RNA–Protein interactions for RNA: ENSMUST00000084885.11

Ubp1-202, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 5 BASIC

Gene Ubp1, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-202ENSMUST00000084885 Wfdc3Q14AE4 130 aa10.65□□□□□ -0.7
Ubp1-202ENSMUST00000084885 Gm10337F7DEP7 55 aa10.65□□□□□ -0.7
Ubp1-202ENSMUST00000084885 AY074887Q8R5F9 132 aa10.64□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Gm5617Q91VN2 117 aa10.64□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Wfdc6bF6ULY1 148 aa10.64□□□□□ -0.71
Ubp1-202ENSMUST00000084885 BsnO88737 3942 aa10.64□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Gm11213A0A1B0GR83 88 aa10.63□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Igkv8-27A0A0G2JF28 120 aa10.62□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Igkv8-30A0A140T8M3 121 aa10.62□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Defb39Q70KL3 74 aa10.61□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Gm10570F6VB42 170 aa10.61□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Igkv3-7A0A0G2JE31 119 aa10.6□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Igkv3-4A0A140T8Q4 119 aa10.6□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Gm11627A6PWP4 55 aa10.6□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Psors1c2Q80ZC9 134 aa10.59□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Rps28P62858 69 aaKnown RBP10.59□□□□□ -0.71
Ubp1-202ENSMUST00000084885 Igkv8-21A0A140T8P7 120 aa10.58□□□□□ -0.72
Ubp1-202ENSMUST00000084885 Gm10267M0QWD8 85 aa10.58□□□□□ -0.72
Ubp1-202ENSMUST00000084885 Serp1Q9Z1W5 66 aa10.58□□□□□ -0.72
Ubp1-202ENSMUST00000084885 1700018G05RikA0A1B0GSI2 66 aa10.57□□□□□ -0.72
Ubp1-202ENSMUST00000084885 Gm10197F6QEY5 67 aa10.57□□□□□ -0.72
Ubp1-202ENSMUST00000084885 Vpreb3D3Z6J4 130 aa10.57□□□□□ -0.72
Ubp1-202ENSMUST00000084885 Pou2af1Q64693 256 aa10.56□□□□□ -0.72
Ubp1-202ENSMUST00000084885 RetnlbQ99P86 105 aa10.56□□□□□ -0.72
Ubp1-202ENSMUST00000084885 SptssbQ925E8 76 aa10.56□□□□□ -0.72
Ubp1-202ENSMUST00000084885 Anapc11Q9CPX9 84 aa10.55□□□□□ -0.72
Ubp1-202ENSMUST00000084885 Dmac1Q9CQ00 111 aa10.55□□□□□ -0.72
Ubp1-202ENSMUST00000084885 Znf414Q9DCK4 299 aa10.54□□□□□ -0.72
Ubp1-202ENSMUST00000084885 Ndufs5Q99LY9 106 aa10.54□□□□□ -0.72
Ubp1-202ENSMUST00000084885 Gm9903Q8C9Y8 129 aa10.53□□□□□ -0.72
Ubp1-202ENSMUST00000084885 Hspg2Q05793 3707 aaKnown RBP10.52□□□□□ -0.73
Ubp1-202ENSMUST00000084885 Gm10770F7D043 238 aa10.52□□□□□ -0.73
Ubp1-202ENSMUST00000084885 Atox1O08997 68 aaKnown RBP10.52□□□□□ -0.73
Ubp1-202ENSMUST00000084885 Gm10320E9PW43 113 aa10.51□□□□□ -0.73
Ubp1-202ENSMUST00000084885 Defb9Q8R2I6 67 aa10.51□□□□□ -0.73
Ubp1-202ENSMUST00000084885 Spint4Q9D263 159 aa10.51□□□□□ -0.73
Ubp1-202ENSMUST00000084885 Elof1P60003 83 aa10.5□□□□□ -0.73
Ubp1-202ENSMUST00000084885 Ndufc1Q9CQY9 76 aa10.5□□□□□ -0.73
Ubp1-202ENSMUST00000084885 Krtap10-10A0A1W2P7T6 217 aa10.47□□□□□ -0.73
Ubp1-202ENSMUST00000084885 Igkv3-3A0A140T8Q0 119 aa10.47□□□□□ -0.73
Ubp1-202ENSMUST00000084885 P84750 121 aa10.46□□□□□ -0.73
Ubp1-202ENSMUST00000084885 Pde6gP09174 87 aa10.46□□□□□ -0.73
Ubp1-202ENSMUST00000084885 1700074P13RikQ9D9G7 251 aa10.46□□□□□ -0.73
Ubp1-202ENSMUST00000084885 Gm28230A0A0A0MQ91 144 aa10.46□□□□□ -0.74
Ubp1-202ENSMUST00000084885 Reg3aO09037 175 aa10.45□□□□□ -0.74
Ubp1-202ENSMUST00000084885 Gm44790A0A0N4SV91 103 aa10.45□□□□□ -0.74
Ubp1-202ENSMUST00000084885 Cox6a2P43023 97 aa10.44□□□□□ -0.74
Ubp1-202ENSMUST00000084885 H2al1aQ5M8Q2 105 aa10.44□□□□□ -0.74
Ubp1-202ENSMUST00000084885 H2al1bA0A087WP11 105 aa10.43□□□□□ -0.74
Ubp1-202ENSMUST00000084885 Gm12353A2AGJ4 60 aa10.43□□□□□ -0.74
Ubp1-202ENSMUST00000084885 Defb13Q8R2I4 64 aa10.42□□□□□ -0.74
Ubp1-202ENSMUST00000084885 Ighv2-2A0A075B5P8 116 aa10.42□□□□□ -0.74
Ubp1-202ENSMUST00000084885 Ighv2-5A0A0A6YY69 116 aa10.42□□□□□ -0.74
Ubp1-202ENSMUST00000084885 P01821 116 aa10.42□□□□□ -0.74
Ubp1-202ENSMUST00000084885 Sec61gP60060 68 aa10.42□□□□□ -0.74
Ubp1-202ENSMUST00000084885 Prol1E9PYQ4 312 aa10.41□□□□□ -0.74
Ubp1-202ENSMUST00000084885 A330070K13RikQ8CA53 115 aa10.41□□□□□ -0.74
Ubp1-202ENSMUST00000084885 Ccdc179J3QM76 67 aa10.4□□□□□ -0.74
Ubp1-202ENSMUST00000084885 2310050C09RikG5E8Z3 280 aa10.39□□□□□ -0.75
Ubp1-202ENSMUST00000084885 Sprr2jO70561 109 aa10.39□□□□□ -0.75
Ubp1-202ENSMUST00000084885 Q8BT88 171 aa10.38□□□□□ -0.75
Ubp1-202ENSMUST00000084885 Spaca4Q80ZQ0 127 aa10.38□□□□□ -0.75
Ubp1-202ENSMUST00000084885 AI606181Q8C7B9 129 aa10.38□□□□□ -0.75
Ubp1-202ENSMUST00000084885 C130032M10RikQ8C888 123 aa10.38□□□□□ -0.75
Ubp1-202ENSMUST00000084885 CnbpP53996 178 aaKnown RBP10.37□□□□□ -0.75
Ubp1-202ENSMUST00000084885 UqcrqQ9CQ69 82 aa10.37□□□□□ -0.75
Ubp1-202ENSMUST00000084885 Gm21886J3QJU9 214 aa10.37□□□□□ -0.75
Ubp1-202ENSMUST00000084885 Coa6Q8BGD8 79 aa10.36□□□□□ -0.75
Ubp1-202ENSMUST00000084885 Q8K1L6 76 aa10.36□□□□□ -0.75
Ubp1-202ENSMUST00000084885 2310061N02RikQ9D6S9 174 aa10.35□□□□□ -0.75
Ubp1-202ENSMUST00000084885 Bean1Q9EQG5 255 aa10.34□□□□□ -0.75
Ubp1-202ENSMUST00000084885 Mrpl34Q99N91 92 aa10.34□□□□□ -0.75
Ubp1-202ENSMUST00000084885 Igkv8-28A0A0G2JE47 121 aa10.33□□□□□ -0.75
Ubp1-202ENSMUST00000084885 Rpl37aP61514 92 aa10.33□□□□□ -0.76
Ubp1-202ENSMUST00000084885 Gm10308Q9CVR5 141 aa10.33□□□□□ -0.76
Ubp1-202ENSMUST00000084885 Krtap13O88375 197 aa10.32□□□□□ -0.76
Ubp1-202ENSMUST00000084885 A0A286YE49 62 aa10.32□□□□□ -0.76
Ubp1-202ENSMUST00000084885 OxtP35454 125 aa10.3□□□□□ -0.76
Ubp1-202ENSMUST00000084885 Gpr15lA0A0B4J1N3 78 aa10.3□□□□□ -0.76
Ubp1-202ENSMUST00000084885 Gm2696A0A1W2P709 240 aa10.28□□□□□ -0.76
Ubp1-202ENSMUST00000084885 AW011738F6S7Q2 159 aa10.28□□□□□ -0.76
Ubp1-202ENSMUST00000084885 H2al1eQ810S6 105 aa10.28□□□□□ -0.76
Ubp1-202ENSMUST00000084885 Znf706Q9D115 76 aaKnown RBP10.27□□□□□ -0.77
Ubp1-202ENSMUST00000084885 Gm27235Q3UW50 83 aa10.23□□□□□ -0.77
Ubp1-202ENSMUST00000084885 Sprr1aQ62266 144 aa10.23□□□□□ -0.77
Ubp1-202ENSMUST00000084885 Zcchc13Q9D548 170 aa10.21□□□□□ -0.78
Ubp1-202ENSMUST00000084885 H2al1kJ3QP08 105 aa10.21□□□□□ -0.78
Ubp1-202ENSMUST00000084885 H2al1mQ9DAD9 105 aa10.21□□□□□ -0.78
Ubp1-202ENSMUST00000084885 A930002H24RikQ8C8Y3 163 aa10.2□□□□□ -0.78
Ubp1-202ENSMUST00000084885 Igkv8-19A0A0G2JFN8 121 aa10.19□□□□□ -0.78
Ubp1-202ENSMUST00000084885 Coa5Q99M07 74 aa10.15□□□□□ -0.79
Ubp1-202ENSMUST00000084885 Gm7276Q3TYW4 209 aa10.14□□□□□ -0.79
Ubp1-202ENSMUST00000084885 6030445D17RikE9Q8F9 148 aa10.14□□□□□ -0.79
Ubp1-202ENSMUST00000084885 Fam104aA2A6P4 185 aa10.13□□□□□ -0.79
Ubp1-202ENSMUST00000084885 Dnah10D3YYQ8 4591 aa10.09□□□□□ -0.79
Ubp1-202ENSMUST00000084885 Cdc42se1Q8BHL7 80 aa10.08□□□□□ -0.8
Ubp1-202ENSMUST00000084885 Gm10065F6TJM2 114 aa10.08□□□□□ -0.8
Ubp1-202ENSMUST00000084885 Sox16Q62247 57 aa10.05□□□□□ -0.8
Ubp1-202ENSMUST00000084885 Chchd10Q7TNL9 138 aa10.05□□□□□ -0.8
Ubp1-202ENSMUST00000084885 A730071L15RikQ8C4X0 137 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms