RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Pde6gP09174 87 aa8.66□□□□□ -1.02
Rnf4-204ENSMUST00000182047 Pou2af1Q64693 256 aa8.66□□□□□ -1.02
Rnf4-204ENSMUST00000182047 BaalcQ8VHV1 145 aa8.66□□□□□ -1.02
Rnf4-204ENSMUST00000182047 Vpreb2P13373 142 aa8.65□□□□□ -1.02
Rnf4-204ENSMUST00000182047 Defb12Q8K4N3 78 aa8.65□□□□□ -1.03
Rnf4-204ENSMUST00000182047 P06320 134 aa8.64□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Pet100P0DJE0 76 aa8.64□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Sprr1aQ62266 144 aa8.64□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Ndufc1Q9CQY9 76 aa8.64□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Fam168bQ80XQ8 194 aa8.64□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Igkv3-12A0A140T8P0 119 aa8.63□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Spink8Q09TK9 105 aa8.63□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Defb11Q8R2I7 77 aa8.63□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Vpreb1P13372 142 aa8.62□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Gm9918Q8BUR5 174 aa8.62□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Ighv2-2A0A075B5P8 116 aa8.6□□□□□ -1.03
Rnf4-204ENSMUST00000182047 P01821 116 aa8.6□□□□□ -1.03
Rnf4-204ENSMUST00000182047 C130032M10RikQ8C888 123 aa8.6□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Defa28D3Z1V9 94 aa8.59□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Serp1Q9Z1W5 66 aa8.59□□□□□ -1.03
Rnf4-204ENSMUST00000182047 Gm10570F6VB42 170 aa8.58□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Sprr2jO70561 109 aa8.58□□□□□ -1.04
Rnf4-204ENSMUST00000182047 A530084C06RikQ3UTW2 186 aa8.58□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Gm11627A6PWP4 55 aa8.57□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Cox6a2P43023 97 aa8.57□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Dnah7aE9Q0T8 4024 aa8.56□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Gm44790A0A0N4SV91 103 aa8.56□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Q8BT88 171 aa8.56□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Dph3Q8K0W9 82 aa8.56□□□□□ -1.04
Rnf4-204ENSMUST00000182047 H2al1aQ5M8Q2 105 aa8.56□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Gm37389A0A0A6YW05 95 aa8.55□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Gm10837Q3UTT8 145 aa8.55□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Mrpl55Q9CZ83 127 aa8.55□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Gm17521F6QAC8 156 aa8.54□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Wfdc6bF6ULY1 148 aa8.54□□□□□ -1.04
Rnf4-204ENSMUST00000182047 PscaP57096 123 aa8.54□□□□□ -1.04
Rnf4-204ENSMUST00000182047 P84750 121 aa8.54□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Gm10401E9Q3K6 71 aa8.54□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Nupr2Q497P3 102 aa8.53□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Mrpl34Q99N91 92 aa8.53□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Plac8Q9JI48 112 aa8.53□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Obox2E9PXV9 151 aa8.53□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Gm7276Q3TYW4 209 aa8.53□□□□□ -1.04
Rnf4-204ENSMUST00000182047 Wfdc13Q5DQQ6 81 aa8.52□□□□□ -1.05
Rnf4-204ENSMUST00000182047 Ube2bP63147 152 aa8.52□□□□□ -1.05
Rnf4-204ENSMUST00000182047 Dnah5Q8VHE6 4621 aa8.5□□□□□ -1.05
Rnf4-204ENSMUST00000182047 1700018G05RikA0A1B0GSI2 66 aa8.5□□□□□ -1.05
Rnf4-204ENSMUST00000182047 Dmac1Q9CQ00 111 aa8.49□□□□□ -1.05
Rnf4-204ENSMUST00000182047 SycnQ8VCK7 134 aa8.49□□□□□ -1.05
Rnf4-204ENSMUST00000182047 Igkv8-19A0A0G2JFN8 121 aa8.48□□□□□ -1.05
Rnf4-204ENSMUST00000182047 UqcrqQ9CQ69 82 aa8.48□□□□□ -1.05
Rnf4-204ENSMUST00000182047 Vpreb3D3Z6J4 130 aa8.48□□□□□ -1.05
Rnf4-204ENSMUST00000182047 Prol1E9PYQ4 312 aa8.47□□□□□ -1.05
Rnf4-204ENSMUST00000182047 2310050C09RikG5E8Z3 280 aa8.47□□□□□ -1.05
Rnf4-204ENSMUST00000182047 Ly6g6cQ9Z1Q4 126 aa8.47□□□□□ -1.05
Rnf4-204ENSMUST00000182047 Dnah7cA0A087WR13 4024 aa8.45□□□□□ -1.06
Rnf4-204ENSMUST00000182047 Igkv3-4A0A140T8Q4 119 aa8.45□□□□□ -1.06
Rnf4-204ENSMUST00000182047 Gm10337F7DEP7 55 aa8.45□□□□□ -1.06
Rnf4-204ENSMUST00000182047 Krtap10-4Q08EG8 221 aa8.43□□□□□ -1.06
Rnf4-204ENSMUST00000182047 Reg3aO09037 175 aa8.42□□□□□ -1.06
Rnf4-204ENSMUST00000182047 1700012A03RikQ9DAF1 130 aa8.42□□□□□ -1.06
Rnf4-204ENSMUST00000182047 Coa6Q8BGD8 79 aa8.42□□□□□ -1.06
Rnf4-204ENSMUST00000182047 A930002H24RikQ8C8Y3 163 aa8.42□□□□□ -1.06
Rnf4-204ENSMUST00000182047 Gm21886J3QJU9 214 aa8.41□□□□□ -1.06
Rnf4-204ENSMUST00000182047 Gm10197F6QEY5 67 aa8.4□□□□□ -1.06
Rnf4-204ENSMUST00000182047 U90926O08546 118 aa8.4□□□□□ -1.06
Rnf4-204ENSMUST00000182047 Phf5aP83870 110 aaKnown RBP8.4□□□□□ -1.06
Rnf4-204ENSMUST00000182047 Zcchc13Q9D548 170 aa8.4□□□□□ -1.06
Rnf4-204ENSMUST00000182047 Rpl37aP61514 92 aa8.38□□□□□ -1.07
Rnf4-204ENSMUST00000182047 Vps13dB1ART2 4390 aa8.36□□□□□ -1.07
Rnf4-204ENSMUST00000182047 Fam104aA2A6P4 185 aa8.36□□□□□ -1.07
Rnf4-204ENSMUST00000182047 Defb9Q8R2I6 67 aa8.35□□□□□ -1.07
Rnf4-204ENSMUST00000182047 Spint4Q9D263 159 aa8.34□□□□□ -1.07
Rnf4-204ENSMUST00000182047 1700074P13RikQ9D9G7 251 aa8.33□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Gm28230A0A0A0MQ91 144 aa8.33□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Coa5Q99M07 74 aa8.32□□□□□ -1.08
Rnf4-204ENSMUST00000182047 A0A286YE49 62 aa8.3□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Cdc42se1Q8BHL7 80 aa8.3□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Igkv3-7A0A0G2JE31 119 aa8.3□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Atox1O08997 68 aaKnown RBP8.3□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Bean1Q9EQG5 255 aa8.3□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Igkv3-10A0A0G2JGN0 119 aa8.3□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Gm12353A2AGJ4 60 aa8.3□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Gm28374F6SG70 93 aa8.29□□□□□ -1.08
Rnf4-204ENSMUST00000182047 H2al1bA0A087WP11 105 aa8.29□□□□□ -1.08
Rnf4-204ENSMUST00000182047 H2al1kJ3QP08 105 aa8.29□□□□□ -1.08
Rnf4-204ENSMUST00000182047 H2al1eQ810S6 105 aa8.29□□□□□ -1.08
Rnf4-204ENSMUST00000182047 H2al1mQ9DAD9 105 aa8.29□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Gm10065F6TJM2 114 aa8.28□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Odf3bQ5M8M2 238 aa8.28□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Ube2aQ9Z255 152 aa8.28□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Gm10267M0QWD8 85 aa8.28□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Defb38Q7TNV7 63 aa8.28□□□□□ -1.08
Rnf4-204ENSMUST00000182047 AI606181Q8C7B9 129 aa8.28□□□□□ -1.08
Rnf4-204ENSMUST00000182047 Stard9Q80TF6 4561 aa8.28□□□□□ -1.08
Rnf4-204ENSMUST00000182047 6030445D17RikE9Q8F9 148 aa8.27□□□□□ -1.09
Rnf4-204ENSMUST00000182047 Krtap29-1A2A5X4 342 aa8.27□□□□□ -1.09
Rnf4-204ENSMUST00000182047 Wfdc10Q3V2J9 124 aa8.27□□□□□ -1.09
Rnf4-204ENSMUST00000182047 1600014C23RikQ9DAX4 101 aa8.27□□□□□ -1.09
Rnf4-204ENSMUST00000182047 Gm37013Q8K491 104 aa8.25□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms