RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Gm10139O88245 57 aa8.13□□□□□ -1.11
Pdgfra-205ENSMUST00000201711 Cypt15B1AXS0 87 aa8.12□□□□□ -1.11
Pdgfra-205ENSMUST00000201711 Gm37013Q8K491 104 aa8.11□□□□□ -1.11
Pdgfra-205ENSMUST00000201711 NbdyA0A0N4SUI7 68 aa8.11□□□□□ -1.11
Pdgfra-205ENSMUST00000201711 Gm10643Q3URG9 111 aa8.1□□□□□ -1.11
Pdgfra-205ENSMUST00000201711 Limd2Q8BGB5 128 aa8.1□□□□□ -1.11
Pdgfra-205ENSMUST00000201711 Odf3bQ5M8M2 238 aa8.09□□□□□ -1.11
Pdgfra-205ENSMUST00000201711 Q8BGJ3 129 aa8.08□□□□□ -1.12
Pdgfra-205ENSMUST00000201711 2310050C09RikG5E8Z3 280 aa8.08□□□□□ -1.12
Pdgfra-205ENSMUST00000201711 Krtap10-10A0A1W2P7T6 217 aa8.08□□□□□ -1.12
Pdgfra-205ENSMUST00000201711 Krtap13O88375 197 aa8.08□□□□□ -1.12
Pdgfra-205ENSMUST00000201711 BsnO88737 3942 aa8.03□□□□□ -1.12
Pdgfra-205ENSMUST00000201711 Cypt14J3QPF7 87 aa8.02□□□□□ -1.13
Pdgfra-205ENSMUST00000201711 4933415A04RikQ9D443 101 aa8□□□□□ -1.13
Pdgfra-205ENSMUST00000201711 Hspg2Q05793 3707 aaKnown RBP7.96□□□□□ -1.13
Pdgfra-205ENSMUST00000201711 Uqcr11Q9CPX8 56 aa7.95□□□□□ -1.14
Pdgfra-205ENSMUST00000201711 Krtap29-1A2A5X4 342 aa7.93□□□□□ -1.14
Pdgfra-205ENSMUST00000201711 Gm2696A0A1W2P709 240 aa7.91□□□□□ -1.14
Pdgfra-205ENSMUST00000201711 Krtap14O08640 167 aa7.91□□□□□ -1.14
Pdgfra-205ENSMUST00000201711 Megf8P60882 2789 aa7.9□□□□□ -1.14
Pdgfra-205ENSMUST00000201711 Gm16253D3Z167 63 aa7.87□□□□□ -1.15
Pdgfra-205ENSMUST00000201711 Gm21798J3QNU5 87 aa7.86□□□□□ -1.15
Pdgfra-205ENSMUST00000201711 2310034C09RikQ9D746 214 aa7.84□□□□□ -1.15
Pdgfra-205ENSMUST00000201711 Gm3646F6S692 53 aa7.84□□□□□ -1.15
Pdgfra-205ENSMUST00000201711 Gm2310J3QNJ2 377 aa7.84□□□□□ -1.15
Pdgfra-205ENSMUST00000201711 4930507D05RikQ8C9C9 103 aa7.84□□□□□ -1.15
Pdgfra-205ENSMUST00000201711 Gm26620Q9CY65 116 aa7.84□□□□□ -1.15
Pdgfra-205ENSMUST00000201711 1700042G07RikB1AUF7 90 aa7.8□□□□□ -1.16
Pdgfra-205ENSMUST00000201711 Csmd3Q80T79 3707 aa7.72□□□□□ -1.17
Pdgfra-205ENSMUST00000201711 Gm17606F6ZL36 78 aa7.69□□□□□ -1.18
Pdgfra-205ENSMUST00000201711 Tnp2P11378 117 aa7.69□□□□□ -1.18
Pdgfra-205ENSMUST00000201711 Dnah14A0A140LIJ4 4489 aa7.68□□□□□ -1.18
Pdgfra-205ENSMUST00000201711 Dnah10D3YYQ8 4591 aa7.65□□□□□ -1.18
Pdgfra-205ENSMUST00000201711 Gm4491E0CX42 125 aa7.64□□□□□ -1.19
Pdgfra-205ENSMUST00000201711 Krtap15-1Q9QZU5 150 aa7.57□□□□□ -1.2
Pdgfra-205ENSMUST00000201711 Gm9821Q8K076 103 aa7.56□□□□□ -1.2
Pdgfra-205ENSMUST00000201711 Rnase13Q5GAM7 153 aa7.55□□□□□ -1.2
Pdgfra-205ENSMUST00000201711 Gm9918Q8BUR5 174 aa7.51□□□□□ -1.21
Pdgfra-205ENSMUST00000201711 Gm12216A0A1W2P827 62 aa7.42□□□□□ -1.22
Pdgfra-205ENSMUST00000201711 Gm3880A0A1B0GSB3 72 aa7.42□□□□□ -1.22
Pdgfra-205ENSMUST00000201711 Dnah7bL7N1Y0 4068 aa7.4□□□□□ -1.22
Pdgfra-205ENSMUST00000201711 Gm5767A0A0J9YTU8 78 aa7.37□□□□□ -1.23
Pdgfra-205ENSMUST00000201711 Huwe1Q7TMY8 4377 aaKnown RBP7.29□□□□□ -1.24
Pdgfra-205ENSMUST00000201711 Gm5965D3Z724 196 aa7.28□□□□□ -1.24
Pdgfra-205ENSMUST00000201711 Pla2g10Q9QXX3 151 aa7.27□□□□□ -1.25
Pdgfra-205ENSMUST00000201711 CriptO70333 101 aa7.26□□□□□ -1.25
Pdgfra-205ENSMUST00000201711 D6Ertd527eA0A0N4SWI3 464 aa7.23□□□□□ -1.25
Pdgfra-205ENSMUST00000201711 Gm9955Q8CEJ8 102 aa7.22□□□□□ -1.25
Pdgfra-205ENSMUST00000201711 Gm9736A0A1W2P7N1 277 aa7.2□□□□□ -1.26
Pdgfra-205ENSMUST00000201711 Mp68P56379 58 aa7.19□□□□□ -1.26
Pdgfra-205ENSMUST00000201711 Rps29P62274 56 aa7.15□□□□□ -1.26
Pdgfra-205ENSMUST00000201711 2310079G19RikQ9D6L6 185 aa7.14□□□□□ -1.27
Pdgfra-205ENSMUST00000201711 PlecQ9QXS1 4691 aaKnown RBP7.13□□□□□ -1.27
Pdgfra-205ENSMUST00000201711 Cox6b2Q80ZN9 88 aa7.13□□□□□ -1.27
Pdgfra-205ENSMUST00000201711 Gm10382Q3V0T5 144 aa7.12□□□□□ -1.27
Pdgfra-205ENSMUST00000201711 Dnah11E9Q7N9 4488 aa7.12□□□□□ -1.27
Pdgfra-205ENSMUST00000201711 Dnah17Q69Z23 4481 aa7.11□□□□□ -1.27
Pdgfra-205ENSMUST00000201711 Spink7Q6IE32 76 aa7.08□□□□□ -1.28
Pdgfra-205ENSMUST00000201711 Dnah5Q8VHE6 4621 aa7.07□□□□□ -1.28
Pdgfra-205ENSMUST00000201711 A930033H14RikG5E8X6 103 aa7.06□□□□□ -1.28
Pdgfra-205ENSMUST00000201711 Dnah9B1AR51 4484 aa7.06□□□□□ -1.28
Pdgfra-205ENSMUST00000201711 Sec61bQ9CQS8 96 aaKnown RBP7.06□□□□□ -1.28
Pdgfra-205ENSMUST00000201711 Kmt2aP55200 3966 aa7.05□□□□□ -1.28
Pdgfra-205ENSMUST00000201711 PrkdcP97313 4128 aa7.03□□□□□ -1.28
Pdgfra-205ENSMUST00000201711 Rpl37Q9D823 97 aa7.02□□□□□ -1.28
Pdgfra-205ENSMUST00000201711 2310057N15RikQ9D6T8 200 aa7.02□□□□□ -1.29
Pdgfra-205ENSMUST00000201711 Gm20538F6Z9R1 75 aa7.02□□□□□ -1.29
Pdgfra-205ENSMUST00000201711 Romo1P60603 79 aa7.01□□□□□ -1.29
Pdgfra-205ENSMUST00000201711 Gm20537G3UYK7 97 aa6.99□□□□□ -1.29
Pdgfra-205ENSMUST00000201711 Fam229aB2KGE5 128 aa6.99□□□□□ -1.29
Pdgfra-205ENSMUST00000201711 Dnah6E9Q0B6 4144 aa6.99□□□□□ -1.29
Pdgfra-205ENSMUST00000201711 Gm11939A2A592 99 aa6.94□□□□□ -1.3
Pdgfra-205ENSMUST00000201711 TnxbO35452 4006 aa6.93□□□□□ -1.3
Pdgfra-205ENSMUST00000201711 BC029722A0A0N4SW31 51 aa6.9□□□□□ -1.31
Pdgfra-205ENSMUST00000201711 Krtap19-5O08632 62 aa6.9□□□□□ -1.31
Pdgfra-205ENSMUST00000201711 Fras1Q80T14 4010 aa6.89□□□□□ -1.31
Pdgfra-205ENSMUST00000201711 Vps13dB1ART2 4390 aa6.88□□□□□ -1.31
Pdgfra-205ENSMUST00000201711 Dnah3Q8BW94 4083 aa6.88□□□□□ -1.31
Pdgfra-205ENSMUST00000201711 Krtap3-2Q9D638 99 aa6.85□□□□□ -1.31
Pdgfra-205ENSMUST00000201711 Krtap3-3Q9D7P0 99 aa6.85□□□□□ -1.31
Pdgfra-205ENSMUST00000201711 Lrp1bQ9JI18 4599 aa6.84□□□□□ -1.31
Pdgfra-205ENSMUST00000201711 Ryr1E9PZQ0 5035 aa6.83□□□□□ -1.32
Pdgfra-205ENSMUST00000201711 Stard9Q80TF6 4561 aa6.82□□□□□ -1.32
Pdgfra-205ENSMUST00000201711 Ryr3A2AGL3 4863 aa6.82□□□□□ -1.32
Pdgfra-205ENSMUST00000201711 Gm19426M0QWC7 77 aa6.79□□□□□ -1.32
Pdgfra-205ENSMUST00000201711 Dnah1E9Q8T7 4250 aa6.77□□□□□ -1.32
Pdgfra-205ENSMUST00000201711 Gm10318A0A1W2P728 225 aa6.74□□□□□ -1.33
Pdgfra-205ENSMUST00000201711 Dync2h1Q45VK7 4306 aa6.71□□□□□ -1.33
Pdgfra-205ENSMUST00000201711 ApobE9Q414 4505 aa6.71□□□□□ -1.33
Pdgfra-205ENSMUST00000201711 Dnah7cA0A087WR13 4024 aa6.71□□□□□ -1.33
Pdgfra-205ENSMUST00000201711 Lrp1Q91ZX7 4545 aaKnown RBP6.68□□□□□ -1.34
Pdgfra-205ENSMUST00000201711 Hectd4E9Q2E4 4418 aa6.64□□□□□ -1.35
Pdgfra-205ENSMUST00000201711 Dnah2P0C6F1 4456 aa6.64□□□□□ -1.35
Pdgfra-205ENSMUST00000201711 Camk2n1Q6QWF9 78 aa6.63□□□□□ -1.35
Pdgfra-205ENSMUST00000201711 Mycbp2Q7TPH6 4711 aa6.63□□□□□ -1.35
Pdgfra-205ENSMUST00000201711 Dnah7aE9Q0T8 4024 aa6.62□□□□□ -1.35
Pdgfra-205ENSMUST00000201711 Dync1h1Q9JHU4 4644 aaKnown RBP6.61□□□□□ -1.35
Pdgfra-205ENSMUST00000201711 Crct1Q6PAI5 102 aa6.6□□□□□ -1.35
Pdgfra-205ENSMUST00000201711 Fat3Q8BNA6 4555 aa6.6□□□□□ -1.35
Pdgfra-205ENSMUST00000201711 Gm17416Q30KP4 66 aa6.59□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms