RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Gm9821Q8K076 103 aa5□□□□□ -1.61
Usp40-201ENSMUST00000040783 Cystm1Q8K353 104 aa5□□□□□ -1.61
Usp40-201ENSMUST00000040783 Gm27235Q3UW50 83 aa5□□□□□ -1.61
Usp40-201ENSMUST00000040783 Dmxl2Q8BPN8 3032 aa4.99□□□□□ -1.61
Usp40-201ENSMUST00000040783 Uqcr11Q9CPX8 56 aa4.99□□□□□ -1.61
Usp40-201ENSMUST00000040783 Gm5617Q91VN2 117 aa4.99□□□□□ -1.61
Usp40-201ENSMUST00000040783 Mrpl34Q99N91 92 aa4.99□□□□□ -1.61
Usp40-201ENSMUST00000040783 Gm21886J3QJU9 214 aa4.99□□□□□ -1.61
Usp40-201ENSMUST00000040783 Rpl37aP61514 92 aa4.99□□□□□ -1.61
Usp40-201ENSMUST00000040783 Gm44790A0A0N4SV91 103 aa4.99□□□□□ -1.61
Usp40-201ENSMUST00000040783 Lelp1Q9DAE3 120 aa4.98□□□□□ -1.61
Usp40-201ENSMUST00000040783 Sprr4Q8CGN8 76 aa4.97□□□□□ -1.61
Usp40-201ENSMUST00000040783 Krtap11-1E9Q2E9 183 aa4.97□□□□□ -1.61
Usp40-201ENSMUST00000040783 Spaca4Q80ZQ0 127 aa4.97□□□□□ -1.61
Usp40-201ENSMUST00000040783 Gm3646F6S692 53 aa4.96□□□□□ -1.61
Usp40-201ENSMUST00000040783 Zzef1Q5SSH7 2924 aa4.95□□□□□ -1.62
Usp40-201ENSMUST00000040783 Fam168bQ80XQ8 194 aa4.95□□□□□ -1.62
Usp40-201ENSMUST00000040783 Map1aQ9QYR6 2776 aa4.94□□□□□ -1.62
Usp40-201ENSMUST00000040783 Wdfy4E9Q2M9 3149 aa4.94□□□□□ -1.62
Usp40-201ENSMUST00000040783 Gm17606F6ZL36 78 aa4.94□□□□□ -1.62
Usp40-201ENSMUST00000040783 Usp24B1AY13 2617 aaKnown RBP4.94□□□□□ -1.62
Usp40-201ENSMUST00000040783 Fam229bQ8CF36 80 aa4.94□□□□□ -1.62
Usp40-201ENSMUST00000040783 Phxr5P08399 672 aa4.93□□□□□ -1.62
Usp40-201ENSMUST00000040783 Sprr1bQ62267 153 aa4.92□□□□□ -1.62
Usp40-201ENSMUST00000040783 Q8BT88 171 aa4.92□□□□□ -1.62
Usp40-201ENSMUST00000040783 Rnase13Q5GAM7 153 aa4.92□□□□□ -1.62
Usp40-201ENSMUST00000040783 Defb50Q6TU36 73 aa4.91□□□□□ -1.62
Usp40-201ENSMUST00000040783 4933415A04RikQ9D443 101 aa4.91□□□□□ -1.62
Usp40-201ENSMUST00000040783 Gm7138L7N2C3 230 aa4.9□□□□□ -1.62
Usp40-201ENSMUST00000040783 Gm3238W4VSP7 230 aa4.9□□□□□ -1.62
Usp40-201ENSMUST00000040783 Akap13E9Q394 2776 aa4.9□□□□□ -1.62
Usp40-201ENSMUST00000040783 Gcn1E9PVA8 2671 aaKnown RBP4.9□□□□□ -1.62
Usp40-201ENSMUST00000040783 Plac8Q9JI48 112 aa4.9□□□□□ -1.63
Usp40-201ENSMUST00000040783 AY074887Q8R5F9 132 aa4.89□□□□□ -1.63
Usp40-201ENSMUST00000040783 Cmya5Q70KF4 3739 aa4.89□□□□□ -1.63
Usp40-201ENSMUST00000040783 Muc4Q8JZM8 3443 aa4.89□□□□□ -1.63
Usp40-201ENSMUST00000040783 Gm9195A0A140LHT4 2805 aa4.89□□□□□ -1.63
Usp40-201ENSMUST00000040783 DspE9Q557 2883 aaKnown RBP4.89□□□□□ -1.63
Usp40-201ENSMUST00000040783 Defb9Q8R2I6 67 aa4.88□□□□□ -1.63
Usp40-201ENSMUST00000040783 Gm10999F6Q4M4 69 aa4.87□□□□□ -1.63
Usp40-201ENSMUST00000040783 Gm7137J3QMW1 236 aa4.87□□□□□ -1.63
Usp40-201ENSMUST00000040783 Csmd2V9GX34 3611 aa4.86□□□□□ -1.63
Usp40-201ENSMUST00000040783 Nsd1O88491 2588 aaKnown RBP4.86□□□□□ -1.63
Usp40-201ENSMUST00000040783 Stab1Q8R4Y4 2571 aa4.86□□□□□ -1.63
Usp40-201ENSMUST00000040783 Sec61bQ9CQS8 96 aaKnown RBP4.86□□□□□ -1.63
Usp40-201ENSMUST00000040783 4930507D05RikQ8C9C9 103 aa4.85□□□□□ -1.63
Usp40-201ENSMUST00000040783 A330070K13RikQ8CA53 115 aa4.85□□□□□ -1.63
Usp40-201ENSMUST00000040783 Smim29Q8R043 75 aa4.84□□□□□ -1.63
Usp40-201ENSMUST00000040783 Gm21887J3QQ04 176 aa4.84□□□□□ -1.64
Usp40-201ENSMUST00000040783 Gm7276Q3TYW4 209 aa4.83□□□□□ -1.64
Usp40-201ENSMUST00000040783 Fn1P11276 2477 aaKnown RBP4.83□□□□□ -1.64
Usp40-201ENSMUST00000040783 Zcchc13Q9D548 170 aa4.83□□□□□ -1.64
Usp40-201ENSMUST00000040783 Mast4Q811L6 2618 aa4.82□□□□□ -1.64
Usp40-201ENSMUST00000040783 Svep1A2AVA0 3567 aa4.82□□□□□ -1.64
Usp40-201ENSMUST00000040783 Notch1Q01705 2531 aa4.82□□□□□ -1.64
Usp40-201ENSMUST00000040783 Lama5Q61001 3718 aa4.81□□□□□ -1.64
Usp40-201ENSMUST00000040783 Chtf8P0CG14 533 aa4.81□□□□□ -1.64
Usp40-201ENSMUST00000040783 Fbn2Q61555 2907 aa4.8□□□□□ -1.64
Usp40-201ENSMUST00000040783 Igsf10Q3V1M1 2594 aa4.8□□□□□ -1.64
Usp40-201ENSMUST00000040783 Dmbt1Q60997 2085 aa4.8□□□□□ -1.64
Usp40-201ENSMUST00000040783 Fam104aA2A6P4 185 aa4.79□□□□□ -1.64
Usp40-201ENSMUST00000040783 Adgrg4B7ZCC9 3073 aa4.79□□□□□ -1.64
Usp40-201ENSMUST00000040783 Gm10065F6TJM2 114 aa4.79□□□□□ -1.64
Usp40-201ENSMUST00000040783 Gm17349F7BGH6 99 aa4.78□□□□□ -1.64
Usp40-201ENSMUST00000040783 Anapc11Q9CPX9 84 aa4.78□□□□□ -1.64
Usp40-201ENSMUST00000040783 CriptO70333 101 aa4.77□□□□□ -1.65
Usp40-201ENSMUST00000040783 Itpr3P70227 2670 aa4.77□□□□□ -1.65
Usp40-201ENSMUST00000040783 LystP97412 3788 aa4.76□□□□□ -1.65
Usp40-201ENSMUST00000040783 NbdyA0A0N4SUI7 68 aa4.76□□□□□ -1.65
Usp40-201ENSMUST00000040783 NipblQ6KCD5 2798 aaKnown RBP4.76□□□□□ -1.65
Usp40-201ENSMUST00000040783 Gm36176A0A1W2P8D5 158 aa4.76□□□□□ -1.65
Usp40-201ENSMUST00000040783 Defb1P56386 69 aa4.75□□□□□ -1.65
Usp40-201ENSMUST00000040783 Ash1lQ99MY8 2958 aa4.75□□□□□ -1.65
Usp40-201ENSMUST00000040783 Gm10320E9PW43 113 aa4.74□□□□□ -1.65
Usp40-201ENSMUST00000040783 Chd9Q8BYH8 2885 aa4.73□□□□□ -1.65
Usp40-201ENSMUST00000040783 LrbaQ9ESE1 2856 aa4.73□□□□□ -1.65
Usp40-201ENSMUST00000040783 Trank1Q8BV79 2999 aa4.72□□□□□ -1.65
Usp40-201ENSMUST00000040783 Gm3880A0A1B0GSB3 72 aa4.72□□□□□ -1.65
Usp40-201ENSMUST00000040783 Ubr5Q80TP3 2792 aa4.69□□□□□ -1.66
Usp40-201ENSMUST00000040783 NbeaQ9EPN1 2936 aa4.69□□□□□ -1.66
Usp40-201ENSMUST00000040783 Muc2Q80Z19 2680 aa4.69□□□□□ -1.66
Usp40-201ENSMUST00000040783 2310034C09RikQ9D746 214 aa4.69□□□□□ -1.66
Usp40-201ENSMUST00000040783 Chd6A3KFM7 2711 aa4.68□□□□□ -1.66
Usp40-201ENSMUST00000040783 Gm21798J3QNU5 87 aa4.67□□□□□ -1.66
Usp40-201ENSMUST00000040783 Ndufaf8A2AMZ4 74 aa4.64□□□□□ -1.67
Usp40-201ENSMUST00000040783 9530053A07RikE9PVG8 2581 aa4.64□□□□□ -1.67
Usp40-201ENSMUST00000040783 A730071L15RikQ8C4X0 137 aa4.64□□□□□ -1.67
Usp40-201ENSMUST00000040783 Prm2P07978 107 aa4.63□□□□□ -1.67
Usp40-201ENSMUST00000040783 Sprr1aQ62266 144 aa4.63□□□□□ -1.67
Usp40-201ENSMUST00000040783 Romo1P60603 79 aa4.62□□□□□ -1.67
Usp40-201ENSMUST00000040783 Nbeal2Q6ZQA0 2742 aa4.62□□□□□ -1.67
Usp40-201ENSMUST00000040783 Col6a5A6H584 2640 aa4.62□□□□□ -1.67
Usp40-201ENSMUST00000040783 Kmt2bO08550 2713 aa4.61□□□□□ -1.67
Usp40-201ENSMUST00000040783 Helz2E9QAM5 2947 aaKnown RBP4.61□□□□□ -1.67
Usp40-201ENSMUST00000040783 Tep1P97499 2629 aa4.61□□□□□ -1.67
Usp40-201ENSMUST00000040783 6030445D17RikE9Q8F9 148 aa4.61□□□□□ -1.67
Usp40-201ENSMUST00000040783 Pkd1l1Q8R526 2615 aa4.6□□□□□ -1.67
Usp40-201ENSMUST00000040783 Gm9112A2AI92 75 aa4.6□□□□□ -1.67
Usp40-201ENSMUST00000040783 Odf3bQ5M8M2 238 aa4.6□□□□□ -1.67
Usp40-201ENSMUST00000040783 Gm9508A0A1W2P7W0 230 aa4.58□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 86 ms