RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 H2al1mQ9DAD9 105 aa12.01□□□□□ -0.49
Sdc3-201ENSMUST00000070478 Gm21886J3QJU9 214 aa12□□□□□ -0.49
Sdc3-201ENSMUST00000070478 Itpr1P11881 2749 aa11.99□□□□□ -0.49
Sdc3-201ENSMUST00000070478 AI606181Q8C7B9 129 aa11.99□□□□□ -0.49
Sdc3-201ENSMUST00000070478 Usp34Q6ZQ93 3582 aa11.98□□□□□ -0.49
Sdc3-201ENSMUST00000070478 1810062G17RikG3X8Y2 129 aa11.98□□□□□ -0.49
Sdc3-201ENSMUST00000070478 HttP42859 3119 aa11.98□□□□□ -0.49
Sdc3-201ENSMUST00000070478 Lypd5Q9D7Z7 256 aa11.98□□□□□ -0.49
Sdc3-201ENSMUST00000070478 Col12a1Q60847 3120 aa11.97□□□□□ -0.49
Sdc3-201ENSMUST00000070478 Igkv8-27A0A0G2JF28 120 aa11.97□□□□□ -0.49
Sdc3-201ENSMUST00000070478 Gm3233E9Q2H5 230 aa11.96□□□□□ -0.49
Sdc3-201ENSMUST00000070478 Gm10570F6VB42 170 aa11.96□□□□□ -0.49
Sdc3-201ENSMUST00000070478 Prol1E9PYQ4 312 aa11.95□□□□□ -0.5
Sdc3-201ENSMUST00000070478 Coa6Q8BGD8 79 aa11.95□□□□□ -0.5
Sdc3-201ENSMUST00000070478 SnurfQ9WU12 71 aa11.95□□□□□ -0.5
Sdc3-201ENSMUST00000070478 AplnQ9R0R4 77 aa11.94□□□□□ -0.5
Sdc3-201ENSMUST00000070478 Fn1P11276 2477 aaKnown RBP11.93□□□□□ -0.5
Sdc3-201ENSMUST00000070478 Gm44790A0A0N4SV91 103 aa11.93□□□□□ -0.5
Sdc3-201ENSMUST00000070478 Prrc2cQ3TLH4 2846 aaKnown RBP11.93□□□□□ -0.5
Sdc3-201ENSMUST00000070478 Ighv2-2A0A075B5P8 116 aa11.91□□□□□ -0.5
Sdc3-201ENSMUST00000070478 P01821 116 aa11.91□□□□□ -0.5
Sdc3-201ENSMUST00000070478 Krtap11-1E9Q2E9 183 aa11.91□□□□□ -0.5
Sdc3-201ENSMUST00000070478 H2al1kJ3QP08 105 aa11.9□□□□□ -0.5
Sdc3-201ENSMUST00000070478 Notch1Q01705 2531 aa11.89□□□□□ -0.51
Sdc3-201ENSMUST00000070478 Gpr15lA0A0B4J1N3 78 aa11.89□□□□□ -0.51
Sdc3-201ENSMUST00000070478 9230102O04RikA2ASX7 82 aa11.89□□□□□ -0.51
Sdc3-201ENSMUST00000070478 Gm10770F7D043 238 aa11.88□□□□□ -0.51
Sdc3-201ENSMUST00000070478 6430550D23RikE9Q1X6 194 aa11.88□□□□□ -0.51
Sdc3-201ENSMUST00000070478 Myo15bI7HPW8 3033 aa11.88□□□□□ -0.51
Sdc3-201ENSMUST00000070478 AI854703Q8BIN3 203 aa11.88□□□□□ -0.51
Sdc3-201ENSMUST00000070478 Sprr4Q8CGN8 76 aa11.87□□□□□ -0.51
Sdc3-201ENSMUST00000070478 4930518I15RikQ3V2W7 57 aa11.86□□□□□ -0.51
Sdc3-201ENSMUST00000070478 Fam168bQ80XQ8 194 aa11.85□□□□□ -0.51
Sdc3-201ENSMUST00000070478 Gm10337F7DEP7 55 aa11.84□□□□□ -0.51
Sdc3-201ENSMUST00000070478 Spaca4Q80ZQ0 127 aa11.84□□□□□ -0.51
Sdc3-201ENSMUST00000070478 Nsd1O88491 2588 aaKnown RBP11.84□□□□□ -0.51
Sdc3-201ENSMUST00000070478 Gm27235Q3UW50 83 aa11.84□□□□□ -0.51
Sdc3-201ENSMUST00000070478 Gm10160F6Y577 67 aa11.83□□□□□ -0.52
Sdc3-201ENSMUST00000070478 Map1aQ9QYR6 2776 aa11.83□□□□□ -0.52
Sdc3-201ENSMUST00000070478 Gm5617Q91VN2 117 aa11.83□□□□□ -0.52
Sdc3-201ENSMUST00000070478 Lelp1Q9DAE3 120 aa11.82□□□□□ -0.52
Sdc3-201ENSMUST00000070478 RetnlbQ99P86 105 aa11.81□□□□□ -0.52
Sdc3-201ENSMUST00000070478 Defb50Q6TU36 73 aa11.8□□□□□ -0.52
Sdc3-201ENSMUST00000070478 Bean1Q9EQG5 255 aa11.8□□□□□ -0.52
Sdc3-201ENSMUST00000070478 Q8BT88 171 aa11.8□□□□□ -0.52
Sdc3-201ENSMUST00000070478 Cfap54Q8C6S9 3106 aa11.79□□□□□ -0.52
Sdc3-201ENSMUST00000070478 Akap13E9Q394 2776 aa11.78□□□□□ -0.52
Sdc3-201ENSMUST00000070478 AW011738F6S7Q2 159 aa11.78□□□□□ -0.52
Sdc3-201ENSMUST00000070478 AY074887Q8R5F9 132 aa11.78□□□□□ -0.52
Sdc3-201ENSMUST00000070478 Sprr1bQ62267 153 aa11.76□□□□□ -0.53
Sdc3-201ENSMUST00000070478 Stab1Q8R4Y4 2571 aa11.76□□□□□ -0.53
Sdc3-201ENSMUST00000070478 Eif4ebp3Q80VV3 101 aa11.76□□□□□ -0.53
Sdc3-201ENSMUST00000070478 Rev3lQ61493 3122 aa11.75□□□□□ -0.53
Sdc3-201ENSMUST00000070478 Gm10197F6QEY5 67 aa11.74□□□□□ -0.53
Sdc3-201ENSMUST00000070478 Gm9195A0A140LHT4 2805 aa11.74□□□□□ -0.53
Sdc3-201ENSMUST00000070478 Gm10999F6Q4M4 69 aa11.73□□□□□ -0.53
Sdc3-201ENSMUST00000070478 Mast4Q811L6 2618 aa11.73□□□□□ -0.53
Sdc3-201ENSMUST00000070478 Rpl37aP61514 92 aa11.73□□□□□ -0.53
Sdc3-201ENSMUST00000070478 Gm17606F6ZL36 78 aa11.72□□□□□ -0.53
Sdc3-201ENSMUST00000070478 Fbn2Q61555 2907 aa11.72□□□□□ -0.53
Sdc3-201ENSMUST00000070478 Gm11565A2A4M7 156 aa11.71□□□□□ -0.53
Sdc3-201ENSMUST00000070478 Gm10308Q9CVR5 141 aa11.7□□□□□ -0.54
Sdc3-201ENSMUST00000070478 Dmxl1Q6PNC0 3013 aa11.7□□□□□ -0.54
Sdc3-201ENSMUST00000070478 Krtap16-1A2A5X5 502 aa11.69□□□□□ -0.54
Sdc3-201ENSMUST00000070478 Gm17689B3GLJ4 109 aa11.68□□□□□ -0.54
Sdc3-201ENSMUST00000070478 A930002H24RikQ8C8Y3 163 aa11.67□□□□□ -0.54
Sdc3-201ENSMUST00000070478 Dmbt1Q60997 2085 aa11.67□□□□□ -0.54
Sdc3-201ENSMUST00000070478 Bod1lE9Q6J5 3032 aa11.66□□□□□ -0.54
Sdc3-201ENSMUST00000070478 C530025M09RikF6RGA8 229 aa11.65□□□□□ -0.54
Sdc3-201ENSMUST00000070478 Ash1lQ99MY8 2958 aa11.64□□□□□ -0.55
Sdc3-201ENSMUST00000070478 NipblQ6KCD5 2798 aaKnown RBP11.62□□□□□ -0.55
Sdc3-201ENSMUST00000070478 Gm7138L7N2C3 230 aa11.62□□□□□ -0.55
Sdc3-201ENSMUST00000070478 Gm3238W4VSP7 230 aa11.62□□□□□ -0.55
Sdc3-201ENSMUST00000070478 Spint4Q9D263 159 aa11.61□□□□□ -0.55
Sdc3-201ENSMUST00000070478 KalrnA2CG49 2964 aa11.61□□□□□ -0.55
Sdc3-201ENSMUST00000070478 Plac8Q9JI48 112 aa11.6□□□□□ -0.55
Sdc3-201ENSMUST00000070478 Cdh23Q99PF4 3354 aa11.6□□□□□ -0.55
Sdc3-201ENSMUST00000070478 Defb9Q8R2I6 67 aa11.59□□□□□ -0.55
Sdc3-201ENSMUST00000070478 4930507D05RikQ8C9C9 103 aa11.58□□□□□ -0.56
Sdc3-201ENSMUST00000070478 Gm7276Q3TYW4 209 aa11.56□□□□□ -0.56
Sdc3-201ENSMUST00000070478 MgaA2AWL7 3003 aaKnown RBP11.56□□□□□ -0.56
Sdc3-201ENSMUST00000070478 OxtP35454 125 aa11.56□□□□□ -0.56
Sdc3-201ENSMUST00000070478 Kmt2bO08550 2713 aa11.55□□□□□ -0.56
Sdc3-201ENSMUST00000070478 Ranbp2Q9ERU9 3053 aaKnown RBP11.55□□□□□ -0.56
Sdc3-201ENSMUST00000070478 Vps13aQ5H8C4 3166 aa11.54□□□□□ -0.56
Sdc3-201ENSMUST00000070478 Chd6A3KFM7 2711 aa11.54□□□□□ -0.56
Sdc3-201ENSMUST00000070478 Gm7137J3QMW1 236 aa11.53□□□□□ -0.56
Sdc3-201ENSMUST00000070478 CnbpP53996 178 aaKnown RBP11.53□□□□□ -0.56
Sdc3-201ENSMUST00000070478 Q8BGJ3 129 aa11.53□□□□□ -0.56
Sdc3-201ENSMUST00000070478 AtmQ62388 3066 aa11.52□□□□□ -0.56
Sdc3-201ENSMUST00000070478 7530416G11RikJ3QJX6 159 aa11.52□□□□□ -0.57
Sdc3-201ENSMUST00000070478 Ubr5Q80TP3 2792 aa11.51□□□□□ -0.57
Sdc3-201ENSMUST00000070478 A530084C06RikQ3UTW2 186 aa11.51□□□□□ -0.57
Sdc3-201ENSMUST00000070478 HrnrQ8VHD8 2496 aa11.5□□□□□ -0.57
Sdc3-201ENSMUST00000070478 Limd2Q8BGB5 128 aa11.5□□□□□ -0.57
Sdc3-201ENSMUST00000070478 Igsf10Q3V1M1 2594 aa11.5□□□□□ -0.57
Sdc3-201ENSMUST00000070478 Itpr3P70227 2670 aa11.49□□□□□ -0.57
Sdc3-201ENSMUST00000070478 A330070K13RikQ8CA53 115 aa11.47□□□□□ -0.57
Sdc3-201ENSMUST00000070478 Rps28P62858 69 aaKnown RBP11.47□□□□□ -0.57
Sdc3-201ENSMUST00000070478 Anapc11Q9CPX9 84 aa11.46□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 335.6 ms