RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 TnxbO35452 4006 aa4.86□□□□□ -1.63
Bdnf-203ENSMUST00000111043 1700012A03RikQ9DAF1 130 aa4.86□□□□□ -1.63
Bdnf-203ENSMUST00000111043 Igkv3-5A0A140T8M6 119 aa4.86□□□□□ -1.63
Bdnf-203ENSMUST00000111043 Gm16485Q8C4B7 115 aa4.85□□□□□ -1.63
Bdnf-203ENSMUST00000111043 Fras1Q80T14 4010 aa4.85□□□□□ -1.63
Bdnf-203ENSMUST00000111043 Defb11Q8R2I7 77 aa4.84□□□□□ -1.63
Bdnf-203ENSMUST00000111043 Prol1E9PYQ4 312 aa4.84□□□□□ -1.63
Bdnf-203ENSMUST00000111043 Wfdc10Q3V2J9 124 aa4.84□□□□□ -1.63
Bdnf-203ENSMUST00000111043 Cypt14J3QPF7 87 aa4.83□□□□□ -1.64
Bdnf-203ENSMUST00000111043 4933415A04RikQ9D443 101 aa4.83□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Defb38Q7TNV7 63 aa4.82□□□□□ -1.64
Bdnf-203ENSMUST00000111043 2310034C09RikQ9D746 214 aa4.82□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Limd2Q8BGB5 128 aa4.81□□□□□ -1.64
Bdnf-203ENSMUST00000111043 A0A286YCP9 139 aa4.81□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Gm20661K7N787 53 aa4.81□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Phf5aP83870 110 aaKnown RBP4.81□□□□□ -1.64
Bdnf-203ENSMUST00000111043 P84750 121 aa4.81□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Smim29Q8R043 75 aa4.81□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Huwe1Q7TMY8 4377 aaKnown RBP4.8□□□□□ -1.64
Bdnf-203ENSMUST00000111043 U90926O08546 118 aa4.8□□□□□ -1.64
Bdnf-203ENSMUST00000111043 SycnQ8VCK7 134 aa4.8□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Dnah3Q8BW94 4083 aa4.8□□□□□ -1.64
Bdnf-203ENSMUST00000111043 PrkdcP97313 4128 aa4.8□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Igkv3-3A0A140T8Q0 119 aa4.8□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Rpl37aP61514 92 aa4.8□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Ly6g6cQ9Z1Q4 126 aa4.8□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Q8K1L6 76 aa4.79□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Igkv3-7A0A0G2JE31 119 aa4.79□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Fam168bQ80XQ8 194 aa4.78□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Gm37013Q8K491 104 aa4.78□□□□□ -1.64
Bdnf-203ENSMUST00000111043 Gm38119A0A0A6YX29 146 aa4.78□□□□□ -1.64
Bdnf-203ENSMUST00000111043 2310061N02RikQ9D6S9 174 aa4.77□□□□□ -1.65
Bdnf-203ENSMUST00000111043 Zcchc13Q9D548 170 aa4.76□□□□□ -1.65
Bdnf-203ENSMUST00000111043 Plac8Q9JI48 112 aa4.76□□□□□ -1.65
Bdnf-203ENSMUST00000111043 Gm6217A0A1Y7VJK9 128 aa4.75□□□□□ -1.65
Bdnf-203ENSMUST00000111043 Defb13Q8R2I4 64 aa4.75□□□□□ -1.65
Bdnf-203ENSMUST00000111043 Nupr2Q497P3 102 aa4.75□□□□□ -1.65
Bdnf-203ENSMUST00000111043 Lce1a1Q9CQH5 143 aa4.74□□□□□ -1.65
Bdnf-203ENSMUST00000111043 Lce1gQ9D195 139 aa4.74□□□□□ -1.65
Bdnf-203ENSMUST00000111043 Dnah17Q69Z23 4481 aa4.73□□□□□ -1.65
Bdnf-203ENSMUST00000111043 Gm3646F6S692 53 aa4.73□□□□□ -1.65
Bdnf-203ENSMUST00000111043 Gm9918Q8BUR5 174 aa4.73□□□□□ -1.65
Bdnf-203ENSMUST00000111043 Uqcr11Q9CPX8 56 aa4.72□□□□□ -1.65
Bdnf-203ENSMUST00000111043 Pla2g10Q9QXX3 151 aa4.69□□□□□ -1.66
Bdnf-203ENSMUST00000111043 Sprr1aQ62266 144 aa4.67□□□□□ -1.66
Bdnf-203ENSMUST00000111043 PlecQ9QXS1 4691 aaKnown RBP4.67□□□□□ -1.66
Bdnf-203ENSMUST00000111043 Dnah11E9Q7N9 4488 aa4.67□□□□□ -1.66
Bdnf-203ENSMUST00000111043 Krtap10-10A0A1W2P7T6 217 aa4.66□□□□□ -1.66
Bdnf-203ENSMUST00000111043 Gm27235Q3UW50 83 aa4.65□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Dnah1E9Q8T7 4250 aa4.64□□□□□ -1.67
Bdnf-203ENSMUST00000111043 AW011738F6S7Q2 159 aa4.64□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Gm10139O88245 57 aa4.64□□□□□ -1.67
Bdnf-203ENSMUST00000111043 1600014C23RikQ9DAX4 101 aa4.64□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Cypt15B1AXS0 87 aa4.63□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Dnah9B1AR51 4484 aa4.63□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Odf3bQ5M8M2 238 aa4.63□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Dnah5Q8VHE6 4621 aa4.62□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Gm2696A0A1W2P709 240 aa4.62□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Gm10642Q3TWM1 71 aa4.61□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Q8BGJ3 129 aa4.61□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Gm2310J3QNJ2 377 aa4.61□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Stard9Q80TF6 4561 aa4.6□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Dnah7aE9Q0T8 4024 aa4.6□□□□□ -1.67
Bdnf-203ENSMUST00000111043 Gm10999F6Q4M4 69 aa4.57□□□□□ -1.68
Bdnf-203ENSMUST00000111043 Rnase13Q5GAM7 153 aa4.57□□□□□ -1.68
Bdnf-203ENSMUST00000111043 Defb9Q8R2I6 67 aa4.57□□□□□ -1.68
Bdnf-203ENSMUST00000111043 Dnah7cA0A087WR13 4024 aa4.57□□□□□ -1.68
Bdnf-203ENSMUST00000111043 Dync2h1Q45VK7 4306 aa4.57□□□□□ -1.68
Bdnf-203ENSMUST00000111043 Krtap13O88375 197 aa4.57□□□□□ -1.68
Bdnf-203ENSMUST00000111043 Gm21798J3QNU5 87 aa4.55□□□□□ -1.68
Bdnf-203ENSMUST00000111043 Adm2Q7TNK8 150 aa4.55□□□□□ -1.68
Bdnf-203ENSMUST00000111043 Ryr3A2AGL3 4863 aa4.54□□□□□ -1.68
Bdnf-203ENSMUST00000111043 Gm19668J3QMD1 248 aa4.53□□□□□ -1.68
Bdnf-203ENSMUST00000111043 6030445D17RikE9Q8F9 148 aa4.52□□□□□ -1.69
Bdnf-203ENSMUST00000111043 Wfdc3Q14AE4 130 aa4.51□□□□□ -1.69
Bdnf-203ENSMUST00000111043 Vps13dB1ART2 4390 aa4.51□□□□□ -1.69
Bdnf-203ENSMUST00000111043 Anapc11Q9CPX9 84 aa4.51□□□□□ -1.69
Bdnf-203ENSMUST00000111043 4930507D05RikQ8C9C9 103 aa4.49□□□□□ -1.69
Bdnf-203ENSMUST00000111043 Defb1P56386 69 aa4.49□□□□□ -1.69
Bdnf-203ENSMUST00000111043 Defb39Q70KL3 74 aa4.49□□□□□ -1.69
Bdnf-203ENSMUST00000111043 Gm16253D3Z167 63 aa4.47□□□□□ -1.69
Bdnf-203ENSMUST00000111043 Gm10065F6TJM2 114 aa4.47□□□□□ -1.69
Bdnf-203ENSMUST00000111043 Romo1P60603 79 aa4.47□□□□□ -1.69
Bdnf-203ENSMUST00000111043 Lce1lQ9D1G7 135 aa4.47□□□□□ -1.69
Bdnf-203ENSMUST00000111043 Krtap29-1A2A5X4 342 aa4.45□□□□□ -1.7
Bdnf-203ENSMUST00000111043 Spaca4Q80ZQ0 127 aa4.45□□□□□ -1.7
Bdnf-203ENSMUST00000111043 Krtap14O08640 167 aa4.43□□□□□ -1.7
Bdnf-203ENSMUST00000111043 RetnlbQ99P86 105 aa4.43□□□□□ -1.7
Bdnf-203ENSMUST00000111043 Gpr15lA0A0B4J1N3 78 aa4.42□□□□□ -1.7
Bdnf-203ENSMUST00000111043 NbdyA0A0N4SUI7 68 aa4.41□□□□□ -1.7
Bdnf-203ENSMUST00000111043 Krtap15-1Q9QZU5 150 aa4.4□□□□□ -1.7
Bdnf-203ENSMUST00000111043 Ryr1E9PZQ0 5035 aa4.4□□□□□ -1.7
Bdnf-203ENSMUST00000111043 Ndufaf8A2AMZ4 74 aa4.37□□□□□ -1.71
Bdnf-203ENSMUST00000111043 Lrp1bQ9JI18 4599 aa4.37□□□□□ -1.71
Bdnf-203ENSMUST00000111043 Pkd1O08852 4293 aa4.36□□□□□ -1.71
Bdnf-203ENSMUST00000111043 Fat1A0A1L1SQU7 4645 aa4.36□□□□□ -1.71
Bdnf-203ENSMUST00000111043 ApobE9Q414 4505 aa4.36□□□□□ -1.71
Bdnf-203ENSMUST00000111043 Gm9112A2AI92 75 aa4.34□□□□□ -1.71
Bdnf-203ENSMUST00000111043 Gm3880A0A1B0GSB3 72 aa4.33□□□□□ -1.72
Bdnf-203ENSMUST00000111043 Tnp2P11378 117 aa4.33□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms