RNA–Protein interactions for RNA: ENSMUST00000071588.7

Nkx6-3-201, Transcript of Homeobox protein Nkx-6.3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx6-3, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3-201ENSMUST00000071588 Cdc42se1Q8BHL7 80 aa9.24□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Hspg2Q05793 3707 aaKnown RBP9.24□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Notch2O35516 2470 aa9.24□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Stab1Q8R4Y4 2571 aa9.23□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 AI606181Q8C7B9 129 aa9.23□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Gm11011D3Z3L9 86 aa9.22□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Defb42Q8BVB5 75 aa9.22□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 4933415A04RikQ9D443 101 aa9.22□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Lypd5Q9D7Z7 256 aa9.22□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Gm10772F7AIG4 85 aa9.21□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 PolqQ8CGS6 2544 aa9.21□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Gm10197F6QEY5 67 aa9.2□□□□□ -0.94
Nkx6-3-201ENSMUST00000071588 Lyrm9Q3UN90 78 aa9.2□□□□□ -0.94
Nkx6-3-201ENSMUST00000071588 PrlhG3UWC3 86 aa9.2□□□□□ -0.94
Nkx6-3-201ENSMUST00000071588 Pde6gP09174 87 aa9.2□□□□□ -0.94
Nkx6-3-201ENSMUST00000071588 Notch3Q61982 2318 aa9.19□□□□□ -0.94
Nkx6-3-201ENSMUST00000071588 Igkv4-58A0A0G2JGI6 119 aa9.19□□□□□ -0.94
Nkx6-3-201ENSMUST00000071588 Igkv8-34A0A0G2JDU0 121 aa9.18□□□□□ -0.94
Nkx6-3-201ENSMUST00000071588 9530003J23RikQ8BM26 151 aa9.17□□□□□ -0.94
Nkx6-3-201ENSMUST00000071588 Gm10160F6Y577 67 aa9.17□□□□□ -0.94
Nkx6-3-201ENSMUST00000071588 Defb10Q8R2I8 73 aa9.17□□□□□ -0.94
Nkx6-3-201ENSMUST00000071588 Gm16181B0V2H2 73 aa9.16□□□□□ -0.94
Nkx6-3-201ENSMUST00000071588 Wfdc17Q5SSJ1 76 aa9.15□□□□□ -0.94
Nkx6-3-201ENSMUST00000071588 Col6a5A6H584 2640 aa9.15□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Sprr1bQ62267 153 aa9.15□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Sox16Q62247 57 aa9.14□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Igsf10Q3V1M1 2594 aa9.14□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Trav13-2A0A075B649 110 aa9.13□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Chchd7Q8K2Q5 85 aa9.13□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Igkv4-72A0A0B4J1I4 117 aa9.13□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Trav14-1A0A0G2JF94 121 aa9.12□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Nop10Q9CQS2 64 aa9.12□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Cox7bP56393 80 aa9.12□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Gm5617Q91VN2 117 aa9.12□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Srrm2Q8BTI8 2703 aaKnown RBP9.11□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Igkv8-28A0A0G2JE47 121 aa9.11□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Cox7a1P56392 80 aa9.11□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Coa6Q8BGD8 79 aa9.11□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Msrb1Q9JLC3 116 aa9.11□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Hivep3A2A884 2348 aa9.1□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Fam104aA2A6P4 185 aa9.1□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Gm9805F6YK59 57 aa9.1□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Gm10770F7D043 238 aa9.1□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Dad1P61804 113 aa9.1□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Brwd1Q921C3 2304 aa9.09□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 Gm36176A0A1W2P8D5 158 aa9.09□□□□□ -0.95
Nkx6-3-201ENSMUST00000071588 2010109I03RikQ9CQ11 111 aa9.08□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 Gpha2Q925Q5 128 aa9.07□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 Spata3Q9D9T6 193 aa9.07□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 Igkv8-24A0A140T8P5 121 aa9.06□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 Gm7138L7N2C3 230 aa9.06□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 ApcQ61315 2845 aa9.06□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 A330070K13RikQ8CA53 115 aa9.06□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 Gm3238W4VSP7 230 aa9.06□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 9230102O04RikA2ASX7 82 aa9.05□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 Gm43218A0A0G2JGT0 114 aa9.05□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 Prr15lQ8JZM2 100 aa9.05□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 Tomm7Q9D173 55 aa9.05□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 6430550D23RikE9Q1X6 194 aa9.04□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 Gm10518F6UQQ9 182 aa9.04□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 1700042G07RikB1AUF7 90 aa9.03□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 Coa5Q99M07 74 aa9.03□□□□□ -0.96
Nkx6-3-201ENSMUST00000071588 Igkv1-88A0A140T8N1 120 aa9.01□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Gm7257D3YX25 99 aa9.01□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Atox1O08997 68 aaKnown RBP9.01□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Wfdc12Q9JHY3 85 aa9.01□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Gm7137J3QMW1 236 aa8.99□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Gm17509Q9CZ61 145 aa8.99□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Tcl1b5P56845 121 aa8.99□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Klk9Q32M27 251 aa8.99□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Reg3dQ9QUS9 175 aa8.99□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Igkv8-19A0A0G2JFN8 121 aa8.98□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Sprr2jO70561 109 aa8.97□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Pla2g1bQ9Z0Y2 146 aa8.97□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Igkv8-16A0A0G2JDG9 121 aa8.97□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Spink4O35679 86 aa8.97□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 AY074887Q8R5F9 132 aa8.97□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Gm26620Q9CY65 116 aa8.97□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Igkv3-2A0A075B5P0 119 aa8.96□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Sfta2E9PXB6 77 aa8.96□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Cmc4Q61908 68 aa8.96□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Defb12Q8K4N3 78 aa8.96□□□□□ -0.97
Nkx6-3-201ENSMUST00000071588 Defb37Q7TMD2 62 aa8.96□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 Elof1P60003 83 aa8.95□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 Psors1c2Q80ZC9 134 aa8.94□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 Phxr4P15974 95 aa8.93□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 Gm10643Q3URG9 111 aa8.93□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 VwfQ8CIZ8 2813 aa8.93□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 Prh1P05142 261 aa8.93□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 PtprqP0C5E4 2300 aa8.92□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 Leap2Q91V13 76 aa8.92□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 D730001G18RikA0A087WQU7 115 aa8.9□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 Igkv4-92A0A0B4J1I2 117 aa8.9□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 Igkv4-54A0A0G2JES9 117 aa8.9□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 Igkv4-61A0A0G2JH00 117 aa8.9□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 Ube2bP63147 152 aa8.9□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 C130032M10RikQ8C888 123 aa8.9□□□□□ -0.98
Nkx6-3-201ENSMUST00000071588 FcgbpE9Q0B5 2583 aa8.88□□□□□ -0.99
Nkx6-3-201ENSMUST00000071588 Gm10837Q3UTT8 145 aa8.88□□□□□ -0.99
Nkx6-3-201ENSMUST00000071588 Phxr5P08399 672 aa8.87□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 60.5 ms