RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Ubr5Q80TP3 2792 aa11.85□□□□□ -0.51
Ebf3-201ENSMUST00000033378 Phxr5P08399 672 aa11.85□□□□□ -0.51
Ebf3-201ENSMUST00000033378 MgaA2AWL7 3003 aaKnown RBP11.85□□□□□ -0.51
Ebf3-201ENSMUST00000033378 Fam104aA2A6P4 185 aa11.84□□□□□ -0.51
Ebf3-201ENSMUST00000033378 Anapc11Q9CPX9 84 aa11.83□□□□□ -0.52
Ebf3-201ENSMUST00000033378 Spata3Q9D9T6 193 aa11.83□□□□□ -0.52
Ebf3-201ENSMUST00000033378 Cypt15B1AXS0 87 aa11.82□□□□□ -0.52
Ebf3-201ENSMUST00000033378 AspmQ8CJ27 3122 aa11.82□□□□□ -0.52
Ebf3-201ENSMUST00000033378 Unc80Q8BLN6 3261 aa11.79□□□□□ -0.52
Ebf3-201ENSMUST00000033378 Mast4Q811L6 2618 aa11.79□□□□□ -0.52
Ebf3-201ENSMUST00000033378 Defb11Q8R2I7 77 aa11.75□□□□□ -0.53
Ebf3-201ENSMUST00000033378 Zcchc13Q9D548 170 aa11.74□□□□□ -0.53
Ebf3-201ENSMUST00000033378 Gm11565A2A4M7 156 aa11.73□□□□□ -0.53
Ebf3-201ENSMUST00000033378 Plac8Q9JI48 112 aa11.73□□□□□ -0.53
Ebf3-201ENSMUST00000033378 Itpr3P70227 2670 aa11.7□□□□□ -0.54
Ebf3-201ENSMUST00000033378 Gm7138L7N2C3 230 aa11.7□□□□□ -0.54
Ebf3-201ENSMUST00000033378 Gm3238W4VSP7 230 aa11.7□□□□□ -0.54
Ebf3-201ENSMUST00000033378 A730071L15RikQ8C4X0 137 aa11.69□□□□□ -0.54
Ebf3-201ENSMUST00000033378 RetnlbQ99P86 105 aa11.68□□□□□ -0.54
Ebf3-201ENSMUST00000033378 AW011738F6S7Q2 159 aa11.67□□□□□ -0.54
Ebf3-201ENSMUST00000033378 Lrrc37aB1AWG4 3215 aa11.66□□□□□ -0.54
Ebf3-201ENSMUST00000033378 Szt2A2A9C3 3431 aa11.65□□□□□ -0.54
Ebf3-201ENSMUST00000033378 Celsr1O35161 3034 aa11.62□□□□□ -0.55
Ebf3-201ENSMUST00000033378 Celsr3Q91ZI0 3301 aa11.62□□□□□ -0.55
Ebf3-201ENSMUST00000033378 FryE9Q8I9 3020 aa11.6□□□□□ -0.55
Ebf3-201ENSMUST00000033378 2310034C09RikQ9D746 214 aa11.59□□□□□ -0.55
Ebf3-201ENSMUST00000033378 BptfA2A654 3036 aaKnown RBP11.58□□□□□ -0.56
Ebf3-201ENSMUST00000033378 Tep1P97499 2629 aa11.56□□□□□ -0.56
Ebf3-201ENSMUST00000033378 Gm7137J3QMW1 236 aa11.56□□□□□ -0.56
Ebf3-201ENSMUST00000033378 Mp68P56379 58 aa11.55□□□□□ -0.56
Ebf3-201ENSMUST00000033378 Muc2Q80Z19 2680 aa11.55□□□□□ -0.56
Ebf3-201ENSMUST00000033378 SmcpP15265 143 aa11.54□□□□□ -0.56
Ebf3-201ENSMUST00000033378 Gm21798J3QNU5 87 aa11.53□□□□□ -0.56
Ebf3-201ENSMUST00000033378 Cypt14J3QPF7 87 aa11.52□□□□□ -0.57
Ebf3-201ENSMUST00000033378 6030445D17RikE9Q8F9 148 aa11.51□□□□□ -0.57
Ebf3-201ENSMUST00000033378 FrylF8VQ05 3007 aa11.51□□□□□ -0.57
Ebf3-201ENSMUST00000033378 Tex15F8VPN2 2785 aa11.49□□□□□ -0.57
Ebf3-201ENSMUST00000033378 Stab2Q8R4U0 2559 aa11.46□□□□□ -0.58
Ebf3-201ENSMUST00000033378 Sprr1aQ62266 144 aa11.45□□□□□ -0.58
Ebf3-201ENSMUST00000033378 Nbeal2Q6ZQA0 2742 aa11.45□□□□□ -0.58
Ebf3-201ENSMUST00000033378 Gm10139O88245 57 aa11.45□□□□□ -0.58
Ebf3-201ENSMUST00000033378 Gm26620Q9CY65 116 aa11.44□□□□□ -0.58
Ebf3-201ENSMUST00000033378 Pkd1l1Q8R526 2615 aa11.44□□□□□ -0.58
Ebf3-201ENSMUST00000033378 Rnase13Q5GAM7 153 aa11.42□□□□□ -0.58
Ebf3-201ENSMUST00000033378 NbdyA0A0N4SUI7 68 aa11.42□□□□□ -0.58
Ebf3-201ENSMUST00000033378 Gm10065F6TJM2 114 aa11.42□□□□□ -0.58
Ebf3-201ENSMUST00000033378 Lama1P19137 3084 aa11.4□□□□□ -0.58
Ebf3-201ENSMUST00000033378 Col6a5A6H584 2640 aa11.39□□□□□ -0.59
Ebf3-201ENSMUST00000033378 Dmxl2Q8BPN8 3032 aa11.37□□□□□ -0.59
Ebf3-201ENSMUST00000033378 Igsf10Q3V1M1 2594 aa11.37□□□□□ -0.59
Ebf3-201ENSMUST00000033378 Igfn1Q3KNY0 2849 aa11.35□□□□□ -0.59
Ebf3-201ENSMUST00000033378 9530053A07RikE9PVG8 2581 aa11.34□□□□□ -0.59
Ebf3-201ENSMUST00000033378 Adgrg4B7ZCC9 3073 aa11.34□□□□□ -0.59
Ebf3-201ENSMUST00000033378 Odf3bQ5M8M2 238 aa11.34□□□□□ -0.59
Ebf3-201ENSMUST00000033378 Gm9508A0A1W2P7W0 230 aa11.34□□□□□ -0.59
Ebf3-201ENSMUST00000033378 Gm3646F6S692 53 aa11.32□□□□□ -0.6
Ebf3-201ENSMUST00000033378 Brca2P97929 3329 aa11.32□□□□□ -0.6
Ebf3-201ENSMUST00000033378 DspE9Q557 2883 aaKnown RBP11.31□□□□□ -0.6
Ebf3-201ENSMUST00000033378 Gm3880A0A1B0GSB3 72 aa11.3□□□□□ -0.6
Ebf3-201ENSMUST00000033378 Gm37013Q8K491 104 aa11.29□□□□□ -0.6
Ebf3-201ENSMUST00000033378 Hivep1Q03172 2688 aa11.28□□□□□ -0.6
Ebf3-201ENSMUST00000033378 Wdfy4E9Q2M9 3149 aa11.25□□□□□ -0.61
Ebf3-201ENSMUST00000033378 Utp20Q5XG71 2788 aaKnown RBP11.22□□□□□ -0.61
Ebf3-201ENSMUST00000033378 Col6a3E9PWQ3 3284 aa11.21□□□□□ -0.61
Ebf3-201ENSMUST00000033378 Zzef1Q5SSH7 2924 aa11.2□□□□□ -0.62
Ebf3-201ENSMUST00000033378 Gm16253D3Z167 63 aa11.19□□□□□ -0.62
Ebf3-201ENSMUST00000033378 4933415A04RikQ9D443 101 aa11.19□□□□□ -0.62
Ebf3-201ENSMUST00000033378 NbeaQ9EPN1 2936 aa11.18□□□□□ -0.62
Ebf3-201ENSMUST00000033378 Gm4491E0CX42 125 aa11.16□□□□□ -0.62
Ebf3-201ENSMUST00000033378 Gm36176A0A1W2P8D5 158 aa11.15□□□□□ -0.62
Ebf3-201ENSMUST00000033378 FlncQ8VHX6 2726 aaKnown RBP11.14□□□□□ -0.63
Ebf3-201ENSMUST00000033378 Celsr2Q9R0M0 2920 aa11.11□□□□□ -0.63
Ebf3-201ENSMUST00000033378 Gm9955Q8CEJ8 102 aa11.1□□□□□ -0.63
Ebf3-201ENSMUST00000033378 1700042G07RikB1AUF7 90 aa11.08□□□□□ -0.64
Ebf3-201ENSMUST00000033378 CriptO70333 101 aa11.07□□□□□ -0.64
Ebf3-201ENSMUST00000033378 Gm9821Q8K076 103 aa11.06□□□□□ -0.64
Ebf3-201ENSMUST00000033378 Chd9Q8BYH8 2885 aa11.05□□□□□ -0.64
Ebf3-201ENSMUST00000033378 OxtP35454 125 aa11.05□□□□□ -0.64
Ebf3-201ENSMUST00000033378 Gm17349F7BGH6 99 aa11.02□□□□□ -0.65
Ebf3-201ENSMUST00000033378 Dchs2A0A0A6YW72 3346 aa11.02□□□□□ -0.65
Ebf3-201ENSMUST00000033378 VcanQ62059 3357 aa11□□□□□ -0.65
Ebf3-201ENSMUST00000033378 TgO08710 2766 aa10.99□□□□□ -0.65
Ebf3-201ENSMUST00000033378 ApcQ61315 2845 aa10.98□□□□□ -0.65
Ebf3-201ENSMUST00000033378 Itpr2Q9Z329 2701 aa10.96□□□□□ -0.65
Ebf3-201ENSMUST00000033378 Gm2310J3QNJ2 377 aa10.93□□□□□ -0.66
Ebf3-201ENSMUST00000033378 Krtap29-1A2A5X4 342 aa10.9□□□□□ -0.67
Ebf3-201ENSMUST00000033378 Dchs1E9PVD3 3291 aa10.88□□□□□ -0.67
Ebf3-201ENSMUST00000033378 Trank1Q8BV79 2999 aa10.87□□□□□ -0.67
Ebf3-201ENSMUST00000033378 Srrm2Q8BTI8 2703 aaKnown RBP10.86□□□□□ -0.67
Ebf3-201ENSMUST00000033378 Nf1Q04690 2841 aa10.86□□□□□ -0.67
Ebf3-201ENSMUST00000033378 Krtap13O88375 197 aa10.83□□□□□ -0.68
Ebf3-201ENSMUST00000033378 FcgbpE9Q0B5 2583 aa10.79□□□□□ -0.68
Ebf3-201ENSMUST00000033378 2310050C09RikG5E8Z3 280 aa10.78□□□□□ -0.68
Ebf3-201ENSMUST00000033378 Krtap15-1Q9QZU5 150 aa10.77□□□□□ -0.69
Ebf3-201ENSMUST00000033378 2310061N02RikQ9D6S9 174 aa10.76□□□□□ -0.69
Ebf3-201ENSMUST00000033378 Pla2g10Q9QXX3 151 aa10.75□□□□□ -0.69
Ebf3-201ENSMUST00000033378 Wdfy3Q6VNB8 3508 aa10.75□□□□□ -0.69
Ebf3-201ENSMUST00000033378 SpegQ62407 3262 aa10.74□□□□□ -0.69
Ebf3-201ENSMUST00000033378 Pdzd2E9Q1M1 2796 aa10.73□□□□□ -0.69
Ebf3-201ENSMUST00000033378 RelnQ60841 3461 aa10.71□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms