RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Gm10999F6Q4M4 69 aa7.21□□□□□ -1.26
Trim23-201ENSMUST00000022225 Anapc11Q9CPX9 84 aa7.2□□□□□ -1.26
Trim23-201ENSMUST00000022225 Dnah14A0A140LIJ4 4489 aa7.19□□□□□ -1.26
Trim23-201ENSMUST00000022225 Dnah10D3YYQ8 4591 aa7.18□□□□□ -1.26
Trim23-201ENSMUST00000022225 Gm9508A0A1W2P7W0 230 aa7.17□□□□□ -1.26
Trim23-201ENSMUST00000022225 Znf706Q9D115 76 aaKnown RBP7.17□□□□□ -1.26
Trim23-201ENSMUST00000022225 2310079G19RikQ9D6L6 185 aa7.16□□□□□ -1.26
Trim23-201ENSMUST00000022225 Defb1P56386 69 aa7.15□□□□□ -1.26
Trim23-201ENSMUST00000022225 Gm10065F6TJM2 114 aa7.12□□□□□ -1.27
Trim23-201ENSMUST00000022225 Gm20538F6Z9R1 75 aa7.11□□□□□ -1.27
Trim23-201ENSMUST00000022225 Krtap29-1A2A5X4 342 aa7.1□□□□□ -1.27
Trim23-201ENSMUST00000022225 Dnah6E9Q0B6 4144 aa7.07□□□□□ -1.28
Trim23-201ENSMUST00000022225 Nupr2Q497P3 102 aa7.07□□□□□ -1.28
Trim23-201ENSMUST00000022225 Gm7137J3QMW1 236 aa7.07□□□□□ -1.28
Trim23-201ENSMUST00000022225 Dync2h1Q45VK7 4306 aa7.06□□□□□ -1.28
Trim23-201ENSMUST00000022225 Defb39Q70KL3 74 aa7.06□□□□□ -1.28
Trim23-201ENSMUST00000022225 Stab1Q8R4Y4 2571 aa7.06□□□□□ -1.28
Trim23-201ENSMUST00000022225 NbdyA0A0N4SUI7 68 aa7.05□□□□□ -1.28
Trim23-201ENSMUST00000022225 Gm36176A0A1W2P8D5 158 aa7.05□□□□□ -1.28
Trim23-201ENSMUST00000022225 Mp68P56379 58 aa7.04□□□□□ -1.28
Trim23-201ENSMUST00000022225 Igsf10Q3V1M1 2594 aa7.04□□□□□ -1.28
Trim23-201ENSMUST00000022225 Adm2Q7TNK8 150 aa7.04□□□□□ -1.28
Trim23-201ENSMUST00000022225 Romo1P60603 79 aa7.01□□□□□ -1.29
Trim23-201ENSMUST00000022225 Krtap14O08640 167 aa7□□□□□ -1.29
Trim23-201ENSMUST00000022225 Wfdc3Q14AE4 130 aa6.99□□□□□ -1.29
Trim23-201ENSMUST00000022225 Hectd4E9Q2E4 4418 aa6.98□□□□□ -1.29
Trim23-201ENSMUST00000022225 Gm20537G3UYK7 97 aa6.98□□□□□ -1.29
Trim23-201ENSMUST00000022225 A930033H14RikG5E8X6 103 aa6.97□□□□□ -1.29
Trim23-201ENSMUST00000022225 Tnp2P11378 117 aa6.97□□□□□ -1.29
Trim23-201ENSMUST00000022225 Krtap3-2Q9D638 99 aa6.97□□□□□ -1.29
Trim23-201ENSMUST00000022225 Krtap3-3Q9D7P0 99 aa6.97□□□□□ -1.29
Trim23-201ENSMUST00000022225 D6Ertd527eA0A0N4SWI3 464 aa6.97□□□□□ -1.29
Trim23-201ENSMUST00000022225 2310050C09RikG5E8Z3 280 aa6.97□□□□□ -1.29
Trim23-201ENSMUST00000022225 Gm3880A0A1B0GSB3 72 aa6.96□□□□□ -1.3
Trim23-201ENSMUST00000022225 Spaca4Q80ZQ0 127 aa6.95□□□□□ -1.3
Trim23-201ENSMUST00000022225 4930507D05RikQ8C9C9 103 aa6.95□□□□□ -1.3
Trim23-201ENSMUST00000022225 Pkd1l1Q8R526 2615 aa6.95□□□□□ -1.3
Trim23-201ENSMUST00000022225 Wfdc17Q5SSJ1 76 aa6.94□□□□□ -1.3
Trim23-201ENSMUST00000022225 Muc6Q80T03 2850 aa6.94□□□□□ -1.3
Trim23-201ENSMUST00000022225 Krtap13O88375 197 aa6.91□□□□□ -1.3
Trim23-201ENSMUST00000022225 Fn1P11276 2477 aaKnown RBP6.91□□□□□ -1.3
Trim23-201ENSMUST00000022225 Gpr15lA0A0B4J1N3 78 aa6.9□□□□□ -1.31
Trim23-201ENSMUST00000022225 Dnah2P0C6F1 4456 aa6.88□□□□□ -1.31
Trim23-201ENSMUST00000022225 Dnah7aE9Q0T8 4024 aa6.88□□□□□ -1.31
Trim23-201ENSMUST00000022225 Stab2Q8R4U0 2559 aa6.88□□□□□ -1.31
Trim23-201ENSMUST00000022225 Huwe1Q7TMY8 4377 aaKnown RBP6.87□□□□□ -1.31
Trim23-201ENSMUST00000022225 9530053A07RikE9PVG8 2581 aa6.86□□□□□ -1.31
Trim23-201ENSMUST00000022225 1600014C23RikQ9DAX4 101 aa6.86□□□□□ -1.31
Trim23-201ENSMUST00000022225 Fras1Q80T14 4010 aa6.85□□□□□ -1.31
Trim23-201ENSMUST00000022225 Dnah7cA0A087WR13 4024 aa6.84□□□□□ -1.31
Trim23-201ENSMUST00000022225 Dnah5Q8VHE6 4621 aa6.83□□□□□ -1.32
Trim23-201ENSMUST00000022225 CriptO70333 101 aa6.81□□□□□ -1.32
Trim23-201ENSMUST00000022225 Vps13dB1ART2 4390 aa6.8□□□□□ -1.32
Trim23-201ENSMUST00000022225 Gm4491E0CX42 125 aa6.8□□□□□ -1.32
Trim23-201ENSMUST00000022225 PlecQ9QXS1 4691 aaKnown RBP6.78□□□□□ -1.32
Trim23-201ENSMUST00000022225 Gm9918Q8BUR5 174 aa6.76□□□□□ -1.33
Trim23-201ENSMUST00000022225 Cox6b2Q80ZN9 88 aa6.74□□□□□ -1.33
Trim23-201ENSMUST00000022225 ApobE9Q414 4505 aa6.72□□□□□ -1.33
Trim23-201ENSMUST00000022225 Stard9Q80TF6 4561 aa6.72□□□□□ -1.33
Trim23-201ENSMUST00000022225 PrkdcP97313 4128 aa6.7□□□□□ -1.34
Trim23-201ENSMUST00000022225 Gm17349F7BGH6 99 aa6.69□□□□□ -1.34
Trim23-201ENSMUST00000022225 Gm9507D3Z5T3 223 aa6.66□□□□□ -1.34
Trim23-201ENSMUST00000022225 Pkd1O08852 4293 aa6.65□□□□□ -1.34
Trim23-201ENSMUST00000022225 Lrp1bQ9JI18 4599 aa6.65□□□□□ -1.34
Trim23-201ENSMUST00000022225 Gm9955Q8CEJ8 102 aa6.64□□□□□ -1.35
Trim23-201ENSMUST00000022225 Prm2P07978 107 aa6.63□□□□□ -1.35
Trim23-201ENSMUST00000022225 FcgbpE9Q0B5 2583 aa6.58□□□□□ -1.36
Trim23-201ENSMUST00000022225 TnxbO35452 4006 aa6.58□□□□□ -1.36
Trim23-201ENSMUST00000022225 Pkhd1E9PZ36 4059 aa6.56□□□□□ -1.36
Trim23-201ENSMUST00000022225 Gm11939A2A592 99 aa6.55□□□□□ -1.36
Trim23-201ENSMUST00000022225 Gm10382Q3V0T5 144 aa6.54□□□□□ -1.36
Trim23-201ENSMUST00000022225 Rpl37Q9D823 97 aa6.53□□□□□ -1.36
Trim23-201ENSMUST00000022225 Krtap10-10A0A1W2P7T6 217 aa6.52□□□□□ -1.37
Trim23-201ENSMUST00000022225 Krtap10-4Q08EG8 221 aa6.51□□□□□ -1.37
Trim23-201ENSMUST00000022225 SacsQ9JLC8 4582 aa6.5□□□□□ -1.37
Trim23-201ENSMUST00000022225 Ndufaf8A2AMZ4 74 aa6.48□□□□□ -1.37
Trim23-201ENSMUST00000022225 Defb10Q8R2I8 73 aa6.47□□□□□ -1.37
Trim23-201ENSMUST00000022225 Rps29P62274 56 aa6.46□□□□□ -1.38
Trim23-201ENSMUST00000022225 Vps13bQ80TY5 3993 aa6.44□□□□□ -1.38
Trim23-201ENSMUST00000022225 Gm17606F6ZL36 78 aa6.4□□□□□ -1.39
Trim23-201ENSMUST00000022225 Gm21887J3QQ04 176 aa6.39□□□□□ -1.39
Trim23-201ENSMUST00000022225 Fat2Q5F226 4351 aa6.39□□□□□ -1.39
Trim23-201ENSMUST00000022225 Ly6g6cQ9Z1Q4 126 aa6.37□□□□□ -1.39
Trim23-201ENSMUST00000022225 Pkhd1l1Q80ZA4 4249 aa6.32□□□□□ -1.4
Trim23-201ENSMUST00000022225 Rnase13Q5GAM7 153 aa6.31□□□□□ -1.4
Trim23-201ENSMUST00000022225 Krtap7-1Q9D3I6 87 aa6.25□□□□□ -1.41
Trim23-201ENSMUST00000022225 Gm5767A0A0J9YTU8 78 aa6.24□□□□□ -1.41
Trim23-201ENSMUST00000022225 Krtap3-1A2A591 98 aa6.22□□□□□ -1.41
Trim23-201ENSMUST00000022225 Gm2696A0A1W2P709 240 aa6.22□□□□□ -1.41
Trim23-201ENSMUST00000022225 Gm19426M0QWC7 77 aa6.2□□□□□ -1.42
Trim23-201ENSMUST00000022225 RetnlbQ99P86 105 aa6.18□□□□□ -1.42
Trim23-201ENSMUST00000022225 B930094E09RikQ8C4T2 136 aa6.15□□□□□ -1.42
Trim23-201ENSMUST00000022225 Lrp1Q91ZX7 4545 aaKnown RBP6.14□□□□□ -1.43
Trim23-201ENSMUST00000022225 Gm5965D3Z724 196 aa6.14□□□□□ -1.43
Trim23-201ENSMUST00000022225 Fat1A0A1L1SQU7 4645 aa6.13□□□□□ -1.43
Trim23-201ENSMUST00000022225 Dync1h1Q9JHU4 4644 aaKnown RBP6.1□□□□□ -1.43
Trim23-201ENSMUST00000022225 Fat3Q8BNA6 4555 aa6.07□□□□□ -1.44
Trim23-201ENSMUST00000022225 Gm19668J3QMD1 248 aa6.05□□□□□ -1.44
Trim23-201ENSMUST00000022225 Gm17416Q30KP4 66 aa6.05□□□□□ -1.44
Trim23-201ENSMUST00000022225 Gm40193A0A1B0GT39 78 aa6.05□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 78.3 ms