RNA–Protein interactions for RNA: ENSMUST00000031377.8

Scarb2-201, Transcript of Lysosome membrane protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scarb2, Length 4,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2-201ENSMUST00000031377 Igkv8-19A0A0G2JFN8 121 aa8.92□□□□□ -0.98
Scarb2-201ENSMUST00000031377 H2al1mQ9DAD9 105 aa8.92□□□□□ -0.98
Scarb2-201ENSMUST00000031377 AplnQ9R0R4 77 aa8.91□□□□□ -0.98
Scarb2-201ENSMUST00000031377 Smim29Q8R043 75 aa8.9□□□□□ -0.98
Scarb2-201ENSMUST00000031377 Spint4Q9D263 159 aa8.9□□□□□ -0.98
Scarb2-201ENSMUST00000031377 Gm884A2A9H6 3643 aa8.9□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Col6a5A6H584 2640 aa8.9□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Rpl37aP61514 92 aa8.89□□□□□ -0.99
Scarb2-201ENSMUST00000031377 CnbpP53996 178 aaKnown RBP8.89□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Wfdc3Q14AE4 130 aa8.89□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Defb10Q8R2I8 73 aa8.89□□□□□ -0.99
Scarb2-201ENSMUST00000031377 1600014C23RikQ9DAX4 101 aa8.89□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Q8K1L6 76 aa8.89□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Hivep1Q03172 2688 aa8.88□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Adm2Q7TNK8 150 aa8.88□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Phf5aP83870 110 aaKnown RBP8.87□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Q8BT88 171 aa8.86□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Gm4707V9GXN5 68 aa8.86□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Gm7137J3QMW1 236 aa8.84□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Gm10642Q3TWM1 71 aa8.84□□□□□ -0.99
Scarb2-201ENSMUST00000031377 Gm11213A0A1B0GR83 88 aa8.83□□□□□ -1
Scarb2-201ENSMUST00000031377 Gm10837Q3UTT8 145 aa8.83□□□□□ -1
Scarb2-201ENSMUST00000031377 Prol1E9PYQ4 312 aa8.82□□□□□ -1
Scarb2-201ENSMUST00000031377 Ccdc179J3QM76 67 aa8.82□□□□□ -1
Scarb2-201ENSMUST00000031377 P84750 121 aa8.8□□□□□ -1
Scarb2-201ENSMUST00000031377 Lama5Q61001 3718 aa8.79□□□□□ -1
Scarb2-201ENSMUST00000031377 Ndufb1P0DN34 57 aa8.79□□□□□ -1
Scarb2-201ENSMUST00000031377 Chchd10Q7TNL9 138 aa8.79□□□□□ -1
Scarb2-201ENSMUST00000031377 Znf706Q9D115 76 aaKnown RBP8.79□□□□□ -1
Scarb2-201ENSMUST00000031377 Gm7276Q3TYW4 209 aa8.78□□□□□ -1
Scarb2-201ENSMUST00000031377 Defb39Q70KL3 74 aa8.78□□□□□ -1
Scarb2-201ENSMUST00000031377 A930002H24RikQ8C8Y3 163 aa8.77□□□□□ -1
Scarb2-201ENSMUST00000031377 Ly6g6cQ9Z1Q4 126 aa8.77□□□□□ -1
Scarb2-201ENSMUST00000031377 Pkd1l1Q8R526 2615 aa8.77□□□□□ -1
Scarb2-201ENSMUST00000031377 Muc5acE9QAQ8 3455 aa8.76□□□□□ -1.01
Scarb2-201ENSMUST00000031377 Gm10160F6Y577 67 aa8.76□□□□□ -1.01
Scarb2-201ENSMUST00000031377 Znf414Q9DCK4 299 aa8.76□□□□□ -1.01
Scarb2-201ENSMUST00000031377 Coa5Q99M07 74 aa8.75□□□□□ -1.01
Scarb2-201ENSMUST00000031377 Helz2E9QAM5 2947 aaKnown RBP8.75□□□□□ -1.01
Scarb2-201ENSMUST00000031377 Cdc42se1Q8BHL7 80 aa8.73□□□□□ -1.01
Scarb2-201ENSMUST00000031377 Tenm3Q9WTS6 2715 aa8.72□□□□□ -1.01
Scarb2-201ENSMUST00000031377 Wfdc17Q5SSJ1 76 aa8.72□□□□□ -1.01
Scarb2-201ENSMUST00000031377 Stab2Q8R4U0 2559 aa8.72□□□□□ -1.01
Scarb2-201ENSMUST00000031377 Gm28374F6SG70 93 aa8.7□□□□□ -1.02
Scarb2-201ENSMUST00000031377 Bean1Q9EQG5 255 aa8.7□□□□□ -1.02
Scarb2-201ENSMUST00000031377 AI606181Q8C7B9 129 aa8.7□□□□□ -1.02
Scarb2-201ENSMUST00000031377 Igsf10Q3V1M1 2594 aa8.7□□□□□ -1.02
Scarb2-201ENSMUST00000031377 A730071L15RikQ8C4X0 137 aa8.68□□□□□ -1.02
Scarb2-201ENSMUST00000031377 Itpr2Q9Z329 2701 aa8.67□□□□□ -1.02
Scarb2-201ENSMUST00000031377 Pdzd2E9Q1M1 2796 aa8.65□□□□□ -1.02
Scarb2-201ENSMUST00000031377 Phxr5P08399 672 aa8.65□□□□□ -1.02
Scarb2-201ENSMUST00000031377 ApcQ61315 2845 aa8.62□□□□□ -1.03
Scarb2-201ENSMUST00000031377 Gm27235Q3UW50 83 aa8.62□□□□□ -1.03
Scarb2-201ENSMUST00000031377 SmcpP15265 143 aa8.61□□□□□ -1.03
Scarb2-201ENSMUST00000031377 Defb9Q8R2I6 67 aa8.61□□□□□ -1.03
Scarb2-201ENSMUST00000031377 Plac8Q9JI48 112 aa8.61□□□□□ -1.03
Scarb2-201ENSMUST00000031377 Anapc11Q9CPX9 84 aa8.6□□□□□ -1.03
Scarb2-201ENSMUST00000031377 Svep1A2AVA0 3567 aa8.6□□□□□ -1.03
Scarb2-201ENSMUST00000031377 Gm20661K7N787 53 aa8.59□□□□□ -1.03
Scarb2-201ENSMUST00000031377 Spaca4Q80ZQ0 127 aa8.59□□□□□ -1.03
Scarb2-201ENSMUST00000031377 Chtf8P0CG14 533 aa8.58□□□□□ -1.04
Scarb2-201ENSMUST00000031377 Gm36176A0A1W2P8D5 158 aa8.58□□□□□ -1.04
Scarb2-201ENSMUST00000031377 Fam104aA2A6P4 185 aa8.57□□□□□ -1.04
Scarb2-201ENSMUST00000031377 Gm10999F6Q4M4 69 aa8.56□□□□□ -1.04
Scarb2-201ENSMUST00000031377 Phxr4P15974 95 aa8.56□□□□□ -1.04
Scarb2-201ENSMUST00000031377 Muc4Q8JZM8 3443 aa8.56□□□□□ -1.04
Scarb2-201ENSMUST00000031377 9530053A07RikE9PVG8 2581 aa8.55□□□□□ -1.04
Scarb2-201ENSMUST00000031377 Spata3Q9D9T6 193 aa8.55□□□□□ -1.04
Scarb2-201ENSMUST00000031377 Gm9508A0A1W2P7W0 230 aa8.53□□□□□ -1.04
Scarb2-201ENSMUST00000031377 Zcchc13Q9D548 170 aa8.52□□□□□ -1.05
Scarb2-201ENSMUST00000031377 Gpr15lA0A0B4J1N3 78 aa8.52□□□□□ -1.05
Scarb2-201ENSMUST00000031377 Cmya5Q70KF4 3739 aa8.49□□□□□ -1.05
Scarb2-201ENSMUST00000031377 Defb1P56386 69 aa8.49□□□□□ -1.05
Scarb2-201ENSMUST00000031377 OtogO55225 2910 aa8.48□□□□□ -1.05
Scarb2-201ENSMUST00000031377 TgO08710 2766 aa8.47□□□□□ -1.05
Scarb2-201ENSMUST00000031377 Sprr1aQ62266 144 aa8.47□□□□□ -1.05
Scarb2-201ENSMUST00000031377 Q8BGJ3 129 aa8.42□□□□□ -1.06
Scarb2-201ENSMUST00000031377 Srrm2Q8BTI8 2703 aaKnown RBP8.41□□□□□ -1.06
Scarb2-201ENSMUST00000031377 Limd2Q8BGB5 128 aa8.4□□□□□ -1.07
Scarb2-201ENSMUST00000031377 Cypt15B1AXS0 87 aa8.37□□□□□ -1.07
Scarb2-201ENSMUST00000031377 Gm10139O88245 57 aa8.36□□□□□ -1.07
Scarb2-201ENSMUST00000031377 Defb11Q8R2I7 77 aa8.36□□□□□ -1.07
Scarb2-201ENSMUST00000031377 AW011738F6S7Q2 159 aa8.33□□□□□ -1.08
Scarb2-201ENSMUST00000031377 6030445D17RikE9Q8F9 148 aa8.32□□□□□ -1.08
Scarb2-201ENSMUST00000031377 RetnlbQ99P86 105 aa8.32□□□□□ -1.08
Scarb2-201ENSMUST00000031377 Odf3bQ5M8M2 238 aa8.31□□□□□ -1.08
Scarb2-201ENSMUST00000031377 Gm17349F7BGH6 99 aa8.26□□□□□ -1.09
Scarb2-201ENSMUST00000031377 Cypt14J3QPF7 87 aa8.26□□□□□ -1.09
Scarb2-201ENSMUST00000031377 Gm10065F6TJM2 114 aa8.25□□□□□ -1.09
Scarb2-201ENSMUST00000031377 4930507D05RikQ8C9C9 103 aa8.24□□□□□ -1.09
Scarb2-201ENSMUST00000031377 Tenm4Q3UHK6 2771 aa8.24□□□□□ -1.09
Scarb2-201ENSMUST00000031377 NbdyA0A0N4SUI7 68 aa8.24□□□□□ -1.09
Scarb2-201ENSMUST00000031377 Uqcr11Q9CPX8 56 aa8.24□□□□□ -1.09
Scarb2-201ENSMUST00000031377 Gm10643Q3URG9 111 aa8.22□□□□□ -1.09
Scarb2-201ENSMUST00000031377 Gm37013Q8K491 104 aa8.21□□□□□ -1.09
Scarb2-201ENSMUST00000031377 Gm21798J3QNU5 87 aa8.21□□□□□ -1.09
Scarb2-201ENSMUST00000031377 2310034C09RikQ9D746 214 aa8.19□□□□□ -1.1
Scarb2-201ENSMUST00000031377 Gm12216A0A1W2P827 62 aa8.17□□□□□ -1.1
Scarb2-201ENSMUST00000031377 Gm9507D3Z5T3 223 aa8.15□□□□□ -1.1
Scarb2-201ENSMUST00000031377 2310061N02RikQ9D6S9 174 aa8.13□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms