RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Wfdc13Q5DQQ6 81 aa10.69□□□□□ -0.7
Sec61a1-201ENSMUST00000032168 Gm28539A0A087WSL9 92 aa10.69□□□□□ -0.7
Sec61a1-201ENSMUST00000032168 Igkv1-110A0A0B4J1I0 119 aa10.69□□□□□ -0.7
Sec61a1-201ENSMUST00000032168 Sfta2E9PXB6 77 aa10.68□□□□□ -0.7
Sec61a1-201ENSMUST00000032168 Pde6gP09174 87 aa10.68□□□□□ -0.7
Sec61a1-201ENSMUST00000032168 A930002H24RikQ8C8Y3 163 aa10.68□□□□□ -0.7
Sec61a1-201ENSMUST00000032168 Gm37389A0A0A6YW05 95 aa10.67□□□□□ -0.7
Sec61a1-201ENSMUST00000032168 Vpreb3D3Z6J4 130 aa10.67□□□□□ -0.7
Sec61a1-201ENSMUST00000032168 Fam19a3Q7TPG6 132 aa10.67□□□□□ -0.7
Sec61a1-201ENSMUST00000032168 PlecQ9QXS1 4691 aaKnown RBP10.67□□□□□ -0.7
Sec61a1-201ENSMUST00000032168 Phf5aP83870 110 aaKnown RBP10.66□□□□□ -0.7
Sec61a1-201ENSMUST00000032168 Defa21Q8C1P2 93 aa10.65□□□□□ -0.7
Sec61a1-201ENSMUST00000032168 Gm10401E9Q3K6 71 aa10.63□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 U90926O08546 118 aa10.63□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 4930518I15RikQ3V2W7 57 aa10.63□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 Gm9918Q8BUR5 174 aa10.63□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 Fam104aA2A6P4 185 aa10.62□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 Smim20D3Z7Q2 69 aa10.62□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 Sprr2jO70561 109 aa10.62□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 Gm17521F6QAC8 156 aa10.61□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 1700018G05RikA0A1B0GSI2 66 aa10.61□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 Serp2Q6TAW2 65 aa10.61□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 Zcchc13Q9D548 170 aa10.61□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 Ighv2-2A0A075B5P8 116 aa10.6□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 P01821 116 aa10.6□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 C130032M10RikQ8C888 123 aa10.6□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 1700012A03RikQ9DAF1 130 aa10.6□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 SmcpP15265 143 aa10.59□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 Gm44790A0A0N4SV91 103 aa10.59□□□□□ -0.71
Sec61a1-201ENSMUST00000032168 Defb9Q8R2I6 67 aa10.56□□□□□ -0.72
Sec61a1-201ENSMUST00000032168 Mrpl34Q99N91 92 aa10.55□□□□□ -0.72
Sec61a1-201ENSMUST00000032168 Dnah5Q8VHE6 4621 aa10.53□□□□□ -0.72
Sec61a1-201ENSMUST00000032168 Prr15lQ8JZM2 100 aa10.53□□□□□ -0.72
Sec61a1-201ENSMUST00000032168 B230307C23RikQ8BLB2 64 aa10.53□□□□□ -0.72
Sec61a1-201ENSMUST00000032168 Gm10570F6VB42 170 aa10.51□□□□□ -0.73
Sec61a1-201ENSMUST00000032168 Igkv3-4A0A140T8Q4 119 aa10.51□□□□□ -0.73
Sec61a1-201ENSMUST00000032168 Q8BT88 171 aa10.51□□□□□ -0.73
Sec61a1-201ENSMUST00000032168 Krtap10-4Q08EG8 221 aa10.5□□□□□ -0.73
Sec61a1-201ENSMUST00000032168 Wfdc10Q3V2J9 124 aa10.5□□□□□ -0.73
Sec61a1-201ENSMUST00000032168 Odf3bQ5M8M2 238 aa10.5□□□□□ -0.73
Sec61a1-201ENSMUST00000032168 Gm10139O88245 57 aa10.49□□□□□ -0.73
Sec61a1-201ENSMUST00000032168 Igkv3-7A0A0G2JE31 119 aa10.49□□□□□ -0.73
Sec61a1-201ENSMUST00000032168 Dnah7cA0A087WR13 4024 aa10.48□□□□□ -0.73
Sec61a1-201ENSMUST00000032168 BikO70337 150 aa10.48□□□□□ -0.73
Sec61a1-201ENSMUST00000032168 6030445D17RikE9Q8F9 148 aa10.47□□□□□ -0.73
Sec61a1-201ENSMUST00000032168 2310050C09RikG5E8Z3 280 aa10.46□□□□□ -0.73
Sec61a1-201ENSMUST00000032168 Dnah7aE9Q0T8 4024 aa10.45□□□□□ -0.74
Sec61a1-201ENSMUST00000032168 Ube2aQ9Z255 152 aa10.45□□□□□ -0.74
Sec61a1-201ENSMUST00000032168 Gm10642Q3TWM1 71 aa10.45□□□□□ -0.74
Sec61a1-201ENSMUST00000032168 Defb11Q8R2I7 77 aa10.45□□□□□ -0.74
Sec61a1-201ENSMUST00000032168 Ly6g6cQ9Z1Q4 126 aa10.44□□□□□ -0.74
Sec61a1-201ENSMUST00000032168 Gm21886J3QJU9 214 aa10.44□□□□□ -0.74
Sec61a1-201ENSMUST00000032168 Scgb1b2O35176 93 aa10.44□□□□□ -0.74
Sec61a1-201ENSMUST00000032168 Gm28230A0A0A0MQ91 144 aa10.42□□□□□ -0.74
Sec61a1-201ENSMUST00000032168 Igkv8-19A0A0G2JFN8 121 aa10.42□□□□□ -0.74
Sec61a1-201ENSMUST00000032168 Spink8Q09TK9 105 aa10.41□□□□□ -0.74
Sec61a1-201ENSMUST00000032168 UqcrqQ9CQ69 82 aa10.4□□□□□ -0.74
Sec61a1-201ENSMUST00000032168 Ndufc1Q9CQY9 76 aa10.4□□□□□ -0.74
Sec61a1-201ENSMUST00000032168 Gm12353A2AGJ4 60 aa10.39□□□□□ -0.75
Sec61a1-201ENSMUST00000032168 GhrhP16043 103 aa10.39□□□□□ -0.75
Sec61a1-201ENSMUST00000032168 AI606181Q8C7B9 129 aa10.39□□□□□ -0.75
Sec61a1-201ENSMUST00000032168 1600014C23RikQ9DAX4 101 aa10.39□□□□□ -0.75
Sec61a1-201ENSMUST00000032168 Reg3aO09037 175 aa10.38□□□□□ -0.75
Sec61a1-201ENSMUST00000032168 Gm10065F6TJM2 114 aa10.37□□□□□ -0.75
Sec61a1-201ENSMUST00000032168 Igkv3-10A0A0G2JGN0 119 aa10.37□□□□□ -0.75
Sec61a1-201ENSMUST00000032168 Igkv3-5A0A140T8M6 119 aa10.36□□□□□ -0.75
Sec61a1-201ENSMUST00000032168 Gm37013Q8K491 104 aa10.36□□□□□ -0.75
Sec61a1-201ENSMUST00000032168 Krtap29-1A2A5X4 342 aa10.35□□□□□ -0.75
Sec61a1-201ENSMUST00000032168 Rpl37aP61514 92 aa10.34□□□□□ -0.75
Sec61a1-201ENSMUST00000032168 Adm2Q7TNK8 150 aa10.34□□□□□ -0.75
Sec61a1-201ENSMUST00000032168 Gm27235Q3UW50 83 aa10.33□□□□□ -0.76
Sec61a1-201ENSMUST00000032168 Anapc11Q9CPX9 84 aa10.32□□□□□ -0.76
Sec61a1-201ENSMUST00000032168 Tmem258P61166 79 aa10.3□□□□□ -0.76
Sec61a1-201ENSMUST00000032168 SnurfQ9WU12 71 aa10.3□□□□□ -0.76
Sec61a1-201ENSMUST00000032168 Chchd10Q7TNL9 138 aa10.29□□□□□ -0.76
Sec61a1-201ENSMUST00000032168 Samd13D3YUG0 102 aa10.26□□□□□ -0.77
Sec61a1-201ENSMUST00000032168 Defb12Q8K4N3 78 aa10.23□□□□□ -0.77
Sec61a1-201ENSMUST00000032168 NbdyA0A0N4SUI7 68 aa10.22□□□□□ -0.77
Sec61a1-201ENSMUST00000032168 Gm19935A0A1B0GSF9 52 aa10.22□□□□□ -0.77
Sec61a1-201ENSMUST00000032168 Krtap10-10A0A1W2P7T6 217 aa10.21□□□□□ -0.78
Sec61a1-201ENSMUST00000032168 Q8K1L6 76 aa10.2□□□□□ -0.78
Sec61a1-201ENSMUST00000032168 Vps13dB1ART2 4390 aa10.2□□□□□ -0.78
Sec61a1-201ENSMUST00000032168 Krtap14O08640 167 aa10.19□□□□□ -0.78
Sec61a1-201ENSMUST00000032168 Brk1Q91VR8 75 aa10.19□□□□□ -0.78
Sec61a1-201ENSMUST00000032168 Stard9Q80TF6 4561 aa10.19□□□□□ -0.78
Sec61a1-201ENSMUST00000032168 Krtap13O88375 197 aa10.16□□□□□ -0.78
Sec61a1-201ENSMUST00000032168 A0A286YE49 62 aa10.15□□□□□ -0.78
Sec61a1-201ENSMUST00000032168 Pkd1O08852 4293 aa10.15□□□□□ -0.79
Sec61a1-201ENSMUST00000032168 Gpr15lA0A0B4J1N3 78 aa10.14□□□□□ -0.79
Sec61a1-201ENSMUST00000032168 Gm2696A0A1W2P709 240 aa10.14□□□□□ -0.79
Sec61a1-201ENSMUST00000032168 1700074P13RikQ9D9G7 251 aa10.12□□□□□ -0.79
Sec61a1-201ENSMUST00000032168 Tnp2P11378 117 aa10.11□□□□□ -0.79
Sec61a1-201ENSMUST00000032168 Hectd4E9Q2E4 4418 aa10.11□□□□□ -0.79
Sec61a1-201ENSMUST00000032168 Rps28P62858 69 aaKnown RBP10.1□□□□□ -0.79
Sec61a1-201ENSMUST00000032168 Coa6Q8BGD8 79 aa10.1□□□□□ -0.79
Sec61a1-201ENSMUST00000032168 Gm2310J3QNJ2 377 aa10.08□□□□□ -0.8
Sec61a1-201ENSMUST00000032168 Pet100P0DJE0 76 aa10.08□□□□□ -0.8
Sec61a1-201ENSMUST00000032168 Defb39Q70KL3 74 aa10.08□□□□□ -0.8
Sec61a1-201ENSMUST00000032168 Cypt14J3QPF7 87 aa10.06□□□□□ -0.8
Sec61a1-201ENSMUST00000032168 Lrp1bQ9JI18 4599 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms