RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Adgrg4B7ZCC9 3073 aa4.12□□□□□ -1.75
Scn3a-201ENSMUST00000066432 Gm7138L7N2C3 230 aa4.11□□□□□ -1.75
Scn3a-201ENSMUST00000066432 Gm3238W4VSP7 230 aa4.11□□□□□ -1.75
Scn3a-201ENSMUST00000066432 Gm36176A0A1W2P8D5 158 aa4.09□□□□□ -1.76
Scn3a-201ENSMUST00000066432 Gm10382Q3V0T5 144 aa4.08□□□□□ -1.76
Scn3a-201ENSMUST00000066432 Krtap13O88375 197 aa4.07□□□□□ -1.76
Scn3a-201ENSMUST00000066432 Ndufaf8A2AMZ4 74 aa4.07□□□□□ -1.76
Scn3a-201ENSMUST00000066432 VwfQ8CIZ8 2813 aa4.07□□□□□ -1.76
Scn3a-201ENSMUST00000066432 OtogO55225 2910 aa4.02□□□□□ -1.77
Scn3a-201ENSMUST00000066432 Gm17416Q30KP4 66 aa4□□□□□ -1.77
Scn3a-201ENSMUST00000066432 Gm7137J3QMW1 236 aa4□□□□□ -1.77
Scn3a-201ENSMUST00000066432 Helz2E9QAM5 2947 aaKnown RBP4□□□□□ -1.77
Scn3a-201ENSMUST00000066432 Lama1P19137 3084 aa3.99□□□□□ -1.77
Scn3a-201ENSMUST00000066432 Cdh23Q99PF4 3354 aa3.97□□□□□ -1.77
Scn3a-201ENSMUST00000066432 A930033H14RikG5E8X6 103 aa3.97□□□□□ -1.77
Scn3a-201ENSMUST00000066432 Gm17402F6Z0L5 76 aa3.96□□□□□ -1.78
Scn3a-201ENSMUST00000066432 Gm9112A2AI92 75 aa3.96□□□□□ -1.78
Scn3a-201ENSMUST00000066432 Lrrc37aB1AWG4 3215 aa3.94□□□□□ -1.78
Scn3a-201ENSMUST00000066432 Tnp1P10856 55 aa3.94□□□□□ -1.78
Scn3a-201ENSMUST00000066432 Frem2Q6NVD0 3160 aa3.93□□□□□ -1.78
Scn3a-201ENSMUST00000066432 Szt2A2A9C3 3431 aa3.9□□□□□ -1.78
Scn3a-201ENSMUST00000066432 Tenm2Q9WTS5 2764 aa3.89□□□□□ -1.79
Scn3a-201ENSMUST00000066432 Gm21887J3QQ04 176 aa3.88□□□□□ -1.79
Scn3a-201ENSMUST00000066432 Gm20537G3UYK7 97 aa3.88□□□□□ -1.79
Scn3a-201ENSMUST00000066432 Fbn1Q61554 2873 aaKnown RBP3.87□□□□□ -1.79
Scn3a-201ENSMUST00000066432 Gm9508A0A1W2P7W0 230 aa3.86□□□□□ -1.79
Scn3a-201ENSMUST00000066432 Vps13cQ8BX70 3748 aa3.82□□□□□ -1.8
Scn3a-201ENSMUST00000066432 2310079G19RikQ9D6L6 185 aa3.82□□□□□ -1.8
Scn3a-201ENSMUST00000066432 2210017I01RikA0A0A6YVV1 95 aa3.81□□□□□ -1.8
Scn3a-201ENSMUST00000066432 Gm9507D3Z5T3 223 aa3.81□□□□□ -1.8
Scn3a-201ENSMUST00000066432 Muc6Q80T03 2850 aa3.8□□□□□ -1.8
Scn3a-201ENSMUST00000066432 Unc80Q8BLN6 3261 aa3.78□□□□□ -1.8
Scn3a-201ENSMUST00000066432 B930094E09RikQ8C4T2 136 aa3.78□□□□□ -1.8
Scn3a-201ENSMUST00000066432 Col7a1Q63870 2944 aa3.77□□□□□ -1.81
Scn3a-201ENSMUST00000066432 Akap9Q70FJ1 3797 aa3.75□□□□□ -1.81
Scn3a-201ENSMUST00000066432 Gm5965D3Z724 196 aa3.71□□□□□ -1.82
Scn3a-201ENSMUST00000066432 Celsr3Q91ZI0 3301 aa3.7□□□□□ -1.82
Scn3a-201ENSMUST00000066432 Dchs2A0A0A6YW72 3346 aa3.69□□□□□ -1.82
Scn3a-201ENSMUST00000066432 SpegQ62407 3262 aa3.69□□□□□ -1.82
Scn3a-201ENSMUST00000066432 DmdP11531 3678 aa3.68□□□□□ -1.82
Scn3a-201ENSMUST00000066432 Prm2P07978 107 aa3.65□□□□□ -1.83
Scn3a-201ENSMUST00000066432 Krtap10-4Q08EG8 221 aa3.65□□□□□ -1.83
Scn3a-201ENSMUST00000066432 2310057N15RikQ9D6T8 200 aa3.65□□□□□ -1.83
Scn3a-201ENSMUST00000066432 Gm2696A0A1W2P709 240 aa3.61□□□□□ -1.83
Scn3a-201ENSMUST00000066432 Krtap10-10A0A1W2P7T6 217 aa3.6□□□□□ -1.83
Scn3a-201ENSMUST00000066432 Brca2P97929 3329 aa3.58□□□□□ -1.84
Scn3a-201ENSMUST00000066432 Zfhx4Q9JJN2 3550 aa3.57□□□□□ -1.84
Scn3a-201ENSMUST00000066432 Zfhx3Q61329 3726 aa3.57□□□□□ -1.84
Scn3a-201ENSMUST00000066432 Col6a3E9PWQ3 3284 aa3.55□□□□□ -1.84
Scn3a-201ENSMUST00000066432 Myo15aQ9QZZ4 3511 aa3.55□□□□□ -1.84
Scn3a-201ENSMUST00000066432 Gm11939A2A592 99 aa3.54□□□□□ -1.84
Scn3a-201ENSMUST00000066432 Lama5Q61001 3718 aa3.51□□□□□ -1.85
Scn3a-201ENSMUST00000066432 VcanQ62059 3357 aa3.51□□□□□ -1.85
Scn3a-201ENSMUST00000066432 Muc4Q8JZM8 3443 aa3.51□□□□□ -1.85
Scn3a-201ENSMUST00000066432 4933428G20RikQ9D3X4 101 aa3.5□□□□□ -1.85
Scn3a-201ENSMUST00000066432 Muc5acE9QAQ8 3455 aa3.49□□□□□ -1.85
Scn3a-201ENSMUST00000066432 RelnQ60841 3461 aa3.48□□□□□ -1.85
Scn3a-201ENSMUST00000066432 Gm19668J3QMD1 248 aa3.47□□□□□ -1.85
Scn3a-201ENSMUST00000066432 Krtap19-5O08632 62 aa3.45□□□□□ -1.86
Scn3a-201ENSMUST00000066432 Dnah7bL7N1Y0 4068 aa3.45□□□□□ -1.86
Scn3a-201ENSMUST00000066432 Krtap3-2Q9D638 99 aa3.45□□□□□ -1.86
Scn3a-201ENSMUST00000066432 Krtap3-3Q9D7P0 99 aa3.45□□□□□ -1.86
Scn3a-201ENSMUST00000066432 BsnO88737 3942 aa3.44□□□□□ -1.86
Scn3a-201ENSMUST00000066432 Wdfy3Q6VNB8 3508 aa3.43□□□□□ -1.86
Scn3a-201ENSMUST00000066432 Dchs1E9PVD3 3291 aa3.42□□□□□ -1.86
Scn3a-201ENSMUST00000066432 Dnah3Q8BW94 4083 aa3.42□□□□□ -1.86
Scn3a-201ENSMUST00000066432 TnxbO35452 4006 aa3.42□□□□□ -1.86
Scn3a-201ENSMUST00000066432 Smg1Q8BKX6 3658 aaKnown RBP3.39□□□□□ -1.87
Scn3a-201ENSMUST00000066432 Krtap13-1Q8K198 168 aa3.39□□□□□ -1.87
Scn3a-201ENSMUST00000066432 Krtap3-1A2A591 98 aa3.37□□□□□ -1.87
Scn3a-201ENSMUST00000066432 SpenQ62504 3644 aaKnown RBP3.34□□□□□ -1.88
Scn3a-201ENSMUST00000066432 Gm9918Q8BUR5 174 aa3.34□□□□□ -1.88
Scn3a-201ENSMUST00000066432 Huwe1Q7TMY8 4377 aaKnown RBP3.33□□□□□ -1.88
Scn3a-201ENSMUST00000066432 Krtap1-5A2A590 122 aa3.32□□□□□ -1.88
Scn3a-201ENSMUST00000066432 Xirp2Q4U4S6 3784 aa3.31□□□□□ -1.88
Scn3a-201ENSMUST00000066432 Cmya5Q70KF4 3739 aa3.31□□□□□ -1.88
Scn3a-201ENSMUST00000066432 Dnah7cA0A087WR13 4024 aa3.3□□□□□ -1.88
Scn3a-201ENSMUST00000066432 Dnah7aE9Q0T8 4024 aa3.29□□□□□ -1.88
Scn3a-201ENSMUST00000066432 Gm884A2A9H6 3643 aa3.27□□□□□ -1.89
Scn3a-201ENSMUST00000066432 Gm9736A0A1W2P7N1 277 aa3.26□□□□□ -1.89
Scn3a-201ENSMUST00000066432 LystP97412 3788 aa3.24□□□□□ -1.89
Scn3a-201ENSMUST00000066432 Sprr2a3Q4KL71 83 aa3.23□□□□□ -1.89
Scn3a-201ENSMUST00000066432 Sprr2a1Q9CQK8 83 aa3.23□□□□□ -1.89
Scn3a-201ENSMUST00000066432 Svep1A2AVA0 3567 aa3.21□□□□□ -1.9
Scn3a-201ENSMUST00000066432 Krtap19-9aF8WH65 55 aa3.21□□□□□ -1.9
Scn3a-201ENSMUST00000066432 PrkdcP97313 4128 aa3.21□□□□□ -1.9
Scn3a-201ENSMUST00000066432 Fras1Q80T14 4010 aa3.2□□□□□ -1.9
Scn3a-201ENSMUST00000066432 A0A1Y7VLE6 161 aa3.18□□□□□ -1.9
Scn3a-201ENSMUST00000066432 Csmd1Q923L3 3564 aa3.17□□□□□ -1.9
Scn3a-201ENSMUST00000066432 Dnah6E9Q0B6 4144 aa3.15□□□□□ -1.91
Scn3a-201ENSMUST00000066432 Kmt2aP55200 3966 aa3.14□□□□□ -1.91
Scn3a-201ENSMUST00000066432 Csmd2V9GX34 3611 aa3.14□□□□□ -1.91
Scn3a-201ENSMUST00000066432 Krtap19-9bQ99NG9 58 aa3.13□□□□□ -1.91
Scn3a-201ENSMUST00000066432 Vps13bQ80TY5 3993 aa3.12□□□□□ -1.91
Scn3a-201ENSMUST00000066432 Dnah1E9Q8T7 4250 aa3.11□□□□□ -1.91
Scn3a-201ENSMUST00000066432 Vps13dB1ART2 4390 aa3.1□□□□□ -1.91
Scn3a-201ENSMUST00000066432 CubnQ9JLB4 3623 aa3.1□□□□□ -1.91
Scn3a-201ENSMUST00000066432 Krtap1-4Q3V2D6 188 aa3.09□□□□□ -1.91
Scn3a-201ENSMUST00000066432 Dnah14A0A140LIJ4 4489 aa3.07□□□□□ -1.92
Scn3a-201ENSMUST00000066432 Dync2h1Q45VK7 4306 aa3.06□□□□□ -1.92
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms