00000205694 Rps29P62274 56 aa7.62□□□□□ -1.19
Rnf40-202ENSMUST00000205694 Gm2310J3QNJ2 377 aa7.6□□□□□ -1.19
Rnf40-202ENSMUST00000205694 LrbaQ9ESE1 2856 aa7.56□□□□□ -1.2
Rnf40-202ENSMUST00000205694 SmcpP15265 143 aa7.55□□□□□ -1.2
Rnf40-202ENSMUST00000205694 Cox6b2Q80ZN9 88 aa7.54□□□□□ -1.2
Rnf40-202ENSMUST00000205694 Krtap10-4Q08EG8 221 aa7.53□□□□□ -1.2
Rnf40-202ENSMUST00000205694 Tnp2P11378 117 aa7.52□□□□□ -1.2
Rnf40-202ENSMUST00000205694 Zfhx3Q61329 3726 aa7.51□□□□□ -1.21
Rnf40-202ENSMUST00000205694 Lama5Q61001 3718 aa7.49□□□□□ -1.21
Rnf40-202ENSMUST00000205694 Gm884A2A9H6 3643 aa7.48□□□□□ -1.21
Rnf40-202ENSMUST00000205694 OtogO55225 2910 aa7.47□□□□□ -1.21
Rnf40-202ENSMUST00000205694 Ank2Q8C8R3 3898 aa7.44□□□□□ -1.22
Rnf40-202ENSMUST00000205694 Krtap10-10A0A1W2P7T6 217 aa7.44□□□□□ -1.22
Rnf40-202ENSMUST00000205694 Srrm2Q8BTI8 2703 aaKnown RBP7.43□□□□□ -1.22
Rnf40-202ENSMUST00000205694 Pdzd2E9Q1M1 2796 aa7.43□□□□□ -1.22
Rnf40-202ENSMUST00000205694 Nf1Q04690 2841 aa7.42□□□□□ -1.22
Rnf40-202ENSMUST00000205694 TgO08710 2766 aa7.41□□□□□ -1.22
Rnf40-202ENSMUST00000205694 Muc5acE9QAQ8 3455 aa7.38□□□□□ -1.23
Rnf40-202ENSMUST00000205694 Chd9Q8BYH8 2885 aa7.38□□□□□ -1.23
Rnf40-202ENSMUST00000205694 D6Ertd527eA0A0N4SWI3 464 aa7.37□□□□□ -1.23
Rnf40-202ENSMUST00000205694 Gm2696A0A1W2P709 240 aa7.29□□□□□ -1.24
Rnf40-202ENSMUST00000205694 Fbn1Q61554 2873 aaKnown RBP7.26□□□□□ -1.25
Rnf40-202ENSMUST00000205694 ApcQ61315 2845 aa7.26□□□□□ -1.25
Rnf40-202ENSMUST00000205694 Ndufaf8A2AMZ4 74 aa7.24□□□□□ -1.25
Rnf40-202ENSMUST00000205694 Gm21887J3QQ04 176 aa7.24□□□□□ -1.25
Rnf40-202ENSMUST00000205694 Smg1Q8BKX6 3658 aaKnown RBP7.23□□□□□ -1.25
Rnf40-202ENSMUST00000205694 SpenQ62504 3644 aaKnown RBP7.22□□□□□ -1.25
Rnf40-202ENSMUST00000205694 Gm5965D3Z724 196 aa7.16□□□□□ -1.26
Rnf40-202ENSMUST00000205694 Tnp1P10856 55 aa7.09□□□□□ -1.27
Rnf40-202ENSMUST00000205694 Helz2E9QAM5 2947 aaKnown RBP7.08□□□□□ -1.28
Rnf40-202ENSMUST00000205694 Gm40193A0A1B0GT39 78 aa7.06□□□□□ -1.28
Rnf40-202ENSMUST00000205694 2310057N15RikQ9D6T8 200 aa7.06□□□□□ -1.28
Rnf40-202ENSMUST00000205694 Csmd1Q923L3 3564 aa7.04□□□□□ -1.28
Rnf40-202ENSMUST00000205694 Gm9112A2AI92 75 aa7.03□□□□□ -1.28
Rnf40-202ENSMUST00000205694 Col7a1Q63870 2944 aa7.03□□□□□ -1.28
Rnf40-202ENSMUST00000205694 Tenm1Q9WTS4 2731 aa7.03□□□□□ -1.28
Rnf40-202ENSMUST00000205694 Svep1A2AVA0 3567 aa7□□□□□ -1.29
Rnf40-202ENSMUST00000205694 Gm9918Q8BUR5 174 aa6.98□□□□□ -1.29
Rnf40-202ENSMUST00000205694 Cmya5Q70KF4 3739 aa6.91□□□□□ -1.3
Rnf40-202ENSMUST00000205694 LystP97412 3788 aa6.91□□□□□ -1.3
Rnf40-202ENSMUST00000205694 Gm20537G3UYK7 97 aa6.91□□□□□ -1.3
Rnf40-202ENSMUST00000205694 Tenm2Q9WTS5 2764 aa6.89□□□□□ -1.31
Rnf40-202ENSMUST00000205694 A930033H14RikG5E8X6 103 aa6.89□□□□□ -1.31
Rnf40-202ENSMUST00000205694 Megf8P60882 2789 aa6.87□□□□□ -1.31
Rnf40-202ENSMUST00000205694 B930094E09RikQ8C4T2 136 aa6.86□□□□□ -1.31
Rnf40-202ENSMUST00000205694 Gm17416Q30KP4 66 aa6.8□□□□□ -1.32
Rnf40-202ENSMUST00000205694 2310079G19RikQ9D6L6 185 aa6.77□□□□□ -1.33
Rnf40-202ENSMUST00000205694 Dnah14A0A140LIJ4 4489 aa6.75□□□□□ -1.33
Rnf40-202ENSMUST00000205694 BsnO88737 3942 aa6.71□□□□□ -1.34
Rnf40-202ENSMUST00000205694 VwfQ8CIZ8 2813 aa6.71□□□□□ -1.34
Rnf40-202ENSMUST00000205694 Huwe1Q7TMY8 4377 aaKnown RBP6.7□□□□□ -1.34
Rnf40-202ENSMUST00000205694 2210017I01RikA0A0A6YVV1 95 aa6.66□□□□□ -1.34
Rnf40-202ENSMUST00000205694 TnxbO35452 4006 aa6.64□□□□□ -1.35
Rnf40-202ENSMUST00000205694 Csmd2V9GX34 3611 aa6.63□□□□□ -1.35
Rnf40-202ENSMUST00000205694 Muc6Q80T03 2850 aa6.62□□□□□ -1.35
Rnf40-202ENSMUST00000205694 Krtap19-5O08632 62 aa6.62□□□□□ -1.35
Rnf40-202ENSMUST00000205694 Gm17402F6Z0L5 76 aa6.6□□□□□ -1.35
Rnf40-202ENSMUST00000205694 Gm9736A0A1W2P7N1 277 aa6.58□□□□□ -1.36
Rnf40-202ENSMUST00000205694 Muc4Q8JZM8 3443 aa6.56□□□□□ -1.36
Rnf40-202ENSMUST00000205694 Dnah17Q69Z23 4481 aa6.54□□□□□ -1.36
Rnf40-202ENSMUST00000205694 Prm2P07978 107 aa6.52□□□□□ -1.37
Rnf40-202ENSMUST00000205694 Xirp2Q4U4S6 3784 aa6.45□□□□□ -1.38
Rnf40-202ENSMUST00000205694 CubnQ9JLB4 3623 aa6.43□□□□□ -1.38
Rnf40-202ENSMUST00000205694 Vps13dB1ART2 4390 aa6.36□□□□□ -1.39
Rnf40-202ENSMUST00000205694 Gm11939A2A592 99 aa6.36□□□□□ -1.39
Rnf40-202ENSMUST00000205694 Dync2h1Q45VK7 4306 aa6.35□□□□□ -1.39
Rnf40-202ENSMUST00000205694 PlecQ9QXS1 4691 aaKnown RBP6.33□□□□□ -1.4
Rnf40-202ENSMUST00000205694 Dnah6E9Q0B6 4144 aa6.32□□□□□ -1.4
Rnf40-202ENSMUST00000205694 Gm19668J3QMD1 248 aa6.32□□□□□ -1.4
Rnf40-202ENSMUST00000205694 PrkdcP97313 4128 aa6.27□□□□□ -1.41
Rnf40-202ENSMUST00000205694 Krtap13-1Q8K198 168 aa6.26□□□□□ -1.41
Rnf40-202ENSMUST00000205694 Dnah3Q8BW94 4083 aa6.26□□□□□ -1.41
Rnf40-202ENSMUST00000205694 4933428G20RikQ9D3X4 101 aa6.25□□□□□ -1.41
Rnf40-202ENSMUST00000205694 Dnah5Q8VHE6 4621 aa6.23□□□□□ -1.41
Rnf40-202ENSMUST00000205694 Dnah10D3YYQ8 4591 aa6.22□□□□□ -1.41
Rnf40-202ENSMUST00000205694 Gm10318A0A1W2P728 225 aa6.22□□□□□ -1.41
Rnf40-202ENSMUST00000205694 Kmt2aP55200 3966 aa6.21□□□□□ -1.42
Rnf40-202ENSMUST00000205694 Stard9Q80TF6 4561 aa6.2□□□□□ -1.42
Rnf40-202ENSMUST00000205694 Pkd1O08852 4293 aa6.19□□□□□ -1.42
Rnf40-202ENSMUST00000205694 Dync1h1Q9JHU4 4644 aaKnown RBP6.16□□□□□ -1.42
Rnf40-202ENSMUST00000205694 Dnah1E9Q8T7 4250 aa6.15□□□□□ -1.42
Rnf40-202ENSMUST00000205694 Dnah11E9Q7N9 4488 aa6.15□□□□□ -1.43
Rnf40-202ENSMUST00000205694 Dnah9B1AR51 4484 aa6.13□□□□□ -1.43
Rnf40-202ENSMUST00000205694 Crct1Q6PAI5 102 aa6.13□□□□□ -1.43
Rnf40-202ENSMUST00000205694 Krtap3-2Q9D638 99 aa6.1□□□□□ -1.43
Rnf40-202ENSMUST00000205694 Krtap3-3Q9D7P0 99 aa6.1□□□□□ -1.43
Rnf40-202ENSMUST00000205694 Krtap3-1A2A591 98 aa6.1□□□□□ -1.43
Rnf40-202ENSMUST00000205694 Dnah2P0C6F1 4456 aa6.04□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms