RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Hist1h2bfP10853 126 aa3.93□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Hist1h2bbQ64475 126 aa3.93□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Gm9747Q810H1 104 aa3.93□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Limd2Q8BGB5 128 aa3.93□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Hist1h2bpQ8CGP2 126 aaKnown RBP3.93□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 RetnlbQ99P86 105 aa3.93□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Trav12d-3A0A075B6A4 115 aa3.92□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Igkv1-88A0A140T8N1 120 aa3.92□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Tfpi2O35536 230 aa3.92□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 SpinklQ8CEK3 90 aa3.92□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 4930519P11RikQ9CUJ8 166 aa3.92□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Gm9112A2AI92 75 aa3.91□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 4930546C10RikE9Q4Y3 121 aa3.91□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Ighv1-72P01751 139 aa3.91□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 P01843 105 aa3.91□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Trav3-1Q5R1I8 114 aa3.91□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Ifitm10Q8BR26 201 aa3.91□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Ube2wQ8VDW4 151 aa3.91□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Pkhd1E9PZ36 4059 aa3.9□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 9130213A22RikQ3V3T2 120 aa3.9□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Sprr1bQ62267 153 aa3.9□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Dnah8Q91XQ0 4731 aa3.89□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Igkv3-2A0A075B5P0 119 aa3.89□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Trdv2-1A0A0G2JGB9 116 aa3.89□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Gm10065F6TJM2 114 aa3.89□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Ube2d1P61080 147 aaKnown RBP3.89□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Krtap1-4Q3V2D6 188 aa3.89□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Leprotl1Q9CQ74 131 aa3.89□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Lyrm7Q9DA03 104 aa3.89□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Higd1aQ9JLR9 95 aa3.89□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Kmt2cQ8BRH4 4903 aa3.88□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Gm21834J3QN05 151 aa3.88□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Rab37Q9JKM7 223 aa3.88□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Gpr15lA0A0B4J1N3 78 aa3.87□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Gm26727M0QWT1 121 aa3.87□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Defa10P50708 93 aa3.87□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Sprr1aQ62266 144 aa3.87□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Fam19a2Q7TPG7 131 aa3.87□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 OtorQ9JIE3 128 aa3.87□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Sec11aQ9R0P6 179 aa3.87□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Birc6O88738 4882 aa3.87□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Defa3P28310 93 aa3.86□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Defa23Q5G866 93 aa3.86□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 SycnQ8VCK7 134 aa3.86□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Cox7b2Q9D2H1 82 aa3.86□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Zcchc13Q9D548 170 aa3.86□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Herc2Q4U2R1 4836 aa3.85□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Ighv1-56A0A0A6YXG2 117 aa3.85□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Igkv8-24A0A140T8P5 121 aa3.85□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 A730009L09RikA0A1B0GS82 72 aa3.85□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Gng4P50153 75 aa3.85□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Tnfsf18Q7TS55 173 aa3.85□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Sprr4Q8CGN8 76 aa3.85□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Hist1h2bkQ8CGP1 126 aaKnown RBP3.85□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Esp24A8R0V6 68 aa3.84□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 LeprotO89013 131 aa3.84□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Bsph1Q3UW26 133 aa3.84□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Gm1553Q66VB7 94 aa3.84□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Rbm7Q9CQT2 265 aaKnown RBP3.84□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Wdr38Q9D994 303 aa3.84□□□□□ -1.79
Ccdc54-201ENSMUST00000062439 Kiaa1109A2AAE1 5005 aa3.83□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Igkv2-137A0A0B4J1H6 120 aa3.83□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Igkv4-58A0A0G2JGI6 119 aa3.83□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 PlnP61014 52 aa3.83□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Tmem170bP86050 132 aa3.83□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 ApobE9Q414 4505 aa3.83□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Gm10130F6ZHM5 101 aa3.82□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Krtap19-5O08632 62 aa3.82□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Gm5148Q8BGG2 154 aa3.82□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Dph3Q8K0W9 82 aa3.82□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Ndufs5Q99LY9 106 aa3.82□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Gm11627A6PWP4 55 aa3.81□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Cypt15B1AXS0 87 aa3.81□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Defa27F2Z403 93 aa3.81□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Rpl37aP61514 92 aa3.81□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Msrb1Q9JLC3 116 aa3.81□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Ighv1-62-1A0A075B5U3 116 aa3.8□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Trav14-1A0A0G2JF94 121 aa3.8□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 A0A286YCN5 57 aa3.8□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Ndufaf8A2AMZ4 74 aa3.8□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 A930002H24RikQ8C8Y3 163 aa3.8□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Mpv17l2Q8VIK2 200 aa3.8□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Stard4Q99JV5 224 aa3.8□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Vps13bQ80TY5 3993 aa3.79□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Pkhd1l1Q80ZA4 4249 aa3.79□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Igkv3-3A0A140T8Q0 119 aa3.79□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Igf1P05017 153 aa3.79□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Defb9Q8R2I6 67 aa3.79□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Abca13Q5SSE9 5034 aa3.78□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Igkv8-28A0A0G2JE47 121 aa3.78□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Gm44790A0A0N4SV91 103 aa3.78□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 P01794 123 aa3.78□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Tmem258P61166 79 aa3.78□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Adm2Q7TNK8 150 aa3.78□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 A330070K13RikQ8CA53 115 aa3.78□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Chac1Q8R3J5 223 aa3.78□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Prelid3aQ8VE85 172 aa3.78□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Dnhd1D3Z2X2 4750 aa3.78□□□□□ -1.8
Ccdc54-201ENSMUST00000062439 Trav8-1A0A075B641 109 aa3.77□□□□□ -1.81
Ccdc54-201ENSMUST00000062439 NbdyA0A0N4SUI7 68 aa3.77□□□□□ -1.81
Retrieved 100 of 22,080 RNA–protein pairs in 82.6 ms