RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Romo1P60603 79 aa4.87□□□□□ -1.63
Scn8a-204ENSMUST00000108909 Myo15aQ9QZZ4 3511 aa4.85□□□□□ -1.63
Scn8a-204ENSMUST00000108909 VcanQ62059 3357 aa4.84□□□□□ -1.63
Scn8a-204ENSMUST00000108909 Col6a3E9PWQ3 3284 aa4.84□□□□□ -1.64
Scn8a-204ENSMUST00000108909 Gm10382Q3V0T5 144 aa4.83□□□□□ -1.64
Scn8a-204ENSMUST00000108909 Cdh23Q99PF4 3354 aa4.81□□□□□ -1.64
Scn8a-204ENSMUST00000108909 Rpl37Q9D823 97 aa4.81□□□□□ -1.64
Scn8a-204ENSMUST00000108909 Fam229aB2KGE5 128 aa4.8□□□□□ -1.64
Scn8a-204ENSMUST00000108909 Gm16253D3Z167 63 aa4.79□□□□□ -1.64
Scn8a-204ENSMUST00000108909 DmdP11531 3678 aa4.78□□□□□ -1.64
Scn8a-204ENSMUST00000108909 Zfhx3Q61329 3726 aa4.77□□□□□ -1.65
Scn8a-204ENSMUST00000108909 Gm2310J3QNJ2 377 aa4.77□□□□□ -1.65
Scn8a-204ENSMUST00000108909 Krtap15-1Q9QZU5 150 aa4.75□□□□□ -1.65
Scn8a-204ENSMUST00000108909 SpegQ62407 3262 aa4.75□□□□□ -1.65
Scn8a-204ENSMUST00000108909 Vps13cQ8BX70 3748 aa4.73□□□□□ -1.65
Scn8a-204ENSMUST00000108909 Ank2Q8C8R3 3898 aa4.7□□□□□ -1.66
Scn8a-204ENSMUST00000108909 Gm36176A0A1W2P8D5 158 aa4.7□□□□□ -1.66
Scn8a-204ENSMUST00000108909 Prm2P07978 107 aa4.7□□□□□ -1.66
Scn8a-204ENSMUST00000108909 Szt2A2A9C3 3431 aa4.7□□□□□ -1.66
Scn8a-204ENSMUST00000108909 Krtap13O88375 197 aa4.69□□□□□ -1.66
Scn8a-204ENSMUST00000108909 OxtP35454 125 aa4.68□□□□□ -1.66
Scn8a-204ENSMUST00000108909 Krtap14O08640 167 aa4.67□□□□□ -1.66
Scn8a-204ENSMUST00000108909 2310050C09RikG5E8Z3 280 aa4.67□□□□□ -1.66
Scn8a-204ENSMUST00000108909 Krtap29-1A2A5X4 342 aa4.66□□□□□ -1.66
Scn8a-204ENSMUST00000108909 Gm11565A2A4M7 156 aa4.65□□□□□ -1.66
Scn8a-204ENSMUST00000108909 Cox6b2Q80ZN9 88 aa4.64□□□□□ -1.67
Scn8a-204ENSMUST00000108909 Gm5767A0A0J9YTU8 78 aa4.63□□□□□ -1.67
Scn8a-204ENSMUST00000108909 Cmya5Q70KF4 3739 aa4.62□□□□□ -1.67
Scn8a-204ENSMUST00000108909 Gm17349F7BGH6 99 aa4.62□□□□□ -1.67
Scn8a-204ENSMUST00000108909 Gm19426M0QWC7 77 aa4.61□□□□□ -1.67
Scn8a-204ENSMUST00000108909 BC029722A0A0N4SW31 51 aa4.58□□□□□ -1.68
Scn8a-204ENSMUST00000108909 Muc6Q80T03 2850 aa4.57□□□□□ -1.68
Scn8a-204ENSMUST00000108909 Smg1Q8BKX6 3658 aaKnown RBP4.57□□□□□ -1.68
Scn8a-204ENSMUST00000108909 D6Ertd527eA0A0N4SWI3 464 aa4.57□□□□□ -1.68
Scn8a-204ENSMUST00000108909 SpenQ62504 3644 aaKnown RBP4.55□□□□□ -1.68
Scn8a-204ENSMUST00000108909 Wdfy3Q6VNB8 3508 aa4.53□□□□□ -1.68
Scn8a-204ENSMUST00000108909 Dchs1E9PVD3 3291 aa4.53□□□□□ -1.68
Scn8a-204ENSMUST00000108909 Gm9507D3Z5T3 223 aa4.53□□□□□ -1.69
Scn8a-204ENSMUST00000108909 Krtap10-4Q08EG8 221 aa4.49□□□□□ -1.69
Scn8a-204ENSMUST00000108909 Gm40193A0A1B0GT39 78 aa4.48□□□□□ -1.69
Scn8a-204ENSMUST00000108909 Gm20537G3UYK7 97 aa4.48□□□□□ -1.69
Scn8a-204ENSMUST00000108909 2310057N15RikQ9D6T8 200 aa4.46□□□□□ -1.7
Scn8a-204ENSMUST00000108909 2310061N02RikQ9D6S9 174 aa4.45□□□□□ -1.7
Scn8a-204ENSMUST00000108909 Csmd1Q923L3 3564 aa4.45□□□□□ -1.7
Scn8a-204ENSMUST00000108909 Tnp2P11378 117 aa4.44□□□□□ -1.7
Scn8a-204ENSMUST00000108909 RelnQ60841 3461 aa4.44□□□□□ -1.7
Scn8a-204ENSMUST00000108909 Krtap10-10A0A1W2P7T6 217 aa4.43□□□□□ -1.7
Scn8a-204ENSMUST00000108909 Lama5Q61001 3718 aa4.43□□□□□ -1.7
Scn8a-204ENSMUST00000108909 BsnO88737 3942 aa4.41□□□□□ -1.7
Scn8a-204ENSMUST00000108909 Rps29P62274 56 aa4.35□□□□□ -1.71
Scn8a-204ENSMUST00000108909 Muc5acE9QAQ8 3455 aa4.35□□□□□ -1.71
Scn8a-204ENSMUST00000108909 Gm5965D3Z724 196 aa4.34□□□□□ -1.71
Scn8a-204ENSMUST00000108909 Gm2696A0A1W2P709 240 aa4.29□□□□□ -1.72
Scn8a-204ENSMUST00000108909 Tnp1P10856 55 aa4.29□□□□□ -1.72
Scn8a-204ENSMUST00000108909 Muc4Q8JZM8 3443 aa4.28□□□□□ -1.72
Scn8a-204ENSMUST00000108909 B930094E09RikQ8C4T2 136 aa4.25□□□□□ -1.73
Scn8a-204ENSMUST00000108909 Zfhx4Q9JJN2 3550 aa4.25□□□□□ -1.73
Scn8a-204ENSMUST00000108909 2310079G19RikQ9D6L6 185 aa4.24□□□□□ -1.73
Scn8a-204ENSMUST00000108909 Gm884A2A9H6 3643 aa4.24□□□□□ -1.73
Scn8a-204ENSMUST00000108909 A930033H14RikG5E8X6 103 aa4.18□□□□□ -1.74
Scn8a-204ENSMUST00000108909 Csmd2V9GX34 3611 aa4.17□□□□□ -1.74
Scn8a-204ENSMUST00000108909 LystP97412 3788 aa4.14□□□□□ -1.75
Scn8a-204ENSMUST00000108909 Xirp2Q4U4S6 3784 aa4.13□□□□□ -1.75
Scn8a-204ENSMUST00000108909 Csmd3Q80T79 3707 aa4.1□□□□□ -1.75
Scn8a-204ENSMUST00000108909 4933428G20RikQ9D3X4 101 aa4.08□□□□□ -1.76
Scn8a-204ENSMUST00000108909 Dnah3Q8BW94 4083 aa4.03□□□□□ -1.76
Scn8a-204ENSMUST00000108909 Gm17416Q30KP4 66 aa4.03□□□□□ -1.76
Scn8a-204ENSMUST00000108909 Svep1A2AVA0 3567 aa4□□□□□ -1.77
Scn8a-204ENSMUST00000108909 Gm9736A0A1W2P7N1 277 aa3.98□□□□□ -1.77
Scn8a-204ENSMUST00000108909 Hspg2Q05793 3707 aaKnown RBP3.96□□□□□ -1.77
Scn8a-204ENSMUST00000108909 2210017I01RikA0A0A6YVV1 95 aa3.92□□□□□ -1.78
Scn8a-204ENSMUST00000108909 Gm17402F6Z0L5 76 aa3.92□□□□□ -1.78
Scn8a-204ENSMUST00000108909 Vps13bQ80TY5 3993 aa3.88□□□□□ -1.79
Scn8a-204ENSMUST00000108909 Gm9918Q8BUR5 174 aa3.88□□□□□ -1.79
Scn8a-204ENSMUST00000108909 Dnah7bL7N1Y0 4068 aa3.84□□□□□ -1.79
Scn8a-204ENSMUST00000108909 Gm11939A2A592 99 aa3.83□□□□□ -1.8
Scn8a-204ENSMUST00000108909 CubnQ9JLB4 3623 aa3.82□□□□□ -1.8
Scn8a-204ENSMUST00000108909 Dnah7aE9Q0T8 4024 aa3.81□□□□□ -1.8
Scn8a-204ENSMUST00000108909 Gm10318A0A1W2P728 225 aa3.79□□□□□ -1.8
Scn8a-204ENSMUST00000108909 Dnah7cA0A087WR13 4024 aa3.79□□□□□ -1.8
Scn8a-204ENSMUST00000108909 Gm19668J3QMD1 248 aa3.78□□□□□ -1.8
Scn8a-204ENSMUST00000108909 Krtap3-2Q9D638 99 aa3.77□□□□□ -1.81
Scn8a-204ENSMUST00000108909 Krtap3-3Q9D7P0 99 aa3.77□□□□□ -1.81
Scn8a-204ENSMUST00000108909 Krtap13-1Q8K198 168 aa3.76□□□□□ -1.81
Scn8a-204ENSMUST00000108909 Krtap3-1A2A591 98 aa3.73□□□□□ -1.81
Scn8a-204ENSMUST00000108909 Crct1Q6PAI5 102 aa3.68□□□□□ -1.82
Scn8a-204ENSMUST00000108909 Krtap7-1Q9D3I6 87 aa3.63□□□□□ -1.83
Scn8a-204ENSMUST00000108909 Krtap19-5O08632 62 aa3.6□□□□□ -1.83
Scn8a-204ENSMUST00000108909 Kmt2aP55200 3966 aa3.58□□□□□ -1.84
Scn8a-204ENSMUST00000108909 Dnah6E9Q0B6 4144 aa3.57□□□□□ -1.84
Scn8a-204ENSMUST00000108909 PrkdcP97313 4128 aa3.56□□□□□ -1.84
Scn8a-204ENSMUST00000108909 Dnah10D3YYQ8 4591 aa3.55□□□□□ -1.84
Scn8a-204ENSMUST00000108909 Vps13dB1ART2 4390 aa3.54□□□□□ -1.84
Scn8a-204ENSMUST00000108909 Huwe1Q7TMY8 4377 aaKnown RBP3.53□□□□□ -1.84
Scn8a-204ENSMUST00000108909 Dnah14A0A140LIJ4 4489 aa3.51□□□□□ -1.85
Scn8a-204ENSMUST00000108909 Dnah1E9Q8T7 4250 aa3.49□□□□□ -1.85
Scn8a-204ENSMUST00000108909 Hectd4E9Q2E4 4418 aa3.48□□□□□ -1.85
Scn8a-204ENSMUST00000108909 TnxbO35452 4006 aa3.47□□□□□ -1.85
Scn8a-204ENSMUST00000108909 Fras1Q80T14 4010 aa3.47□□□□□ -1.85
Scn8a-204ENSMUST00000108909 Pkhd1E9PZ36 4059 aa3.45□□□□□ -1.86
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms