RNA–Protein interactions for RNA: ENSMUST00000169900.7

Scn9a-207, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 7,497 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-207ENSMUST00000169900 Gm4491E0CX42 125 aa3.15□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Itpr2Q9Z329 2701 aa3.14□□□□□ -1.91
Scn9a-207ENSMUST00000169900 Gm9112A2AI92 75 aa3.14□□□□□ -1.91
Scn9a-207ENSMUST00000169900 Cmya5Q70KF4 3739 aa3.13□□□□□ -1.91
Scn9a-207ENSMUST00000169900 Gm19426M0QWC7 77 aa3.13□□□□□ -1.91
Scn9a-207ENSMUST00000169900 Odf3bQ5M8M2 238 aa3.13□□□□□ -1.91
Scn9a-207ENSMUST00000169900 6030445D17RikE9Q8F9 148 aa3.12□□□□□ -1.91
Scn9a-207ENSMUST00000169900 Svep1A2AVA0 3567 aa3.11□□□□□ -1.91
Scn9a-207ENSMUST00000169900 Fbn1Q61554 2873 aaKnown RBP3.11□□□□□ -1.91
Scn9a-207ENSMUST00000169900 Smim29Q8R043 75 aa3.1□□□□□ -1.91
Scn9a-207ENSMUST00000169900 Gm5767A0A0J9YTU8 78 aa3.09□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Ank2Q8C8R3 3898 aa3.09□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Gm9508A0A1W2P7W0 230 aa3.09□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Muc4Q8JZM8 3443 aa3.08□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Gm3646F6S692 53 aa3.08□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Srrm2Q8BTI8 2703 aaKnown RBP3.08□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Sprr1aQ62266 144 aa3.08□□□□□ -1.92
Scn9a-207ENSMUST00000169900 A0A1Y7VLE6 161 aa3.07□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Gm10139O88245 57 aa3.07□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Csmd1Q923L3 3564 aa3.07□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Krtap29-1A2A5X4 342 aa3.06□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Krtap13O88375 197 aa3.06□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Gm9507D3Z5T3 223 aa3.05□□□□□ -1.92
Scn9a-207ENSMUST00000169900 2310050C09RikG5E8Z3 280 aa3.05□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Muc6Q80T03 2850 aa3.04□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Pkd1l1Q8R526 2615 aa3.04□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Stab2Q8R4U0 2559 aa3.03□□□□□ -1.92
Scn9a-207ENSMUST00000169900 A0A1Y7VJH8 109 aa3.03□□□□□ -1.92
Scn9a-207ENSMUST00000169900 Gm16253D3Z167 63 aa3.02□□□□□ -1.93
Scn9a-207ENSMUST00000169900 Cystm1Q8K353 104 aa3.02□□□□□ -1.93
Scn9a-207ENSMUST00000169900 ApcQ61315 2845 aa3.02□□□□□ -1.93
Scn9a-207ENSMUST00000169900 Tenm2Q9WTS5 2764 aa3.01□□□□□ -1.93
Scn9a-207ENSMUST00000169900 Tnp2P11378 117 aa3.01□□□□□ -1.93
Scn9a-207ENSMUST00000169900 BC029722A0A0N4SW31 51 aa3□□□□□ -1.93
Scn9a-207ENSMUST00000169900 Krtap10-4Q08EG8 221 aa2.98□□□□□ -1.93
Scn9a-207ENSMUST00000169900 Megf8P60882 2789 aa2.98□□□□□ -1.93
Scn9a-207ENSMUST00000169900 Rpl37Q9D823 97 aa2.98□□□□□ -1.93
Scn9a-207ENSMUST00000169900 Ndufaf8A2AMZ4 74 aa2.97□□□□□ -1.93
Scn9a-207ENSMUST00000169900 Gm37013Q8K491 104 aa2.96□□□□□ -1.94
Scn9a-207ENSMUST00000169900 Dnah10D3YYQ8 4591 aa2.96□□□□□ -1.94
Scn9a-207ENSMUST00000169900 Rps29P62274 56 aa2.96□□□□□ -1.94
Scn9a-207ENSMUST00000169900 Krtap10-10A0A1W2P7T6 217 aa2.95□□□□□ -1.94
Scn9a-207ENSMUST00000169900 2310061N02RikQ9D6S9 174 aa2.95□□□□□ -1.94
Scn9a-207ENSMUST00000169900 1700042G07RikB1AUF7 90 aa2.94□□□□□ -1.94
Scn9a-207ENSMUST00000169900 Krtap14O08640 167 aa2.94□□□□□ -1.94
Scn9a-207ENSMUST00000169900 FcgbpE9Q0B5 2583 aa2.94□□□□□ -1.94
Scn9a-207ENSMUST00000169900 VwfQ8CIZ8 2813 aa2.93□□□□□ -1.94
Scn9a-207ENSMUST00000169900 Tnp1P10856 55 aa2.91□□□□□ -1.94
Scn9a-207ENSMUST00000169900 Krtap28-10A0A1Y7VP58 119 aa2.91□□□□□ -1.94
Scn9a-207ENSMUST00000169900 Xirp2Q4U4S6 3784 aa2.9□□□□□ -1.94
Scn9a-207ENSMUST00000169900 4933415A04RikQ9D443 101 aa2.9□□□□□ -1.95
Scn9a-207ENSMUST00000169900 Gm21887J3QQ04 176 aa2.89□□□□□ -1.95
Scn9a-207ENSMUST00000169900 Gm2696A0A1W2P709 240 aa2.89□□□□□ -1.95
Scn9a-207ENSMUST00000169900 Gm2310J3QNJ2 377 aa2.89□□□□□ -1.95
Scn9a-207ENSMUST00000169900 D6Ertd527eA0A0N4SWI3 464 aa2.86□□□□□ -1.95
Scn9a-207ENSMUST00000169900 SmcpP15265 143 aa2.85□□□□□ -1.95
Scn9a-207ENSMUST00000169900 4933428G20RikQ9D3X4 101 aa2.85□□□□□ -1.95
Scn9a-207ENSMUST00000169900 A730071L15RikQ8C4X0 137 aa2.85□□□□□ -1.95
Scn9a-207ENSMUST00000169900 A930033H14RikG5E8X6 103 aa2.84□□□□□ -1.95
Scn9a-207ENSMUST00000169900 Hspg2Q05793 3707 aaKnown RBP2.84□□□□□ -1.96
Scn9a-207ENSMUST00000169900 CubnQ9JLB4 3623 aa2.82□□□□□ -1.96
Scn9a-207ENSMUST00000169900 BsnO88737 3942 aa2.82□□□□□ -1.96
Scn9a-207ENSMUST00000169900 Gm9918Q8BUR5 174 aa2.81□□□□□ -1.96
Scn9a-207ENSMUST00000169900 2310057N15RikQ9D6T8 200 aa2.81□□□□□ -1.96
Scn9a-207ENSMUST00000169900 Gm5965D3Z724 196 aa2.8□□□□□ -1.96
Scn9a-207ENSMUST00000169900 Cox6b2Q80ZN9 88 aa2.8□□□□□ -1.96
Scn9a-207ENSMUST00000169900 Ryr1E9PZQ0 5035 aa2.8□□□□□ -1.96
Scn9a-207ENSMUST00000169900 TgO08710 2766 aa2.79□□□□□ -1.96
Scn9a-207ENSMUST00000169900 PlecQ9QXS1 4691 aaKnown RBP2.78□□□□□ -1.97
Scn9a-207ENSMUST00000169900 Gm7544A0A1Y7VJ58 118 aa2.75□□□□□ -1.97
Scn9a-207ENSMUST00000169900 TnxbO35452 4006 aa2.74□□□□□ -1.97
Scn9a-207ENSMUST00000169900 Csmd3Q80T79 3707 aa2.74□□□□□ -1.97
Scn9a-207ENSMUST00000169900 A030003K21RikA0A1Y7VIM3 128 aa2.73□□□□□ -1.97
Scn9a-207ENSMUST00000169900 Krtap28-13A0A087WQP5 138 aa2.73□□□□□ -1.97
Scn9a-207ENSMUST00000169900 Ryr3A2AGL3 4863 aa2.73□□□□□ -1.97
Scn9a-207ENSMUST00000169900 Prm2P07978 107 aa2.72□□□□□ -1.97
Scn9a-207ENSMUST00000169900 A030005L19RikA0A1Y7VIU2 113 aa2.71□□□□□ -1.98
Scn9a-207ENSMUST00000169900 Ryr2E9Q401 4966 aaKnown RBP2.71□□□□□ -1.98
Scn9a-207ENSMUST00000169900 Dnah17Q69Z23 4481 aa2.7□□□□□ -1.98
Scn9a-207ENSMUST00000169900 Dnah3Q8BW94 4083 aa2.69□□□□□ -1.98
Scn9a-207ENSMUST00000169900 A030005K14RikA0A1Y7VNY1 122 aa2.68□□□□□ -1.98
Scn9a-207ENSMUST00000169900 Dnah14A0A140LIJ4 4489 aa2.68□□□□□ -1.98
Scn9a-207ENSMUST00000169900 Kiaa1109A2AAE1 5005 aa2.66□□□□□ -1.98
Scn9a-207ENSMUST00000169900 Dync2h1Q45VK7 4306 aa2.64□□□□□ -1.99
Scn9a-207ENSMUST00000169900 Kmt2aP55200 3966 aa2.64□□□□□ -1.99
Scn9a-207ENSMUST00000169900 HydinQ80W93 5154 aa2.63□□□□□ -1.99
Scn9a-207ENSMUST00000169900 Dnah6E9Q0B6 4144 aa2.63□□□□□ -1.99
Scn9a-207ENSMUST00000169900 Gm40193A0A1B0GT39 78 aa2.6□□□□□ -1.99
Scn9a-207ENSMUST00000169900 Gm9736A0A1W2P7N1 277 aa2.6□□□□□ -1.99
Scn9a-207ENSMUST00000169900 Gm20537G3UYK7 97 aa2.59□□□□□ -2
Scn9a-207ENSMUST00000169900 Gm17416Q30KP4 66 aa2.58□□□□□ -2
Scn9a-207ENSMUST00000169900 Dnah7bL7N1Y0 4068 aa2.58□□□□□ -2
Scn9a-207ENSMUST00000169900 Gm6217A0A1Y7VJK9 128 aa2.57□□□□□ -2
Scn9a-207ENSMUST00000169900 Dnah1E9Q8T7 4250 aa2.56□□□□□ -2
Scn9a-207ENSMUST00000169900 Dnah9B1AR51 4484 aa2.56□□□□□ -2
Scn9a-207ENSMUST00000169900 Birc6O88738 4882 aa2.56□□□□□ -2
Scn9a-207ENSMUST00000169900 Abca13Q5SSE9 5034 aa2.55□□□□□ -2
Scn9a-207ENSMUST00000169900 Huwe1Q7TMY8 4377 aaKnown RBP2.55□□□□□ -2
Scn9a-207ENSMUST00000169900 Lrp1bQ9JI18 4599 aa2.55□□□□□ -2
Scn9a-207ENSMUST00000169900 Herc2Q4U2R1 4836 aa2.55□□□□□ -2
Retrieved 100 of 22,080 RNA–protein pairs in 1683.6 ms