RNA–Protein interactions for RNA: ENSMUST00000103037.4

Ush1g-201, Transcript of Usher syndrome type-1G protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush1g, Length 3,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1g-201ENSMUST00000103037 Chtf8P0CG14 533 aa9.27□□□□□ -0.93
Ush1g-201ENSMUST00000103037 Reg3bP35230 175 aa9.26□□□□□ -0.93
Ush1g-201ENSMUST00000103037 Ccl21aP84444 133 aa9.26□□□□□ -0.93
Ush1g-201ENSMUST00000103037 Gm20661K7N787 53 aa9.25□□□□□ -0.93
Ush1g-201ENSMUST00000103037 Snhg11Q4G0K9 87 aa9.24□□□□□ -0.93
Ush1g-201ENSMUST00000103037 Zcchc13Q9D548 170 aa9.24□□□□□ -0.93
Ush1g-201ENSMUST00000103037 Xirp2Q4U4S6 3784 aa9.23□□□□□ -0.93
Ush1g-201ENSMUST00000103037 Ccl21bP86792 133 aa9.22□□□□□ -0.93
Ush1g-201ENSMUST00000103037 Ccl21cP86793 133 aa9.22□□□□□ -0.93
Ush1g-201ENSMUST00000103037 P84750 121 aa9.22□□□□□ -0.93
Ush1g-201ENSMUST00000103037 Rpl37aP61514 92 aa9.21□□□□□ -0.93
Ush1g-201ENSMUST00000103037 Gm10267M0QWD8 85 aa9.21□□□□□ -0.93
Ush1g-201ENSMUST00000103037 Prm2P07978 107 aa9.2□□□□□ -0.94
Ush1g-201ENSMUST00000103037 Spata3Q9D9T6 193 aa9.2□□□□□ -0.94
Ush1g-201ENSMUST00000103037 Plac8Q9JI48 112 aa9.19□□□□□ -0.94
Ush1g-201ENSMUST00000103037 Fam168bQ80XQ8 194 aa9.19□□□□□ -0.94
Ush1g-201ENSMUST00000103037 Q8BGJ3 129 aa9.17□□□□□ -0.94
Ush1g-201ENSMUST00000103037 Zfp462B1AWL2 2495 aaKnown RBP9.17□□□□□ -0.94
Ush1g-201ENSMUST00000103037 Gm28230A0A0A0MQ91 144 aa9.15□□□□□ -0.94
Ush1g-201ENSMUST00000103037 Defb38Q7TNV7 63 aa9.15□□□□□ -0.95
Ush1g-201ENSMUST00000103037 FlnaQ8BTM8 2647 aaKnown RBP9.14□□□□□ -0.95
Ush1g-201ENSMUST00000103037 Usp9yF8VPU6 2556 aa9.13□□□□□ -0.95
Ush1g-201ENSMUST00000103037 Pdzd2E9Q1M1 2796 aa9.12□□□□□ -0.95
Ush1g-201ENSMUST00000103037 CubnQ9JLB4 3623 aa9.12□□□□□ -0.95
Ush1g-201ENSMUST00000103037 Limd2Q8BGB5 128 aa9.11□□□□□ -0.95
Ush1g-201ENSMUST00000103037 Gm11627A6PWP4 55 aa9.11□□□□□ -0.95
Ush1g-201ENSMUST00000103037 Prol1E9PYQ4 312 aa9.1□□□□□ -0.95
Ush1g-201ENSMUST00000103037 Epg5Q80TA9 2572 aa9.09□□□□□ -0.95
Ush1g-201ENSMUST00000103037 Igkv3-5A0A140T8M6 119 aa9.09□□□□□ -0.95
Ush1g-201ENSMUST00000103037 Tenm3Q9WTS6 2715 aa9.09□□□□□ -0.95
Ush1g-201ENSMUST00000103037 Krtap24-1G3X9A2 248 aa9.08□□□□□ -0.96
Ush1g-201ENSMUST00000103037 PtprqP0C5E4 2300 aa9.07□□□□□ -0.96
Ush1g-201ENSMUST00000103037 Tex15F8VPN2 2785 aa9.05□□□□□ -0.96
Ush1g-201ENSMUST00000103037 ApcQ61315 2845 aa9.05□□□□□ -0.96
Ush1g-201ENSMUST00000103037 HrnrQ8VHD8 2496 aa9.05□□□□□ -0.96
Ush1g-201ENSMUST00000103037 Muc2Q80Z19 2680 aa9.05□□□□□ -0.96
Ush1g-201ENSMUST00000103037 6030445D17RikE9Q8F9 148 aa9.03□□□□□ -0.96
Ush1g-201ENSMUST00000103037 Odf3bQ5M8M2 238 aa9.03□□□□□ -0.96
Ush1g-201ENSMUST00000103037 Myo18bE9PV66 2605 aa9.01□□□□□ -0.97
Ush1g-201ENSMUST00000103037 Gm2310J3QNJ2 377 aa9□□□□□ -0.97
Ush1g-201ENSMUST00000103037 BsnO88737 3942 aa9□□□□□ -0.97
Ush1g-201ENSMUST00000103037 Tep1P97499 2629 aa9□□□□□ -0.97
Ush1g-201ENSMUST00000103037 Sprr1aQ62266 144 aa9□□□□□ -0.97
Ush1g-201ENSMUST00000103037 TrrapQ80YV3 2565 aaKnown RBP9□□□□□ -0.97
Ush1g-201ENSMUST00000103037 1700012A03RikQ9DAF1 130 aa8.99□□□□□ -0.97
Ush1g-201ENSMUST00000103037 Hspg2Q05793 3707 aaKnown RBP8.98□□□□□ -0.97
Ush1g-201ENSMUST00000103037 TgO08710 2766 aa8.98□□□□□ -0.97
Ush1g-201ENSMUST00000103037 Ankrd11E9Q4F7 2643 aa8.97□□□□□ -0.97
Ush1g-201ENSMUST00000103037 AplnQ9R0R4 77 aa8.94□□□□□ -0.98
Ush1g-201ENSMUST00000103037 Notch2O35516 2470 aa8.94□□□□□ -0.98
Ush1g-201ENSMUST00000103037 Romo1P60603 79 aa8.93□□□□□ -0.98
Ush1g-201ENSMUST00000103037 Uqcr11Q9CPX8 56 aa8.93□□□□□ -0.98
Ush1g-201ENSMUST00000103037 PolqQ8CGS6 2544 aa8.93□□□□□ -0.98
Ush1g-201ENSMUST00000103037 Defb2P82020 71 aa8.93□□□□□ -0.98
Ush1g-201ENSMUST00000103037 Gm10139O88245 57 aa8.9□□□□□ -0.98
Ush1g-201ENSMUST00000103037 Gm3250E9Q1M3 230 aa8.9□□□□□ -0.99
Ush1g-201ENSMUST00000103037 Hectd1Q69ZR2 2618 aaKnown RBP8.87□□□□□ -0.99
Ush1g-201ENSMUST00000103037 Nbeal2Q6ZQA0 2742 aa8.85□□□□□ -0.99
Ush1g-201ENSMUST00000103037 Pla2g10Q9QXX3 151 aa8.85□□□□□ -0.99
Ush1g-201ENSMUST00000103037 Wfdc10Q3V2J9 124 aa8.84□□□□□ -0.99
Ush1g-201ENSMUST00000103037 Unc79Q0KK59 2596 aa8.84□□□□□ -0.99
Ush1g-201ENSMUST00000103037 Gm3233E9Q2H5 230 aa8.82□□□□□ -1
Ush1g-201ENSMUST00000103037 Ank2Q8C8R3 3898 aa8.82□□□□□ -1
Ush1g-201ENSMUST00000103037 SycnQ8VCK7 134 aa8.81□□□□□ -1
Ush1g-201ENSMUST00000103037 Notch1Q01705 2531 aa8.8□□□□□ -1
Ush1g-201ENSMUST00000103037 Gm21798J3QNU5 87 aa8.79□□□□□ -1
Ush1g-201ENSMUST00000103037 Csmd3Q80T79 3707 aa8.78□□□□□ -1
Ush1g-201ENSMUST00000103037 Defb9Q8R2I6 67 aa8.76□□□□□ -1.01
Ush1g-201ENSMUST00000103037 Gm4707V9GXN5 68 aa8.75□□□□□ -1.01
Ush1g-201ENSMUST00000103037 Usp24B1AY13 2617 aaKnown RBP8.74□□□□□ -1.01
Ush1g-201ENSMUST00000103037 Sslp1Q3UN54 99 aa8.7□□□□□ -1.02
Ush1g-201ENSMUST00000103037 AtrQ9JKK8 2635 aa8.69□□□□□ -1.02
Ush1g-201ENSMUST00000103037 Tenm2Q9WTS5 2764 aa8.69□□□□□ -1.02
Ush1g-201ENSMUST00000103037 Srrm2Q8BTI8 2703 aaKnown RBP8.67□□□□□ -1.02
Ush1g-201ENSMUST00000103037 Fbn1Q61554 2873 aaKnown RBP8.67□□□□□ -1.02
Ush1g-201ENSMUST00000103037 Defb13Q8R2I4 64 aa8.65□□□□□ -1.02
Ush1g-201ENSMUST00000103037 Nsd1O88491 2588 aaKnown RBP8.64□□□□□ -1.03
Ush1g-201ENSMUST00000103037 Col6a5A6H584 2640 aa8.64□□□□□ -1.03
Ush1g-201ENSMUST00000103037 Gm21887J3QQ04 176 aa8.64□□□□□ -1.03
Ush1g-201ENSMUST00000103037 Gm27235Q3UW50 83 aa8.63□□□□□ -1.03
Ush1g-201ENSMUST00000103037 Q8K1L6 76 aa8.62□□□□□ -1.03
Ush1g-201ENSMUST00000103037 Tenm1Q9WTS4 2731 aa8.6□□□□□ -1.03
Ush1g-201ENSMUST00000103037 CicQ924A2 2510 aa8.6□□□□□ -1.03
Ush1g-201ENSMUST00000103037 FlnbQ80X90 2602 aaKnown RBP8.6□□□□□ -1.03
Ush1g-201ENSMUST00000103037 Gm10642Q3TWM1 71 aa8.59□□□□□ -1.03
Ush1g-201ENSMUST00000103037 FasnP19096 2504 aaKnown RBP8.58□□□□□ -1.04
Ush1g-201ENSMUST00000103037 Gm7138L7N2C3 230 aa8.57□□□□□ -1.04
Ush1g-201ENSMUST00000103037 Gm3238W4VSP7 230 aa8.57□□□□□ -1.04
Ush1g-201ENSMUST00000103037 Col7a1Q63870 2944 aa8.55□□□□□ -1.04
Ush1g-201ENSMUST00000103037 Gm10999F6Q4M4 69 aa8.55□□□□□ -1.04
Ush1g-201ENSMUST00000103037 Kmt2bO08550 2713 aa8.55□□□□□ -1.04
Ush1g-201ENSMUST00000103037 VwfQ8CIZ8 2813 aa8.52□□□□□ -1.05
Ush1g-201ENSMUST00000103037 Megf8P60882 2789 aa8.51□□□□□ -1.05
Ush1g-201ENSMUST00000103037 AW011738F6S7Q2 159 aa8.5□□□□□ -1.05
Ush1g-201ENSMUST00000103037 Itpr2Q9Z329 2701 aa8.5□□□□□ -1.05
Ush1g-201ENSMUST00000103037 Gm16253D3Z167 63 aa8.5□□□□□ -1.05
Ush1g-201ENSMUST00000103037 Defb1P56386 69 aa8.5□□□□□ -1.05
Ush1g-201ENSMUST00000103037 Anapc11Q9CPX9 84 aa8.49□□□□□ -1.05
Ush1g-201ENSMUST00000103037 Mast4Q811L6 2618 aa8.47□□□□□ -1.05
Ush1g-201ENSMUST00000103037 Ndufaf8A2AMZ4 74 aa8.46□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 146.7 ms