RNA–Protein interactions for RNA: ENSMUST00000102632.6

Sort1-201, Transcript of Sortilin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Sort1, Length 6,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-201ENSMUST00000102632 A330070K13RikQ8CA53 115 aa11.75□□□□□ -0.53
Sort1-201ENSMUST00000102632 Coa6Q8BGD8 79 aa11.73□□□□□ -0.53
Sort1-201ENSMUST00000102632 3110070M22RikQ9DAQ7 118 aa11.73□□□□□ -0.53
Sort1-201ENSMUST00000102632 Gm19935A0A1B0GSF9 52 aa11.72□□□□□ -0.53
Sort1-201ENSMUST00000102632 Chd8Q09XV5 2582 aaKnown RBP11.72□□□□□ -0.53
Sort1-201ENSMUST00000102632 Hcfc1Q61191 2045 aaKnown RBP11.71□□□□□ -0.54
Sort1-201ENSMUST00000102632 AW011738F6S7Q2 159 aa11.7□□□□□ -0.54
Sort1-201ENSMUST00000102632 Piezo1E2JF22 2547 aa11.69□□□□□ -0.54
Sort1-201ENSMUST00000102632 Gm10337F7DEP7 55 aa11.68□□□□□ -0.54
Sort1-201ENSMUST00000102632 4930518I15RikQ3V2W7 57 aa11.65□□□□□ -0.55
Sort1-201ENSMUST00000102632 Zfp462B1AWL2 2495 aaKnown RBP11.64□□□□□ -0.55
Sort1-201ENSMUST00000102632 PtprqP0C5E4 2300 aa11.62□□□□□ -0.55
Sort1-201ENSMUST00000102632 Sprr4Q8CGN8 76 aa11.61□□□□□ -0.55
Sort1-201ENSMUST00000102632 Piezo2Q8CD54 2822 aa11.6□□□□□ -0.55
Sort1-201ENSMUST00000102632 Krtap15-1Q9QZU5 150 aa11.59□□□□□ -0.55
Sort1-201ENSMUST00000102632 Cypt15B1AXS0 87 aa11.58□□□□□ -0.56
Sort1-201ENSMUST00000102632 Chtf8P0CG14 533 aa11.58□□□□□ -0.56
Sort1-201ENSMUST00000102632 Cdc42se1Q8BHL7 80 aa11.56□□□□□ -0.56
Sort1-201ENSMUST00000102632 Gm9508A0A1W2P7W0 230 aa11.55□□□□□ -0.56
Sort1-201ENSMUST00000102632 Gm26620Q9CY65 116 aa11.53□□□□□ -0.56
Sort1-201ENSMUST00000102632 Sprr1bQ62267 153 aa11.52□□□□□ -0.57
Sort1-201ENSMUST00000102632 Gm36176A0A1W2P8D5 158 aa11.51□□□□□ -0.57
Sort1-201ENSMUST00000102632 TrrapQ80YV3 2565 aaKnown RBP11.5□□□□□ -0.57
Sort1-201ENSMUST00000102632 Gm17349F7BGH6 99 aa11.48□□□□□ -0.57
Sort1-201ENSMUST00000102632 Ptpn13Q64512 2453 aa11.46□□□□□ -0.57
Sort1-201ENSMUST00000102632 Crip3Q6Q6R3 243 aa11.46□□□□□ -0.57
Sort1-201ENSMUST00000102632 AI854703Q8BIN3 203 aa11.46□□□□□ -0.57
Sort1-201ENSMUST00000102632 Lypd5Q9D7Z7 256 aa11.42□□□□□ -0.58
Sort1-201ENSMUST00000102632 Tln1P26039 2541 aaKnown RBP11.41□□□□□ -0.58
Sort1-201ENSMUST00000102632 Psors1c2Q80ZC9 134 aa11.38□□□□□ -0.59
Sort1-201ENSMUST00000102632 Coa5Q99M07 74 aa11.38□□□□□ -0.59
Sort1-201ENSMUST00000102632 Krtap26-1Q9D7N2 215 aa11.38□□□□□ -0.59
Sort1-201ENSMUST00000102632 C530025M09RikF6RGA8 229 aa11.38□□□□□ -0.59
Sort1-201ENSMUST00000102632 Lelp1Q9DAE3 120 aa11.37□□□□□ -0.59
Sort1-201ENSMUST00000102632 A530084C06RikQ3UTW2 186 aa11.36□□□□□ -0.59
Sort1-201ENSMUST00000102632 Fam229aB2KGE5 128 aa11.35□□□□□ -0.59
Sort1-201ENSMUST00000102632 AY074887Q8R5F9 132 aa11.34□□□□□ -0.59
Sort1-201ENSMUST00000102632 UtrnE9Q6R7 3430 aa11.31□□□□□ -0.6
Sort1-201ENSMUST00000102632 CicQ924A2 2510 aa11.31□□□□□ -0.6
Sort1-201ENSMUST00000102632 Gm4491E0CX42 125 aa11.3□□□□□ -0.6
Sort1-201ENSMUST00000102632 Fam104aA2A6P4 185 aa11.3□□□□□ -0.6
Sort1-201ENSMUST00000102632 CriptO70333 101 aa11.29□□□□□ -0.6
Sort1-201ENSMUST00000102632 CnbpP53996 178 aaKnown RBP11.28□□□□□ -0.6
Sort1-201ENSMUST00000102632 2310034C09RikQ9D746 214 aa11.27□□□□□ -0.6
Sort1-201ENSMUST00000102632 Dmbt1Q60997 2085 aa11.27□□□□□ -0.6
Sort1-201ENSMUST00000102632 NbdyA0A0N4SUI7 68 aa11.26□□□□□ -0.61
Sort1-201ENSMUST00000102632 Epg5Q80TA9 2572 aa11.26□□□□□ -0.61
Sort1-201ENSMUST00000102632 Smim29Q8R043 75 aa11.25□□□□□ -0.61
Sort1-201ENSMUST00000102632 Gm11213A0A1B0GR83 88 aa11.24□□□□□ -0.61
Sort1-201ENSMUST00000102632 Gm3880A0A1B0GSB3 72 aa11.23□□□□□ -0.61
Sort1-201ENSMUST00000102632 SetxA2AKX3 2646 aa11.22□□□□□ -0.61
Sort1-201ENSMUST00000102632 Ankrd17Q99NH0 2603 aaKnown RBP11.21□□□□□ -0.62
Sort1-201ENSMUST00000102632 Gm10308Q9CVR5 141 aa11.2□□□□□ -0.62
Sort1-201ENSMUST00000102632 Cep192E9Q4Y4 2514 aaKnown RBP11.2□□□□□ -0.62
Sort1-201ENSMUST00000102632 Camk2n1Q6QWF9 78 aa11.19□□□□□ -0.62
Sort1-201ENSMUST00000102632 Zcchc13Q9D548 170 aa11.19□□□□□ -0.62
Sort1-201ENSMUST00000102632 Jbts17Q8CE72 3214 aa11.18□□□□□ -0.62
Sort1-201ENSMUST00000102632 Gm9507D3Z5T3 223 aa11.18□□□□□ -0.62
Sort1-201ENSMUST00000102632 Eif4ebp3Q80VV3 101 aa11.18□□□□□ -0.62
Sort1-201ENSMUST00000102632 Gm10320E9PW43 113 aa11.17□□□□□ -0.62
Sort1-201ENSMUST00000102632 Gm21798J3QNU5 87 aa11.16□□□□□ -0.62
Sort1-201ENSMUST00000102632 Cypt14J3QPF7 87 aa11.15□□□□□ -0.63
Sort1-201ENSMUST00000102632 Usp9xP70398 2559 aaKnown RBP11.14□□□□□ -0.63
Sort1-201ENSMUST00000102632 Gm7276Q3TYW4 209 aa11.13□□□□□ -0.63
Sort1-201ENSMUST00000102632 Bahcc1Q3UHR0 2643 aa11.11□□□□□ -0.63
Sort1-201ENSMUST00000102632 Krtap16-1A2A5X5 502 aa11.09□□□□□ -0.63
Sort1-201ENSMUST00000102632 Sec61bQ9CQS8 96 aaKnown RBP11.09□□□□□ -0.63
Sort1-201ENSMUST00000102632 6030445D17RikE9Q8F9 148 aa11.08□□□□□ -0.63
Sort1-201ENSMUST00000102632 Gm9955Q8CEJ8 102 aa11.06□□□□□ -0.64
Sort1-201ENSMUST00000102632 Uqcr11Q9CPX8 56 aa11.05□□□□□ -0.64
Sort1-201ENSMUST00000102632 Krtap10-4Q08EG8 221 aa11.04□□□□□ -0.64
Sort1-201ENSMUST00000102632 Gm42715A0A087WP63 3095 aaKnown RBP11.03□□□□□ -0.64
Sort1-201ENSMUST00000102632 Gm10065F6TJM2 114 aa11.02□□□□□ -0.65
Sort1-201ENSMUST00000102632 MtorQ9JLN9 2549 aa11.02□□□□□ -0.65
Sort1-201ENSMUST00000102632 Nsd1O88491 2588 aaKnown RBP10.99□□□□□ -0.65
Sort1-201ENSMUST00000102632 Smr3aQ61900 147 aa10.98□□□□□ -0.65
Sort1-201ENSMUST00000102632 Golgb1E9PVZ8 3238 aa10.96□□□□□ -0.65
Sort1-201ENSMUST00000102632 Setd2E9Q5F9 2537 aa10.93□□□□□ -0.66
Sort1-201ENSMUST00000102632 Usp9yF8VPU6 2556 aa10.92□□□□□ -0.66
Sort1-201ENSMUST00000102632 Krtap10-10A0A1W2P7T6 217 aa10.92□□□□□ -0.66
Sort1-201ENSMUST00000102632 Krtap13O88375 197 aa10.92□□□□□ -0.66
Sort1-201ENSMUST00000102632 Rps28P62858 69 aaKnown RBP10.91□□□□□ -0.66
Sort1-201ENSMUST00000102632 Gm19426M0QWC7 77 aa10.91□□□□□ -0.66
Sort1-201ENSMUST00000102632 Phxr4P15974 95 aa10.91□□□□□ -0.66
Sort1-201ENSMUST00000102632 Gm5767A0A0J9YTU8 78 aa10.86□□□□□ -0.67
Sort1-201ENSMUST00000102632 Abca12E9Q876 2595 aa10.83□□□□□ -0.68
Sort1-201ENSMUST00000102632 Fam229bQ8CF36 80 aa10.82□□□□□ -0.68
Sort1-201ENSMUST00000102632 Unc79Q0KK59 2596 aa10.82□□□□□ -0.68
Sort1-201ENSMUST00000102632 PolqQ8CGS6 2544 aa10.82□□□□□ -0.68
Sort1-201ENSMUST00000102632 Odf3bQ5M8M2 238 aa10.81□□□□□ -0.68
Sort1-201ENSMUST00000102632 Dnah12Q3V0Q1 3086 aa10.8□□□□□ -0.68
Sort1-201ENSMUST00000102632 Lama3Q61789 3330 aa10.79□□□□□ -0.68
Sort1-201ENSMUST00000102632 Usp24B1AY13 2617 aaKnown RBP10.78□□□□□ -0.68
Sort1-201ENSMUST00000102632 Prune2Q52KR3 3084 aa10.74□□□□□ -0.69
Sort1-201ENSMUST00000102632 Zfp292Q9Z2U2 2698 aa10.74□□□□□ -0.69
Sort1-201ENSMUST00000102632 Tnp2P11378 117 aa10.72□□□□□ -0.69
Sort1-201ENSMUST00000102632 Bod1lE9Q6J5 3032 aa10.71□□□□□ -0.7
Sort1-201ENSMUST00000102632 Prr13Q9CQJ5 137 aa10.67□□□□□ -0.7
Sort1-201ENSMUST00000102632 Ep400Q8CHI8 3072 aaKnown RBP10.67□□□□□ -0.7
Sort1-201ENSMUST00000102632 AtrQ9JKK8 2635 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms