RNA–Protein interactions for RNA: ENSMUST00000004949.7

Traf6-201, Transcript of TNF receptor-associated factor 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf6, Length 6,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6-201ENSMUST00000004949 Gm3880A0A1B0GSB3 72 aa7.8□□□□□ -1.16
Traf6-201ENSMUST00000004949 Pla2g10Q9QXX3 151 aa7.8□□□□□ -1.16
Traf6-201ENSMUST00000004949 Pdzd2E9Q1M1 2796 aa7.79□□□□□ -1.16
Traf6-201ENSMUST00000004949 ApcQ61315 2845 aa7.79□□□□□ -1.16
Traf6-201ENSMUST00000004949 Gm37013Q8K491 104 aa7.79□□□□□ -1.16
Traf6-201ENSMUST00000004949 Srrm2Q8BTI8 2703 aaKnown RBP7.77□□□□□ -1.17
Traf6-201ENSMUST00000004949 Gm10643Q3URG9 111 aa7.76□□□□□ -1.17
Traf6-201ENSMUST00000004949 Gm5767A0A0J9YTU8 78 aa7.72□□□□□ -1.17
Traf6-201ENSMUST00000004949 Fam229aB2KGE5 128 aa7.72□□□□□ -1.17
Traf6-201ENSMUST00000004949 Gm9955Q8CEJ8 102 aa7.7□□□□□ -1.18
Traf6-201ENSMUST00000004949 Csmd1Q923L3 3564 aa7.7□□□□□ -1.18
Traf6-201ENSMUST00000004949 TgO08710 2766 aa7.7□□□□□ -1.18
Traf6-201ENSMUST00000004949 Smg1Q8BKX6 3658 aaKnown RBP7.69□□□□□ -1.18
Traf6-201ENSMUST00000004949 Sec61bQ9CQS8 96 aaKnown RBP7.67□□□□□ -1.18
Traf6-201ENSMUST00000004949 Lama5Q61001 3718 aa7.67□□□□□ -1.18
Traf6-201ENSMUST00000004949 Tnp2P11378 117 aa7.64□□□□□ -1.19
Traf6-201ENSMUST00000004949 Zfhx4Q9JJN2 3550 aa7.63□□□□□ -1.19
Traf6-201ENSMUST00000004949 SpenQ62504 3644 aaKnown RBP7.61□□□□□ -1.19
Traf6-201ENSMUST00000004949 CriptO70333 101 aa7.6□□□□□ -1.19
Traf6-201ENSMUST00000004949 Helz2E9QAM5 2947 aaKnown RBP7.59□□□□□ -1.19
Traf6-201ENSMUST00000004949 OtogO55225 2910 aa7.58□□□□□ -1.2
Traf6-201ENSMUST00000004949 Gm19426M0QWC7 77 aa7.46□□□□□ -1.21
Traf6-201ENSMUST00000004949 Camk2n1Q6QWF9 78 aa7.46□□□□□ -1.22
Traf6-201ENSMUST00000004949 Gm2310J3QNJ2 377 aa7.45□□□□□ -1.22
Traf6-201ENSMUST00000004949 Gm884A2A9H6 3643 aa7.45□□□□□ -1.22
Traf6-201ENSMUST00000004949 Gm20538F6Z9R1 75 aa7.43□□□□□ -1.22
Traf6-201ENSMUST00000004949 Tenm1Q9WTS4 2731 aa7.43□□□□□ -1.22
Traf6-201ENSMUST00000004949 BC029722A0A0N4SW31 51 aa7.4□□□□□ -1.22
Traf6-201ENSMUST00000004949 Tenm2Q9WTS5 2764 aa7.4□□□□□ -1.22
Traf6-201ENSMUST00000004949 Gm5965D3Z724 196 aa7.4□□□□□ -1.23
Traf6-201ENSMUST00000004949 Svep1A2AVA0 3567 aa7.35□□□□□ -1.23
Traf6-201ENSMUST00000004949 2310057N15RikQ9D6T8 200 aa7.35□□□□□ -1.23
Traf6-201ENSMUST00000004949 Rps29P62274 56 aa7.34□□□□□ -1.23
Traf6-201ENSMUST00000004949 Gm3646F6S692 53 aa7.34□□□□□ -1.24
Traf6-201ENSMUST00000004949 Rpl37Q9D823 97 aa7.32□□□□□ -1.24
Traf6-201ENSMUST00000004949 Fbn1Q61554 2873 aaKnown RBP7.24□□□□□ -1.25
Traf6-201ENSMUST00000004949 Cmya5Q70KF4 3739 aa7.24□□□□□ -1.25
Traf6-201ENSMUST00000004949 Gm10382Q3V0T5 144 aa7.22□□□□□ -1.25
Traf6-201ENSMUST00000004949 Col7a1Q63870 2944 aa7.2□□□□□ -1.26
Traf6-201ENSMUST00000004949 Romo1P60603 79 aa7.2□□□□□ -1.26
Traf6-201ENSMUST00000004949 Cox6b2Q80ZN9 88 aa7.2□□□□□ -1.26
Traf6-201ENSMUST00000004949 VwfQ8CIZ8 2813 aa7.18□□□□□ -1.26
Traf6-201ENSMUST00000004949 D6Ertd527eA0A0N4SWI3 464 aa7.17□□□□□ -1.26
Traf6-201ENSMUST00000004949 Muc4Q8JZM8 3443 aa7.17□□□□□ -1.26
Traf6-201ENSMUST00000004949 Csmd2V9GX34 3611 aa7.14□□□□□ -1.27
Traf6-201ENSMUST00000004949 Gm9736A0A1W2P7N1 277 aa7.12□□□□□ -1.27
Traf6-201ENSMUST00000004949 4933415A04RikQ9D443 101 aa7.12□□□□□ -1.27
Traf6-201ENSMUST00000004949 SmcpP15265 143 aa7.03□□□□□ -1.28
Traf6-201ENSMUST00000004949 A930033H14RikG5E8X6 103 aa7□□□□□ -1.29
Traf6-201ENSMUST00000004949 Ank2Q8C8R3 3898 aa6.93□□□□□ -1.3
Traf6-201ENSMUST00000004949 1700042G07RikB1AUF7 90 aa6.91□□□□□ -1.3
Traf6-201ENSMUST00000004949 Gm9918Q8BUR5 174 aa6.89□□□□□ -1.31
Traf6-201ENSMUST00000004949 Gm21887J3QQ04 176 aa6.88□□□□□ -1.31
Traf6-201ENSMUST00000004949 Muc6Q80T03 2850 aa6.88□□□□□ -1.31
Traf6-201ENSMUST00000004949 Megf8P60882 2789 aa6.83□□□□□ -1.32
Traf6-201ENSMUST00000004949 Gm10318A0A1W2P728 225 aa6.8□□□□□ -1.32
Traf6-201ENSMUST00000004949 CubnQ9JLB4 3623 aa6.72□□□□□ -1.33
Traf6-201ENSMUST00000004949 LystP97412 3788 aa6.72□□□□□ -1.33
Traf6-201ENSMUST00000004949 Gm20537G3UYK7 97 aa6.71□□□□□ -1.34
Traf6-201ENSMUST00000004949 Krtap19-5O08632 62 aa6.7□□□□□ -1.34
Traf6-201ENSMUST00000004949 2310079G19RikQ9D6L6 185 aa6.69□□□□□ -1.34
Traf6-201ENSMUST00000004949 Crct1Q6PAI5 102 aa6.66□□□□□ -1.34
Traf6-201ENSMUST00000004949 Gm17416Q30KP4 66 aa6.58□□□□□ -1.36
Traf6-201ENSMUST00000004949 B930094E09RikQ8C4T2 136 aa6.58□□□□□ -1.36
Traf6-201ENSMUST00000004949 Dnah14A0A140LIJ4 4489 aa6.57□□□□□ -1.36
Traf6-201ENSMUST00000004949 Tnp1P10856 55 aa6.54□□□□□ -1.36
Traf6-201ENSMUST00000004949 Gm11939A2A592 99 aa6.53□□□□□ -1.36
Traf6-201ENSMUST00000004949 2210017I01RikA0A0A6YVV1 95 aa6.5□□□□□ -1.37
Traf6-201ENSMUST00000004949 Ndufaf8A2AMZ4 74 aa6.46□□□□□ -1.37
Traf6-201ENSMUST00000004949 Huwe1Q7TMY8 4377 aaKnown RBP6.46□□□□□ -1.37
Traf6-201ENSMUST00000004949 BsnO88737 3942 aa6.42□□□□□ -1.38
Traf6-201ENSMUST00000004949 Hspg2Q05793 3707 aaKnown RBP6.38□□□□□ -1.39
Traf6-201ENSMUST00000004949 Krtap13-1Q8K198 168 aa6.36□□□□□ -1.39
Traf6-201ENSMUST00000004949 Xirp2Q4U4S6 3784 aa6.36□□□□□ -1.39
Traf6-201ENSMUST00000004949 Prm2P07978 107 aa6.34□□□□□ -1.39
Traf6-201ENSMUST00000004949 Csmd3Q80T79 3707 aa6.33□□□□□ -1.4
Traf6-201ENSMUST00000004949 Gm40193A0A1B0GT39 78 aa6.33□□□□□ -1.4
Traf6-201ENSMUST00000004949 Dnah10D3YYQ8 4591 aa6.28□□□□□ -1.4
Traf6-201ENSMUST00000004949 Krtap3-2Q9D638 99 aa6.21□□□□□ -1.42
Traf6-201ENSMUST00000004949 Krtap3-3Q9D7P0 99 aa6.21□□□□□ -1.42
Traf6-201ENSMUST00000004949 Gm17402F6Z0L5 76 aa6.15□□□□□ -1.42
Traf6-201ENSMUST00000004949 Gm19668J3QMD1 248 aa6.15□□□□□ -1.43
Traf6-201ENSMUST00000004949 Dnah5Q8VHE6 4621 aa6.14□□□□□ -1.43
Traf6-201ENSMUST00000004949 Gm18596A0A1W2P860 280 aa6.13□□□□□ -1.43
Traf6-201ENSMUST00000004949 Krtap3-1A2A591 98 aa6.12□□□□□ -1.43
Traf6-201ENSMUST00000004949 Gm9112A2AI92 75 aa6.08□□□□□ -1.44
Traf6-201ENSMUST00000004949 PlecQ9QXS1 4691 aaKnown RBP6.03□□□□□ -1.44
Traf6-201ENSMUST00000004949 Vps13dB1ART2 4390 aa6.02□□□□□ -1.45
Traf6-201ENSMUST00000004949 Dnah17Q69Z23 4481 aa6□□□□□ -1.45
Traf6-201ENSMUST00000004949 Stard9Q80TF6 4561 aa6□□□□□ -1.45
Traf6-201ENSMUST00000004949 LorP18165 486 aa5.97□□□□□ -1.45
Traf6-201ENSMUST00000004949 Dnah11E9Q7N9 4488 aa5.95□□□□□ -1.46
Traf6-201ENSMUST00000004949 Dnah7bL7N1Y0 4068 aa5.95□□□□□ -1.46
Traf6-201ENSMUST00000004949 TnxbO35452 4006 aa5.88□□□□□ -1.47
Traf6-201ENSMUST00000004949 Dnah9B1AR51 4484 aa5.86□□□□□ -1.47
Traf6-201ENSMUST00000004949 PrkdcP97313 4128 aa5.83□□□□□ -1.48
Traf6-201ENSMUST00000004949 Kmt2aP55200 3966 aa5.82□□□□□ -1.48
Traf6-201ENSMUST00000004949 Dync2h1Q45VK7 4306 aa5.81□□□□□ -1.48
Traf6-201ENSMUST00000004949 ApobE9Q414 4505 aa5.79□□□□□ -1.48
Traf6-201ENSMUST00000004949 Krtap1-5A2A590 122 aa5.78□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 73.4 ms