RNA–Protein interactions for RNA: ENSMUST00000026665.7

Cbx4-201, Transcript of E3 SUMO-protein ligase CBX4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cbx4, Length 5,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4-201ENSMUST00000026665 Fam104aA2A6P4 185 aa13.03□□□□□ -0.32
Cbx4-201ENSMUST00000026665 Defb9Q8R2I6 67 aa13.03□□□□□ -0.32
Cbx4-201ENSMUST00000026665 Lama1P19137 3084 aa13.03□□□□□ -0.32
Cbx4-201ENSMUST00000026665 Celsr3Q91ZI0 3301 aa13.02□□□□□ -0.32
Cbx4-201ENSMUST00000026665 Frem2Q6NVD0 3160 aa13.01□□□□□ -0.33
Cbx4-201ENSMUST00000026665 Uqcr11Q9CPX8 56 aa13□□□□□ -0.33
Cbx4-201ENSMUST00000026665 Gm10643Q3URG9 111 aa13□□□□□ -0.33
Cbx4-201ENSMUST00000026665 Anapc11Q9CPX9 84 aa12.95□□□□□ -0.34
Cbx4-201ENSMUST00000026665 Kmt2bO08550 2713 aa12.95□□□□□ -0.34
Cbx4-201ENSMUST00000026665 Cypt15B1AXS0 87 aa12.94□□□□□ -0.34
Cbx4-201ENSMUST00000026665 Defb11Q8R2I7 77 aa12.94□□□□□ -0.34
Cbx4-201ENSMUST00000026665 FryE9Q8I9 3020 aa12.94□□□□□ -0.34
Cbx4-201ENSMUST00000026665 Zcchc13Q9D548 170 aa12.92□□□□□ -0.34
Cbx4-201ENSMUST00000026665 AW011738F6S7Q2 159 aa12.9□□□□□ -0.34
Cbx4-201ENSMUST00000026665 Phxr5P08399 672 aa12.9□□□□□ -0.34
Cbx4-201ENSMUST00000026665 Celsr1O35161 3034 aa12.89□□□□□ -0.35
Cbx4-201ENSMUST00000026665 Stab1Q8R4Y4 2571 aa12.89□□□□□ -0.35
Cbx4-201ENSMUST00000026665 Wdfy4E9Q2M9 3149 aa12.88□□□□□ -0.35
Cbx4-201ENSMUST00000026665 Plac8Q9JI48 112 aa12.87□□□□□ -0.35
Cbx4-201ENSMUST00000026665 Gm7138L7N2C3 230 aa12.86□□□□□ -0.35
Cbx4-201ENSMUST00000026665 Gm3238W4VSP7 230 aa12.86□□□□□ -0.35
Cbx4-201ENSMUST00000026665 Akap13E9Q394 2776 aa12.86□□□□□ -0.35
Cbx4-201ENSMUST00000026665 Mp68P56379 58 aa12.84□□□□□ -0.35
Cbx4-201ENSMUST00000026665 A730071L15RikQ8C4X0 137 aa12.83□□□□□ -0.36
Cbx4-201ENSMUST00000026665 Brca2P97929 3329 aa12.83□□□□□ -0.36
Cbx4-201ENSMUST00000026665 Chd6A3KFM7 2711 aa12.79□□□□□ -0.36
Cbx4-201ENSMUST00000026665 RetnlbQ99P86 105 aa12.79□□□□□ -0.36
Cbx4-201ENSMUST00000026665 Muc2Q80Z19 2680 aa12.78□□□□□ -0.36
Cbx4-201ENSMUST00000026665 BptfA2A654 3036 aaKnown RBP12.78□□□□□ -0.36
Cbx4-201ENSMUST00000026665 Col6a3E9PWQ3 3284 aa12.76□□□□□ -0.37
Cbx4-201ENSMUST00000026665 Dmxl2Q8BPN8 3032 aa12.76□□□□□ -0.37
Cbx4-201ENSMUST00000026665 Ubr5Q80TP3 2792 aa12.74□□□□□ -0.37
Cbx4-201ENSMUST00000026665 Itpr3P70227 2670 aa12.73□□□□□ -0.37
Cbx4-201ENSMUST00000026665 Gm7137J3QMW1 236 aa12.69□□□□□ -0.38
Cbx4-201ENSMUST00000026665 2310034C09RikQ9D746 214 aa12.67□□□□□ -0.38
Cbx4-201ENSMUST00000026665 Cypt14J3QPF7 87 aa12.67□□□□□ -0.38
Cbx4-201ENSMUST00000026665 SmcpP15265 143 aa12.67□□□□□ -0.38
Cbx4-201ENSMUST00000026665 Mast4Q811L6 2618 aa12.66□□□□□ -0.38
Cbx4-201ENSMUST00000026665 Adgrg4B7ZCC9 3073 aa12.65□□□□□ -0.38
Cbx4-201ENSMUST00000026665 Sprr1aQ62266 144 aa12.62□□□□□ -0.39
Cbx4-201ENSMUST00000026665 6030445D17RikE9Q8F9 148 aa12.61□□□□□ -0.39
Cbx4-201ENSMUST00000026665 Gm21798J3QNU5 87 aa12.6□□□□□ -0.39
Cbx4-201ENSMUST00000026665 Gm10139O88245 57 aa12.6□□□□□ -0.39
Cbx4-201ENSMUST00000026665 NbeaQ9EPN1 2936 aa12.58□□□□□ -0.4
Cbx4-201ENSMUST00000026665 VcanQ62059 3357 aa12.57□□□□□ -0.4
Cbx4-201ENSMUST00000026665 Gm10065F6TJM2 114 aa12.57□□□□□ -0.4
Cbx4-201ENSMUST00000026665 NbdyA0A0N4SUI7 68 aa12.56□□□□□ -0.4
Cbx4-201ENSMUST00000026665 Gm26620Q9CY65 116 aa12.54□□□□□ -0.4
Cbx4-201ENSMUST00000026665 DspE9Q557 2883 aaKnown RBP12.5□□□□□ -0.41
Cbx4-201ENSMUST00000026665 Odf3bQ5M8M2 238 aa12.48□□□□□ -0.41
Cbx4-201ENSMUST00000026665 Utp20Q5XG71 2788 aaKnown RBP12.47□□□□□ -0.41
Cbx4-201ENSMUST00000026665 Rnase13Q5GAM7 153 aa12.46□□□□□ -0.41
Cbx4-201ENSMUST00000026665 Gm9508A0A1W2P7W0 230 aa12.42□□□□□ -0.42
Cbx4-201ENSMUST00000026665 Zzef1Q5SSH7 2924 aa12.42□□□□□ -0.42
Cbx4-201ENSMUST00000026665 Wdfy3Q6VNB8 3508 aa12.41□□□□□ -0.42
Cbx4-201ENSMUST00000026665 Tep1P97499 2629 aa12.41□□□□□ -0.42
Cbx4-201ENSMUST00000026665 Gm20538F6Z9R1 75 aa12.41□□□□□ -0.42
Cbx4-201ENSMUST00000026665 Gm37013Q8K491 104 aa12.39□□□□□ -0.43
Cbx4-201ENSMUST00000026665 Gm3646F6S692 53 aa12.38□□□□□ -0.43
Cbx4-201ENSMUST00000026665 Col6a5A6H584 2640 aa12.37□□□□□ -0.43
Cbx4-201ENSMUST00000026665 FlncQ8VHX6 2726 aaKnown RBP12.37□□□□□ -0.43
Cbx4-201ENSMUST00000026665 Stab2Q8R4U0 2559 aa12.36□□□□□ -0.43
Cbx4-201ENSMUST00000026665 Dchs2A0A0A6YW72 3346 aa12.35□□□□□ -0.43
Cbx4-201ENSMUST00000026665 Nbeal2Q6ZQA0 2742 aa12.35□□□□□ -0.43
Cbx4-201ENSMUST00000026665 Tex15F8VPN2 2785 aa12.33□□□□□ -0.43
Cbx4-201ENSMUST00000026665 Gm3880A0A1B0GSB3 72 aa12.33□□□□□ -0.44
Cbx4-201ENSMUST00000026665 Dchs1E9PVD3 3291 aa12.33□□□□□ -0.44
Cbx4-201ENSMUST00000026665 Igsf10Q3V1M1 2594 aa12.32□□□□□ -0.44
Cbx4-201ENSMUST00000026665 Gm16253D3Z167 63 aa12.3□□□□□ -0.44
Cbx4-201ENSMUST00000026665 Hivep1Q03172 2688 aa12.3□□□□□ -0.44
Cbx4-201ENSMUST00000026665 Gm36176A0A1W2P8D5 158 aa12.29□□□□□ -0.44
Cbx4-201ENSMUST00000026665 Pkd1l1Q8R526 2615 aa12.26□□□□□ -0.45
Cbx4-201ENSMUST00000026665 Igfn1Q3KNY0 2849 aa12.26□□□□□ -0.45
Cbx4-201ENSMUST00000026665 4933415A04RikQ9D443 101 aa12.25□□□□□ -0.45
Cbx4-201ENSMUST00000026665 Gm4491E0CX42 125 aa12.25□□□□□ -0.45
Cbx4-201ENSMUST00000026665 RelnQ60841 3461 aa12.23□□□□□ -0.45
Cbx4-201ENSMUST00000026665 Trank1Q8BV79 2999 aa12.22□□□□□ -0.45
Cbx4-201ENSMUST00000026665 Myo15aQ9QZZ4 3511 aa12.18□□□□□ -0.46
Cbx4-201ENSMUST00000026665 OxtP35454 125 aa12.17□□□□□ -0.46
Cbx4-201ENSMUST00000026665 CriptO70333 101 aa12.17□□□□□ -0.46
Cbx4-201ENSMUST00000026665 9530053A07RikE9PVG8 2581 aa12.17□□□□□ -0.46
Cbx4-201ENSMUST00000026665 Gm9955Q8CEJ8 102 aa12.16□□□□□ -0.46
Cbx4-201ENSMUST00000026665 Gm17349F7BGH6 99 aa12.15□□□□□ -0.47
Cbx4-201ENSMUST00000026665 Celsr2Q9R0M0 2920 aa12.13□□□□□ -0.47
Cbx4-201ENSMUST00000026665 Chd9Q8BYH8 2885 aa12.13□□□□□ -0.47
Cbx4-201ENSMUST00000026665 1700042G07RikB1AUF7 90 aa12.1□□□□□ -0.47
Cbx4-201ENSMUST00000026665 DmdP11531 3678 aa12.1□□□□□ -0.47
Cbx4-201ENSMUST00000026665 Itpr2Q9Z329 2701 aa12.08□□□□□ -0.48
Cbx4-201ENSMUST00000026665 SpegQ62407 3262 aa12.07□□□□□ -0.48
Cbx4-201ENSMUST00000026665 Gm9821Q8K076 103 aa12.06□□□□□ -0.48
Cbx4-201ENSMUST00000026665 Gm2310J3QNJ2 377 aa12.03□□□□□ -0.48
Cbx4-201ENSMUST00000026665 Krtap29-1A2A5X4 342 aa12.03□□□□□ -0.48
Cbx4-201ENSMUST00000026665 Nf1Q04690 2841 aa12.01□□□□□ -0.49
Cbx4-201ENSMUST00000026665 TgO08710 2766 aa11.94□□□□□ -0.5
Cbx4-201ENSMUST00000026665 ApcQ61315 2845 aa11.92□□□□□ -0.5
Cbx4-201ENSMUST00000026665 2310061N02RikQ9D6S9 174 aa11.87□□□□□ -0.51
Cbx4-201ENSMUST00000026665 Krtap13O88375 197 aa11.86□□□□□ -0.51
Cbx4-201ENSMUST00000026665 Akap9Q70FJ1 3797 aa11.86□□□□□ -0.51
Cbx4-201ENSMUST00000026665 Vps13cQ8BX70 3748 aa11.86□□□□□ -0.51
Cbx4-201ENSMUST00000026665 2310050C09RikG5E8Z3 280 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms