RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Gm11627A6PWP4 55 aa11.79□□□□□ -0.52
Ebf3-204ENSMUST00000169486 HttP42859 3119 aa11.77□□□□□ -0.52
Ebf3-204ENSMUST00000169486 E130208F15RikQ3UPV3 143 aa11.77□□□□□ -0.52
Ebf3-204ENSMUST00000169486 Mki67E9PVX6 3177 aaKnown RBP11.77□□□□□ -0.53
Ebf3-204ENSMUST00000169486 Igkv8-19A0A0G2JFN8 121 aa11.75□□□□□ -0.53
Ebf3-204ENSMUST00000169486 FasnP19096 2504 aaKnown RBP11.75□□□□□ -0.53
Ebf3-204ENSMUST00000169486 Gm16181B0V2H2 73 aa11.75□□□□□ -0.53
Ebf3-204ENSMUST00000169486 Gm3250E9Q1M3 230 aa11.74□□□□□ -0.53
Ebf3-204ENSMUST00000169486 Prune2Q52KR3 3084 aa11.74□□□□□ -0.53
Ebf3-204ENSMUST00000169486 Gm10642Q3TWM1 71 aa11.74□□□□□ -0.53
Ebf3-204ENSMUST00000169486 Gcn1E9PVA8 2671 aaKnown RBP11.72□□□□□ -0.53
Ebf3-204ENSMUST00000169486 Snhg11Q4G0K9 87 aa11.72□□□□□ -0.53
Ebf3-204ENSMUST00000169486 Prrc2cQ3TLH4 2846 aaKnown RBP11.72□□□□□ -0.53
Ebf3-204ENSMUST00000169486 FlnbQ80X90 2602 aaKnown RBP11.72□□□□□ -0.53
Ebf3-204ENSMUST00000169486 Gm5617Q91VN2 117 aa11.71□□□□□ -0.53
Ebf3-204ENSMUST00000169486 Krtap24-1G3X9A2 248 aa11.7□□□□□ -0.54
Ebf3-204ENSMUST00000169486 Usp24B1AY13 2617 aaKnown RBP11.7□□□□□ -0.54
Ebf3-204ENSMUST00000169486 Rpl37aP61514 92 aa11.69□□□□□ -0.54
Ebf3-204ENSMUST00000169486 Jbts17Q8CE72 3214 aa11.69□□□□□ -0.54
Ebf3-204ENSMUST00000169486 Defb50Q6TU36 73 aa11.68□□□□□ -0.54
Ebf3-204ENSMUST00000169486 Psors1c2Q80ZC9 134 aa11.68□□□□□ -0.54
Ebf3-204ENSMUST00000169486 1810062G17RikG3X8Y2 129 aa11.66□□□□□ -0.54
Ebf3-204ENSMUST00000169486 Cdc42se1Q8BHL7 80 aa11.66□□□□□ -0.54
Ebf3-204ENSMUST00000169486 Ankrd17Q99NH0 2603 aaKnown RBP11.64□□□□□ -0.55
Ebf3-204ENSMUST00000169486 Tnrc18Q80WC3 2878 aa11.64□□□□□ -0.55
Ebf3-204ENSMUST00000169486 Gm10999F6Q4M4 69 aa11.63□□□□□ -0.55
Ebf3-204ENSMUST00000169486 Q8BT88 171 aa11.63□□□□□ -0.55
Ebf3-204ENSMUST00000169486 Coa5Q99M07 74 aa11.63□□□□□ -0.55
Ebf3-204ENSMUST00000169486 Phf5aP83870 110 aaKnown RBP11.63□□□□□ -0.55
Ebf3-204ENSMUST00000169486 Limd2Q8BGB5 128 aa11.62□□□□□ -0.55
Ebf3-204ENSMUST00000169486 Gm7173A0A0G2JEB6 3132 aa11.62□□□□□ -0.55
Ebf3-204ENSMUST00000169486 Fn1P11276 2477 aaKnown RBP11.62□□□□□ -0.55
Ebf3-204ENSMUST00000169486 Gm20661K7N787 53 aa11.61□□□□□ -0.55
Ebf3-204ENSMUST00000169486 AI606181Q8C7B9 129 aa11.61□□□□□ -0.55
Ebf3-204ENSMUST00000169486 Krtap11-1E9Q2E9 183 aa11.61□□□□□ -0.55
Ebf3-204ENSMUST00000169486 AY074887Q8R5F9 132 aa11.6□□□□□ -0.55
Ebf3-204ENSMUST00000169486 Gm28374F6SG70 93 aa11.59□□□□□ -0.55
Ebf3-204ENSMUST00000169486 Prol1E9PYQ4 312 aa11.58□□□□□ -0.56
Ebf3-204ENSMUST00000169486 A930002H24RikQ8C8Y3 163 aa11.58□□□□□ -0.56
Ebf3-204ENSMUST00000169486 Fam168bQ80XQ8 194 aa11.58□□□□□ -0.56
Ebf3-204ENSMUST00000169486 Col12a1Q60847 3120 aa11.57□□□□□ -0.56
Ebf3-204ENSMUST00000169486 Notch1Q01705 2531 aa11.56□□□□□ -0.56
Ebf3-204ENSMUST00000169486 AtrQ9JKK8 2635 aa11.55□□□□□ -0.56
Ebf3-204ENSMUST00000169486 Sprr4Q8CGN8 76 aa11.54□□□□□ -0.56
Ebf3-204ENSMUST00000169486 A330070K13RikQ8CA53 115 aa11.54□□□□□ -0.56
Ebf3-204ENSMUST00000169486 Gm10837Q3UTT8 145 aa11.54□□□□□ -0.56
Ebf3-204ENSMUST00000169486 HrnrQ8VHD8 2496 aa11.54□□□□□ -0.56
Ebf3-204ENSMUST00000169486 Lypd5Q9D7Z7 256 aa11.54□□□□□ -0.56
Ebf3-204ENSMUST00000169486 Chd7A2AJK6 2986 aaKnown RBP11.52□□□□□ -0.56
Ebf3-204ENSMUST00000169486 Cdh23Q99PF4 3354 aa11.51□□□□□ -0.57
Ebf3-204ENSMUST00000169486 Znf414Q9DCK4 299 aa11.5□□□□□ -0.57
Ebf3-204ENSMUST00000169486 Sprr1bQ62267 153 aa11.49□□□□□ -0.57
Ebf3-204ENSMUST00000169486 C530025M09RikF6RGA8 229 aa11.49□□□□□ -0.57
Ebf3-204ENSMUST00000169486 Phxr4P15974 95 aa11.49□□□□□ -0.57
Ebf3-204ENSMUST00000169486 Spaca4Q80ZQ0 127 aa11.49□□□□□ -0.57
Ebf3-204ENSMUST00000169486 Defb1P56386 69 aa11.47□□□□□ -0.57
Ebf3-204ENSMUST00000169486 Gm17606F6ZL36 78 aa11.47□□□□□ -0.57
Ebf3-204ENSMUST00000169486 Gpr15lA0A0B4J1N3 78 aa11.47□□□□□ -0.57
Ebf3-204ENSMUST00000169486 Fam229bQ8CF36 80 aa11.46□□□□□ -0.57
Ebf3-204ENSMUST00000169486 Dmbt1Q60997 2085 aa11.46□□□□□ -0.57
Ebf3-204ENSMUST00000169486 Gm12216A0A1W2P827 62 aa11.45□□□□□ -0.58
Ebf3-204ENSMUST00000169486 Cfap54Q8C6S9 3106 aa11.45□□□□□ -0.58
Ebf3-204ENSMUST00000169486 FlnaQ8BTM8 2647 aaKnown RBP11.44□□□□□ -0.58
Ebf3-204ENSMUST00000169486 Gm27235Q3UW50 83 aa11.43□□□□□ -0.58
Ebf3-204ENSMUST00000169486 Nsd1O88491 2588 aaKnown RBP11.42□□□□□ -0.58
Ebf3-204ENSMUST00000169486 Kmt2bO08550 2713 aa11.42□□□□□ -0.58
Ebf3-204ENSMUST00000169486 Q8BGJ3 129 aa11.41□□□□□ -0.58
Ebf3-204ENSMUST00000169486 Akap13E9Q394 2776 aa11.4□□□□□ -0.58
Ebf3-204ENSMUST00000169486 AplnQ9R0R4 77 aa11.39□□□□□ -0.59
Ebf3-204ENSMUST00000169486 4930507D05RikQ8C9C9 103 aa11.38□□□□□ -0.59
Ebf3-204ENSMUST00000169486 Gm11213A0A1B0GR83 88 aa11.38□□□□□ -0.59
Ebf3-204ENSMUST00000169486 Map1aQ9QYR6 2776 aa11.38□□□□□ -0.59
Ebf3-204ENSMUST00000169486 Rev3lQ61493 3122 aa11.36□□□□□ -0.59
Ebf3-204ENSMUST00000169486 Gm7276Q3TYW4 209 aa11.36□□□□□ -0.59
Ebf3-204ENSMUST00000169486 Spata3Q9D9T6 193 aa11.33□□□□□ -0.6
Ebf3-204ENSMUST00000169486 CnbpP53996 178 aaKnown RBP11.33□□□□□ -0.6
Ebf3-204ENSMUST00000169486 Phxr5P08399 672 aa11.31□□□□□ -0.6
Ebf3-204ENSMUST00000169486 Szt2A2A9C3 3431 aa11.31□□□□□ -0.6
Ebf3-204ENSMUST00000169486 Hectd1Q69ZR2 2618 aaKnown RBP11.3□□□□□ -0.6
Ebf3-204ENSMUST00000169486 Chtf8P0CG14 533 aa11.29□□□□□ -0.6
Ebf3-204ENSMUST00000169486 Defb11Q8R2I7 77 aa11.27□□□□□ -0.6
Ebf3-204ENSMUST00000169486 Itpr1P11881 2749 aa11.26□□□□□ -0.61
Ebf3-204ENSMUST00000169486 Myo15bI7HPW8 3033 aa11.26□□□□□ -0.61
Ebf3-204ENSMUST00000169486 Gm3233E9Q2H5 230 aa11.25□□□□□ -0.61
Ebf3-204ENSMUST00000169486 NipblQ6KCD5 2798 aaKnown RBP11.25□□□□□ -0.61
Ebf3-204ENSMUST00000169486 Ash1lQ99MY8 2958 aa11.24□□□□□ -0.61
Ebf3-204ENSMUST00000169486 Uqcr11Q9CPX8 56 aa11.24□□□□□ -0.61
Ebf3-204ENSMUST00000169486 Bod1lE9Q6J5 3032 aa11.23□□□□□ -0.61
Ebf3-204ENSMUST00000169486 Unc80Q8BLN6 3261 aa11.23□□□□□ -0.61
Ebf3-204ENSMUST00000169486 Gm10643Q3URG9 111 aa11.22□□□□□ -0.61
Ebf3-204ENSMUST00000169486 Vps13aQ5H8C4 3166 aa11.21□□□□□ -0.62
Ebf3-204ENSMUST00000169486 Smim29Q8R043 75 aa11.18□□□□□ -0.62
Ebf3-204ENSMUST00000169486 Mast4Q811L6 2618 aa11.18□□□□□ -0.62
Ebf3-204ENSMUST00000169486 Cypt15B1AXS0 87 aa11.18□□□□□ -0.62
Ebf3-204ENSMUST00000169486 Stab1Q8R4Y4 2571 aa11.18□□□□□ -0.62
Ebf3-204ENSMUST00000169486 Anapc11Q9CPX9 84 aa11.18□□□□□ -0.62
Ebf3-204ENSMUST00000169486 Lelp1Q9DAE3 120 aa11.18□□□□□ -0.62
Ebf3-204ENSMUST00000169486 Defb9Q8R2I6 67 aa11.17□□□□□ -0.62
Ebf3-204ENSMUST00000169486 Gm10320E9PW43 113 aa11.17□□□□□ -0.62
Ebf3-204ENSMUST00000169486 Gm9195A0A140LHT4 2805 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 72.4 ms