RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Gm44965A0A0N4SVR3 59 aa5.66□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Iqcf6G3UWF2 157 aa5.66□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Gm21886J3QJU9 214 aa5.66□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Psmg4P0C7N9 123 aa5.66□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Ubald1Q6P3B2 176 aa5.66□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Cxcl1P12850 96 aa5.66□□□□□ -1.5
Upf3b-201ENSMUST00000076265 SptssbQ925E8 76 aa5.66□□□□□ -1.5
Upf3b-201ENSMUST00000076265 RetnlbQ99P86 105 aa5.66□□□□□ -1.5
Upf3b-201ENSMUST00000076265 1700008P02RikQ9DAJ8 175 aa5.66□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Gm20730A0A075B5J6 119 aa5.65□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Tcl1b3P56842 122 aa5.65□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Ctxnd1A0A1B0GST9 59 aa5.65□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Q8BT88 171 aa5.65□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Fxyd3Q61835 88 aa5.64□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Tenm1Q9WTS4 2731 aa5.64□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Mpv17l2Q8VIK2 200 aa5.64□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Gm36176A0A1W2P8D5 158 aa5.63□□□□□ -1.51
Upf3b-201ENSMUST00000076265 MgpP19788 104 aa5.63□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Gm10845Q3UNY9 185 aa5.63□□□□□ -1.51
Upf3b-201ENSMUST00000076265 EnhoQ8K1D8 76 aa5.63□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Dnal4Q9DCM4 105 aa5.63□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Krtap10-10A0A1W2P7T6 217 aa5.63□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Lyz2P08905 148 aa5.63□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Znrd1Q791N7 123 aa5.63□□□□□ -1.51
Upf3b-201ENSMUST00000076265 4930447F04RikA2AFR2 126 aa5.62□□□□□ -1.51
Upf3b-201ENSMUST00000076265 NipblQ6KCD5 2798 aaKnown RBP5.62□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Igkv1-135A0A0B4J1H7 120 aa5.62□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Timm8bP62077 83 aaKnown RBP5.62□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Trav4-2A0A075B638 110 aa5.61□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Trav9d-1A0A075B699 112 aa5.61□□□□□ -1.51
Upf3b-201ENSMUST00000076265 P06320 134 aa5.61□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Ang2Q64438 145 aa5.61□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Snai3Q9QY31 287 aa5.6□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Hivep3A2A884 2348 aa5.59□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Psors1c2Q80ZC9 134 aa5.59□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Coa5Q99M07 74 aa5.59□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Msrb1Q9JLC3 116 aa5.59□□□□□ -1.51
Upf3b-201ENSMUST00000076265 Gm17727E9Q4V7 109 aa5.58□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Lyz1P17897 148 aa5.58□□□□□ -1.52
Upf3b-201ENSMUST00000076265 PlnP61014 52 aa5.58□□□□□ -1.52
Upf3b-201ENSMUST00000076265 NpbQ8K4P1 119 aa5.58□□□□□ -1.52
Upf3b-201ENSMUST00000076265 AY074887Q8R5F9 132 aa5.58□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Hspg2Q05793 3707 aaKnown RBP5.58□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Srrm2Q8BTI8 2703 aaKnown RBP5.58□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Igkv8-21A0A140T8P7 120 aa5.58□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Igkv8-27A0A0G2JF28 120 aa5.57□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Igkv4-51A0N8I8 119 aa5.57□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Elof1P60003 83 aa5.57□□□□□ -1.52
Upf3b-201ENSMUST00000076265 ApcQ61315 2845 aa5.57□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Dmbt1Q60997 2085 aa5.57□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Ighv2-3A0A075B696 115 aa5.57□□□□□ -1.52
Upf3b-201ENSMUST00000076265 P01837 106 aa5.57□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Gm10490F6VBM2 120 aa5.56□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Gm3443F7CCV5 94 aa5.56□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Defb30Q30KN4 75 aa5.56□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Brwd1Q921C3 2304 aa5.55□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Igkv4-90A0A075B5L3 117 aa5.55□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Trav6d-5A0A075B6B9 112 aa5.55□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Igkv1-110A0A0B4J1I0 119 aa5.55□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Lypd5Q9D7Z7 256 aa5.55□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Ndufb1P0DN34 57 aa5.54□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Mapk1ip1lQ8BH93 242 aa5.54□□□□□ -1.52
Upf3b-201ENSMUST00000076265 PtprqP0C5E4 2300 aa5.54□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Igkv4-79A0A075B5L8 119 aa5.54□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Gm6594J3QM43 95 aa5.54□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Trav9d-3A0A075B695 113 aa5.53□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Gm7137J3QMW1 236 aa5.53□□□□□ -1.52
Upf3b-201ENSMUST00000076265 MsmbO08540 113 aa5.53□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Lynx1P0DP60 116 aa5.53□□□□□ -1.52
Upf3b-201ENSMUST00000076265 TnxbO35452 4006 aa5.53□□□□□ -1.52
Upf3b-201ENSMUST00000076265 Igkv8-16A0A0G2JDG9 121 aa5.52□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Gm43218A0A0G2JGT0 114 aa5.52□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Gm45716A0A1B0GRQ0 93 aa5.52□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Ear10Q923L6 156 aa5.52□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Sorl1O88307 2215 aaKnown RBP5.52□□□□□ -1.53
Upf3b-201ENSMUST00000076265 E130208F15RikQ3UPV3 143 aa5.52□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Gm7138L7N2C3 230 aa5.51□□□□□ -1.53
Upf3b-201ENSMUST00000076265 AngP21570 145 aa5.51□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Pate4Q09098 99 aa5.51□□□□□ -1.53
Upf3b-201ENSMUST00000076265 SpinklQ8CEK3 90 aa5.51□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Gm3238W4VSP7 230 aa5.51□□□□□ -1.53
Upf3b-201ENSMUST00000076265 S100a4P07091 101 aa5.51□□□□□ -1.53
Upf3b-201ENSMUST00000076265 ErhP84089 104 aa5.51□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Igkv4-57A0A0A6YYE7 117 aa5.5□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Klk9Q32M27 251 aa5.5□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Spink14B9EJP9 96 aa5.49□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Spint3Q3UW09 88 aa5.49□□□□□ -1.53
Upf3b-201ENSMUST00000076265 4930442H23RikQ9D5G7 103 aa5.49□□□□□ -1.53
Upf3b-201ENSMUST00000076265 LenepQ9WVB6 61 aa5.49□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Fam229aB2KGE5 128 aa5.49□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Cox6b1P56391 86 aaKnown RBP5.48□□□□□ -1.53
Upf3b-201ENSMUST00000076265 VwfQ8CIZ8 2813 aa5.48□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Gm20532G3UXR8 106 aa5.48□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Mrpl36Q99N90 102 aa5.48□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Igkv6-13A0A0G2JGY3 119 aa5.47□□□□□ -1.53
Upf3b-201ENSMUST00000076265 Sox19Q62249 55 aa5.47□□□□□ -1.53
Upf3b-201ENSMUST00000076265 A930009A15RikG3UYI6 118 aa5.46□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Gm10226O88253 85 aa5.46□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Notch3Q61982 2318 aa5.46□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Igkv1-131A0A140T8M8 120 aa5.46□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 55.1 ms