RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Gm10267M0QWD8 85 aa12.21□□□□□ -0.46
Ubp1-201ENSMUST00000009885 Igkv3-10A0A0G2JGN0 119 aa12.18□□□□□ -0.46
Ubp1-201ENSMUST00000009885 Gm16485Q8C4B7 115 aa12.17□□□□□ -0.46
Ubp1-201ENSMUST00000009885 Igkv3-12A0A140T8P0 119 aa12.16□□□□□ -0.46
Ubp1-201ENSMUST00000009885 Gm7276Q3TYW4 209 aa12.16□□□□□ -0.46
Ubp1-201ENSMUST00000009885 Rpl37aP61514 92 aa12.15□□□□□ -0.46
Ubp1-201ENSMUST00000009885 A930002H24RikQ8C8Y3 163 aa12.15□□□□□ -0.46
Ubp1-201ENSMUST00000009885 Xirp2Q4U4S6 3784 aa12.15□□□□□ -0.46
Ubp1-201ENSMUST00000009885 FlnbQ80X90 2602 aaKnown RBP12.15□□□□□ -0.47
Ubp1-201ENSMUST00000009885 Dmac1Q9CQ00 111 aa12.14□□□□□ -0.47
Ubp1-201ENSMUST00000009885 Sox16Q62247 57 aa12.12□□□□□ -0.47
Ubp1-201ENSMUST00000009885 SptssbQ925E8 76 aa12.11□□□□□ -0.47
Ubp1-201ENSMUST00000009885 Kmt2bO08550 2713 aa12.11□□□□□ -0.47
Ubp1-201ENSMUST00000009885 B9d2Q3UK10 175 aa12.09□□□□□ -0.47
Ubp1-201ENSMUST00000009885 Mast4Q811L6 2618 aa12.09□□□□□ -0.47
Ubp1-201ENSMUST00000009885 Gm28230A0A0A0MQ91 144 aa12.08□□□□□ -0.48
Ubp1-201ENSMUST00000009885 Ube2aQ9Z255 152 aa12.08□□□□□ -0.48
Ubp1-201ENSMUST00000009885 P84750 121 aa12.08□□□□□ -0.48
Ubp1-201ENSMUST00000009885 Wfdc6bF6ULY1 148 aa12.05□□□□□ -0.48
Ubp1-201ENSMUST00000009885 Hivep1Q03172 2688 aa12.04□□□□□ -0.48
Ubp1-201ENSMUST00000009885 Gm11627A6PWP4 55 aa11.99□□□□□ -0.49
Ubp1-201ENSMUST00000009885 Phxr4P15974 95 aa11.98□□□□□ -0.49
Ubp1-201ENSMUST00000009885 Itpr2Q9Z329 2701 aa11.97□□□□□ -0.49
Ubp1-201ENSMUST00000009885 Gm7138L7N2C3 230 aa11.97□□□□□ -0.49
Ubp1-201ENSMUST00000009885 Gm3238W4VSP7 230 aa11.97□□□□□ -0.49
Ubp1-201ENSMUST00000009885 Igkv3-7A0A0G2JE31 119 aa11.97□□□□□ -0.49
Ubp1-201ENSMUST00000009885 AplnQ9R0R4 77 aa11.97□□□□□ -0.49
Ubp1-201ENSMUST00000009885 Gm16181B0V2H2 73 aa11.96□□□□□ -0.49
Ubp1-201ENSMUST00000009885 Chtf8P0CG14 533 aa11.95□□□□□ -0.5
Ubp1-201ENSMUST00000009885 TgO08710 2766 aa11.94□□□□□ -0.5
Ubp1-201ENSMUST00000009885 Zcchc13Q9D548 170 aa11.94□□□□□ -0.5
Ubp1-201ENSMUST00000009885 SycnQ8VCK7 134 aa11.92□□□□□ -0.5
Ubp1-201ENSMUST00000009885 FasnP19096 2504 aaKnown RBP11.91□□□□□ -0.5
Ubp1-201ENSMUST00000009885 Igkv3-5A0A140T8M6 119 aa11.91□□□□□ -0.5
Ubp1-201ENSMUST00000009885 Prol1E9PYQ4 312 aa11.89□□□□□ -0.51
Ubp1-201ENSMUST00000009885 Gm10160F6Y577 67 aa11.88□□□□□ -0.51
Ubp1-201ENSMUST00000009885 Wfdc10Q3V2J9 124 aa11.86□□□□□ -0.51
Ubp1-201ENSMUST00000009885 Ndufs5Q99LY9 106 aa11.85□□□□□ -0.51
Ubp1-201ENSMUST00000009885 Tenm1Q9WTS4 2731 aa11.85□□□□□ -0.51
Ubp1-201ENSMUST00000009885 4933415A04RikQ9D443 101 aa11.82□□□□□ -0.52
Ubp1-201ENSMUST00000009885 U90926O08546 118 aa11.82□□□□□ -0.52
Ubp1-201ENSMUST00000009885 BsnO88737 3942 aa11.8□□□□□ -0.52
Ubp1-201ENSMUST00000009885 Phf5aP83870 110 aaKnown RBP11.8□□□□□ -0.52
Ubp1-201ENSMUST00000009885 Chchd10Q7TNL9 138 aa11.8□□□□□ -0.52
Ubp1-201ENSMUST00000009885 Gm20661K7N787 53 aa11.8□□□□□ -0.52
Ubp1-201ENSMUST00000009885 Srrm2Q8BTI8 2703 aaKnown RBP11.8□□□□□ -0.52
Ubp1-201ENSMUST00000009885 Fbn1Q61554 2873 aaKnown RBP11.79□□□□□ -0.52
Ubp1-201ENSMUST00000009885 Gm7137J3QMW1 236 aa11.78□□□□□ -0.52
Ubp1-201ENSMUST00000009885 Hspg2Q05793 3707 aaKnown RBP11.78□□□□□ -0.52
Ubp1-201ENSMUST00000009885 Fam104aA2A6P4 185 aa11.77□□□□□ -0.52
Ubp1-201ENSMUST00000009885 Spata3Q9D9T6 193 aa11.77□□□□□ -0.52
Ubp1-201ENSMUST00000009885 Gm20604F8WIA3 75 aa11.75□□□□□ -0.53
Ubp1-201ENSMUST00000009885 1700012A03RikQ9DAF1 130 aa11.75□□□□□ -0.53
Ubp1-201ENSMUST00000009885 Igkv3-3A0A140T8Q0 119 aa11.75□□□□□ -0.53
Ubp1-201ENSMUST00000009885 Phxr5P08399 672 aa11.74□□□□□ -0.53
Ubp1-201ENSMUST00000009885 Ndufb1P0DN34 57 aa11.73□□□□□ -0.53
Ubp1-201ENSMUST00000009885 Stab2Q8R4U0 2559 aa11.73□□□□□ -0.53
Ubp1-201ENSMUST00000009885 Sprr1aQ62266 144 aa11.73□□□□□ -0.53
Ubp1-201ENSMUST00000009885 Gm37013Q8K491 104 aa11.73□□□□□ -0.53
Ubp1-201ENSMUST00000009885 Ank2Q8C8R3 3898 aa11.73□□□□□ -0.53
Ubp1-201ENSMUST00000009885 Odf3bQ5M8M2 238 aa11.7□□□□□ -0.54
Ubp1-201ENSMUST00000009885 Pkd1l1Q8R526 2615 aa11.69□□□□□ -0.54
Ubp1-201ENSMUST00000009885 Col7a1Q63870 2944 aa11.68□□□□□ -0.54
Ubp1-201ENSMUST00000009885 VwfQ8CIZ8 2813 aa11.67□□□□□ -0.54
Ubp1-201ENSMUST00000009885 Igsf10Q3V1M1 2594 aa11.67□□□□□ -0.54
Ubp1-201ENSMUST00000009885 Gm10837Q3UTT8 145 aa11.66□□□□□ -0.54
Ubp1-201ENSMUST00000009885 Defb13Q8R2I4 64 aa11.65□□□□□ -0.54
Ubp1-201ENSMUST00000009885 Gm4707V9GXN5 68 aa11.65□□□□□ -0.54
Ubp1-201ENSMUST00000009885 Gm10642Q3TWM1 71 aa11.64□□□□□ -0.55
Ubp1-201ENSMUST00000009885 Tenm4Q3UHK6 2771 aa11.59□□□□□ -0.55
Ubp1-201ENSMUST00000009885 Nupr2Q497P3 102 aa11.59□□□□□ -0.55
Ubp1-201ENSMUST00000009885 Gm9508A0A1W2P7W0 230 aa11.58□□□□□ -0.56
Ubp1-201ENSMUST00000009885 Gm3646F6S692 53 aa11.56□□□□□ -0.56
Ubp1-201ENSMUST00000009885 Gm10139O88245 57 aa11.56□□□□□ -0.56
Ubp1-201ENSMUST00000009885 Anapc11Q9CPX9 84 aa11.53□□□□□ -0.56
Ubp1-201ENSMUST00000009885 9530053A07RikE9PVG8 2581 aa11.52□□□□□ -0.57
Ubp1-201ENSMUST00000009885 Wfdc3Q14AE4 130 aa11.51□□□□□ -0.57
Ubp1-201ENSMUST00000009885 1700042G07RikB1AUF7 90 aa11.51□□□□□ -0.57
Ubp1-201ENSMUST00000009885 Defb9Q8R2I6 67 aa11.51□□□□□ -0.57
Ubp1-201ENSMUST00000009885 Gm26620Q9CY65 116 aa11.51□□□□□ -0.57
Ubp1-201ENSMUST00000009885 Gm36176A0A1W2P8D5 158 aa11.49□□□□□ -0.57
Ubp1-201ENSMUST00000009885 Ccdc179J3QM76 67 aa11.49□□□□□ -0.57
Ubp1-201ENSMUST00000009885 Gm10643Q3URG9 111 aa11.49□□□□□ -0.57
Ubp1-201ENSMUST00000009885 Gm2310J3QNJ2 377 aa11.45□□□□□ -0.58
Ubp1-201ENSMUST00000009885 Adm2Q7TNK8 150 aa11.45□□□□□ -0.58
Ubp1-201ENSMUST00000009885 Gm27235Q3UW50 83 aa11.44□□□□□ -0.58
Ubp1-201ENSMUST00000009885 Q8K1L6 76 aa11.44□□□□□ -0.58
Ubp1-201ENSMUST00000009885 Gm21798J3QNU5 87 aa11.4□□□□□ -0.58
Ubp1-201ENSMUST00000009885 Limd2Q8BGB5 128 aa11.39□□□□□ -0.59
Ubp1-201ENSMUST00000009885 Defb39Q70KL3 74 aa11.39□□□□□ -0.59
Ubp1-201ENSMUST00000009885 Plac8Q9JI48 112 aa11.37□□□□□ -0.59
Ubp1-201ENSMUST00000009885 Gm10999F6Q4M4 69 aa11.37□□□□□ -0.59
Ubp1-201ENSMUST00000009885 Defb1P56386 69 aa11.36□□□□□ -0.59
Ubp1-201ENSMUST00000009885 1600014C23RikQ9DAX4 101 aa11.36□□□□□ -0.59
Ubp1-201ENSMUST00000009885 6030445D17RikE9Q8F9 148 aa11.34□□□□□ -0.59
Ubp1-201ENSMUST00000009885 Csmd3Q80T79 3707 aa11.31□□□□□ -0.6
Ubp1-201ENSMUST00000009885 Uqcr11Q9CPX8 56 aa11.29□□□□□ -0.6
Ubp1-201ENSMUST00000009885 Znf706Q9D115 76 aaKnown RBP11.29□□□□□ -0.6
Ubp1-201ENSMUST00000009885 Wfdc17Q5SSJ1 76 aa11.29□□□□□ -0.6
Ubp1-201ENSMUST00000009885 Spaca4Q80ZQ0 127 aa11.23□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms