RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Pde6gP09174 87 aa4.82□□□□□ -1.64
Usp40-204ENSMUST00000187758 TgO08710 2766 aa4.82□□□□□ -1.64
Usp40-204ENSMUST00000187758 Prol1E9PYQ4 312 aa4.81□□□□□ -1.64
Usp40-204ENSMUST00000187758 Igkv8-26A0A075B5N5 123 aa4.81□□□□□ -1.64
Usp40-204ENSMUST00000187758 Sox16Q62247 57 aa4.81□□□□□ -1.64
Usp40-204ENSMUST00000187758 Bean1Q9EQG5 255 aa4.81□□□□□ -1.64
Usp40-204ENSMUST00000187758 Ifitm6A0A1B0GS75 124 aa4.8□□□□□ -1.64
Usp40-204ENSMUST00000187758 Ighv10-3A0A075B5T6 119 aa4.8□□□□□ -1.64
Usp40-204ENSMUST00000187758 Ighv10-1A0A0B4J1J6 119 aa4.8□□□□□ -1.64
Usp40-204ENSMUST00000187758 2310034G01RikA0A286YDL3 209 aa4.8□□□□□ -1.64
Usp40-204ENSMUST00000187758 Gm10308Q9CVR5 141 aa4.8□□□□□ -1.64
Usp40-204ENSMUST00000187758 Cd164Q9R0L9 197 aa4.8□□□□□ -1.64
Usp40-204ENSMUST00000187758 Igkv4-58A0A0G2JGI6 119 aa4.8□□□□□ -1.64
Usp40-204ENSMUST00000187758 Dmac1Q9CQ00 111 aa4.79□□□□□ -1.64
Usp40-204ENSMUST00000187758 P84750 121 aa4.79□□□□□ -1.64
Usp40-204ENSMUST00000187758 Gm10770F7D043 238 aa4.79□□□□□ -1.64
Usp40-204ENSMUST00000187758 Q9DAA7 145 aa4.79□□□□□ -1.64
Usp40-204ENSMUST00000187758 Ube2bP63147 152 aa4.78□□□□□ -1.64
Usp40-204ENSMUST00000187758 Cystm1Q8K353 104 aa4.78□□□□□ -1.64
Usp40-204ENSMUST00000187758 Zcchc13Q9D548 170 aa4.78□□□□□ -1.64
Usp40-204ENSMUST00000187758 Gm11011D3Z3L9 86 aa4.78□□□□□ -1.64
Usp40-204ENSMUST00000187758 P06320 134 aa4.78□□□□□ -1.64
Usp40-204ENSMUST00000187758 Spint4Q9D263 159 aa4.78□□□□□ -1.64
Usp40-204ENSMUST00000187758 Smim29Q8R043 75 aa4.77□□□□□ -1.65
Usp40-204ENSMUST00000187758 Igkv8-21A0A140T8P7 120 aa4.77□□□□□ -1.65
Usp40-204ENSMUST00000187758 Fras1Q80T14 4010 aa4.77□□□□□ -1.65
Usp40-204ENSMUST00000187758 Gm10065F6TJM2 114 aa4.77□□□□□ -1.65
Usp40-204ENSMUST00000187758 Sfta2E9PXB6 77 aa4.76□□□□□ -1.65
Usp40-204ENSMUST00000187758 Krtap10-4Q08EG8 221 aa4.76□□□□□ -1.65
Usp40-204ENSMUST00000187758 Ighv2-2A0A075B5P8 116 aa4.76□□□□□ -1.65
Usp40-204ENSMUST00000187758 Ighv2-5A0A0A6YY69 116 aa4.76□□□□□ -1.65
Usp40-204ENSMUST00000187758 Igkv1-122A0A140T8M9 119 aa4.76□□□□□ -1.65
Usp40-204ENSMUST00000187758 Gm10570F6VB42 170 aa4.76□□□□□ -1.65
Usp40-204ENSMUST00000187758 P01821 116 aa4.76□□□□□ -1.65
Usp40-204ENSMUST00000187758 Elof1P60003 83 aa4.76□□□□□ -1.65
Usp40-204ENSMUST00000187758 Gm28374F6SG70 93 aa4.76□□□□□ -1.65
Usp40-204ENSMUST00000187758 Fam19a3Q7TPG6 132 aa4.76□□□□□ -1.65
Usp40-204ENSMUST00000187758 Msrb1Q9JLC3 116 aa4.76□□□□□ -1.65
Usp40-204ENSMUST00000187758 Phf5aP83870 110 aaKnown RBP4.75□□□□□ -1.65
Usp40-204ENSMUST00000187758 Gm7276Q3TYW4 209 aa4.75□□□□□ -1.65
Usp40-204ENSMUST00000187758 1600014C23RikQ9DAX4 101 aa4.75□□□□□ -1.65
Usp40-204ENSMUST00000187758 Gm10320E9PW43 113 aa4.74□□□□□ -1.65
Usp40-204ENSMUST00000187758 Wfdc10Q3V2J9 124 aa4.74□□□□□ -1.65
Usp40-204ENSMUST00000187758 Dnah11E9Q7N9 4488 aa4.74□□□□□ -1.65
Usp40-204ENSMUST00000187758 Gm10401E9Q3K6 71 aa4.74□□□□□ -1.65
Usp40-204ENSMUST00000187758 Dnah9B1AR51 4484 aa4.74□□□□□ -1.65
Usp40-204ENSMUST00000187758 Igkv8-27A0A0G2JF28 120 aa4.73□□□□□ -1.65
Usp40-204ENSMUST00000187758 Igkv8-30A0A140T8M3 121 aa4.73□□□□□ -1.65
Usp40-204ENSMUST00000187758 Defb9Q8R2I6 67 aa4.73□□□□□ -1.65
Usp40-204ENSMUST00000187758 9230102O04RikA2ASX7 82 aa4.73□□□□□ -1.65
Usp40-204ENSMUST00000187758 9530003J23RikQ8BM26 151 aa4.73□□□□□ -1.65
Usp40-204ENSMUST00000187758 Krtap29-1A2A5X4 342 aa4.72□□□□□ -1.65
Usp40-204ENSMUST00000187758 Fam104aA2A6P4 185 aa4.72□□□□□ -1.65
Usp40-204ENSMUST00000187758 Prr15lQ8JZM2 100 aa4.72□□□□□ -1.65
Usp40-204ENSMUST00000187758 Defb37Q7TMD2 62 aa4.72□□□□□ -1.65
Usp40-204ENSMUST00000187758 Fam229bQ8CF36 80 aa4.72□□□□□ -1.65
Usp40-204ENSMUST00000187758 A0A286YE02 88 aa4.71□□□□□ -1.66
Usp40-204ENSMUST00000187758 Defb12Q8K4N3 78 aa4.71□□□□□ -1.66
Usp40-204ENSMUST00000187758 Ube2aQ9Z255 152 aa4.71□□□□□ -1.66
Usp40-204ENSMUST00000187758 A830005F24RikQ8BRT5 167 aa4.7□□□□□ -1.66
Usp40-204ENSMUST00000187758 Gm10197F6QEY5 67 aa4.7□□□□□ -1.66
Usp40-204ENSMUST00000187758 Adm2Q7TNK8 150 aa4.7□□□□□ -1.66
Usp40-204ENSMUST00000187758 Q8K1L6 76 aa4.7□□□□□ -1.66
Usp40-204ENSMUST00000187758 Gm17521F6QAC8 156 aa4.7□□□□□ -1.66
Usp40-204ENSMUST00000187758 Gpr15lA0A0B4J1N3 78 aa4.69□□□□□ -1.66
Usp40-204ENSMUST00000187758 Atox1O08997 68 aaKnown RBP4.69□□□□□ -1.66
Usp40-204ENSMUST00000187758 Wfdc3Q14AE4 130 aa4.69□□□□□ -1.66
Usp40-204ENSMUST00000187758 Igkv1-110A0A0B4J1I0 119 aa4.69□□□□□ -1.66
Usp40-204ENSMUST00000187758 Cdc42se1Q8BHL7 80 aa4.69□□□□□ -1.66
Usp40-204ENSMUST00000187758 Gm17689B3GLJ4 109 aa4.68□□□□□ -1.66
Usp40-204ENSMUST00000187758 Coa6Q8BGD8 79 aa4.68□□□□□ -1.66
Usp40-204ENSMUST00000187758 A930002H24RikQ8C8Y3 163 aa4.68□□□□□ -1.66
Usp40-204ENSMUST00000187758 Dnah7aE9Q0T8 4024 aa4.67□□□□□ -1.66
Usp40-204ENSMUST00000187758 6030445D17RikE9Q8F9 148 aa4.67□□□□□ -1.66
Usp40-204ENSMUST00000187758 AI606181Q8C7B9 129 aa4.67□□□□□ -1.66
Usp40-204ENSMUST00000187758 Gm10642Q3TWM1 71 aa4.66□□□□□ -1.66
Usp40-204ENSMUST00000187758 A330070K13RikQ8CA53 115 aa4.66□□□□□ -1.66
Usp40-204ENSMUST00000187758 NbdyA0A0N4SUI7 68 aa4.66□□□□□ -1.66
Usp40-204ENSMUST00000187758 Vpreb3D3Z6J4 130 aa4.66□□□□□ -1.66
Usp40-204ENSMUST00000187758 Krtap13O88375 197 aa4.66□□□□□ -1.66
Usp40-204ENSMUST00000187758 Igkv3-5A0A140T8M6 119 aa4.65□□□□□ -1.66
Usp40-204ENSMUST00000187758 Gm2696A0A1W2P709 240 aa4.65□□□□□ -1.66
Usp40-204ENSMUST00000187758 Gm27235Q3UW50 83 aa4.65□□□□□ -1.66
Usp40-204ENSMUST00000187758 Wfdc13Q5DQQ6 81 aa4.65□□□□□ -1.66
Usp40-204ENSMUST00000187758 Krtap10-10A0A1W2P7T6 217 aa4.64□□□□□ -1.67
Usp40-204ENSMUST00000187758 Vps13dB1ART2 4390 aa4.64□□□□□ -1.67
Usp40-204ENSMUST00000187758 Dnah7cA0A087WR13 4024 aa4.63□□□□□ -1.67
Usp40-204ENSMUST00000187758 Sprr2jO70561 109 aa4.63□□□□□ -1.67
Usp40-204ENSMUST00000187758 HrnrQ8VHD8 2496 aa4.63□□□□□ -1.67
Usp40-204ENSMUST00000187758 Ccdc179J3QM76 67 aa4.63□□□□□ -1.67
Usp40-204ENSMUST00000187758 Igkv3-7A0A0G2JE31 119 aa4.62□□□□□ -1.67
Usp40-204ENSMUST00000187758 Gm10139O88245 57 aa4.62□□□□□ -1.67
Usp40-204ENSMUST00000187758 Igkv3-10A0A0G2JGN0 119 aa4.62□□□□□ -1.67
Usp40-204ENSMUST00000187758 Cox6a2P43023 97 aa4.61□□□□□ -1.67
Usp40-204ENSMUST00000187758 Q8BT88 171 aa4.61□□□□□ -1.67
Usp40-204ENSMUST00000187758 Gm12353A2AGJ4 60 aa4.6□□□□□ -1.67
Usp40-204ENSMUST00000187758 Dnah2P0C6F1 4456 aa4.6□□□□□ -1.67
Usp40-204ENSMUST00000187758 Znf706Q9D115 76 aaKnown RBP4.6□□□□□ -1.67
Usp40-204ENSMUST00000187758 Krtap14O08640 167 aa4.59□□□□□ -1.67
Usp40-204ENSMUST00000187758 Tnp2P11378 117 aa4.59□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 120.5 ms