RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Spaca4Q80ZQ0 127 aa11.74□□□□□ -0.53
Usp48-201ENSMUST00000055131 Krtap16-1A2A5X5 502 aa11.73□□□□□ -0.53
Usp48-201ENSMUST00000055131 Gm10837Q3UTT8 145 aa11.73□□□□□ -0.53
Usp48-201ENSMUST00000055131 Krtap26-1Q9D7N2 215 aa11.73□□□□□ -0.53
Usp48-201ENSMUST00000055131 Gm12216A0A1W2P827 62 aa11.72□□□□□ -0.53
Usp48-201ENSMUST00000055131 Prune2Q52KR3 3084 aa11.72□□□□□ -0.53
Usp48-201ENSMUST00000055131 Gm17689B3GLJ4 109 aa11.71□□□□□ -0.53
Usp48-201ENSMUST00000055131 PtprqP0C5E4 2300 aa11.71□□□□□ -0.54
Usp48-201ENSMUST00000055131 Fam168bQ80XQ8 194 aa11.7□□□□□ -0.54
Usp48-201ENSMUST00000055131 Gm5617Q91VN2 117 aa11.7□□□□□ -0.54
Usp48-201ENSMUST00000055131 RetnlbQ99P86 105 aa11.69□□□□□ -0.54
Usp48-201ENSMUST00000055131 Defb1P56386 69 aa11.69□□□□□ -0.54
Usp48-201ENSMUST00000055131 Usp34Q6ZQ93 3582 aa11.69□□□□□ -0.54
Usp48-201ENSMUST00000055131 Myo18bE9PV66 2605 aa11.68□□□□□ -0.54
Usp48-201ENSMUST00000055131 Prol1E9PYQ4 312 aa11.68□□□□□ -0.54
Usp48-201ENSMUST00000055131 Q8BT88 171 aa11.68□□□□□ -0.54
Usp48-201ENSMUST00000055131 FlnbQ80X90 2602 aaKnown RBP11.68□□□□□ -0.54
Usp48-201ENSMUST00000055131 CicQ924A2 2510 aa11.66□□□□□ -0.54
Usp48-201ENSMUST00000055131 Gm20661K7N787 53 aa11.66□□□□□ -0.54
Usp48-201ENSMUST00000055131 PolqQ8CGS6 2544 aa11.66□□□□□ -0.54
Usp48-201ENSMUST00000055131 Krtap11-1E9Q2E9 183 aa11.65□□□□□ -0.54
Usp48-201ENSMUST00000055131 Gm10308Q9CVR5 141 aa11.65□□□□□ -0.54
Usp48-201ENSMUST00000055131 Psors1c2Q80ZC9 134 aa11.64□□□□□ -0.55
Usp48-201ENSMUST00000055131 CenpfE9Q3P4 2997 aaKnown RBP11.63□□□□□ -0.55
Usp48-201ENSMUST00000055131 Rps28P62858 69 aaKnown RBP11.63□□□□□ -0.55
Usp48-201ENSMUST00000055131 Gm27235Q3UW50 83 aa11.63□□□□□ -0.55
Usp48-201ENSMUST00000055131 Limd2Q8BGB5 128 aa11.61□□□□□ -0.55
Usp48-201ENSMUST00000055131 Jbts17Q8CE72 3214 aa11.61□□□□□ -0.55
Usp48-201ENSMUST00000055131 7530416G11RikJ3QJX6 159 aa11.61□□□□□ -0.55
Usp48-201ENSMUST00000055131 Gm3233E9Q2H5 230 aa11.6□□□□□ -0.55
Usp48-201ENSMUST00000055131 Spata3Q9D9T6 193 aa11.6□□□□□ -0.55
Usp48-201ENSMUST00000055131 4930507D05RikQ8C9C9 103 aa11.59□□□□□ -0.55
Usp48-201ENSMUST00000055131 Prr13Q9CQJ5 137 aa11.59□□□□□ -0.55
Usp48-201ENSMUST00000055131 Hcfc1Q61191 2045 aaKnown RBP11.59□□□□□ -0.55
Usp48-201ENSMUST00000055131 Eif4ebp3Q80VV3 101 aa11.59□□□□□ -0.55
Usp48-201ENSMUST00000055131 AplnQ9R0R4 77 aa11.57□□□□□ -0.56
Usp48-201ENSMUST00000055131 Q8BGJ3 129 aa11.55□□□□□ -0.56
Usp48-201ENSMUST00000055131 Coa5Q99M07 74 aa11.55□□□□□ -0.56
Usp48-201ENSMUST00000055131 Sprr4Q8CGN8 76 aa11.53□□□□□ -0.56
Usp48-201ENSMUST00000055131 Gm7173A0A0G2JEB6 3132 aa11.52□□□□□ -0.57
Usp48-201ENSMUST00000055131 Usp9yF8VPU6 2556 aa11.51□□□□□ -0.57
Usp48-201ENSMUST00000055131 1810062G17RikG3X8Y2 129 aa11.51□□□□□ -0.57
Usp48-201ENSMUST00000055131 AY074887Q8R5F9 132 aa11.49□□□□□ -0.57
Usp48-201ENSMUST00000055131 Lypd5Q9D7Z7 256 aa11.44□□□□□ -0.58
Usp48-201ENSMUST00000055131 Ankrd11E9Q4F7 2643 aa11.44□□□□□ -0.58
Usp48-201ENSMUST00000055131 Col12a1Q60847 3120 aa11.43□□□□□ -0.58
Usp48-201ENSMUST00000055131 Ankrd17Q99NH0 2603 aaKnown RBP11.43□□□□□ -0.58
Usp48-201ENSMUST00000055131 Cdc42se1Q8BHL7 80 aa11.43□□□□□ -0.58
Usp48-201ENSMUST00000055131 Phxr5P08399 672 aa11.41□□□□□ -0.58
Usp48-201ENSMUST00000055131 Mki67E9PVX6 3177 aaKnown RBP11.41□□□□□ -0.58
Usp48-201ENSMUST00000055131 A330070K13RikQ8CA53 115 aa11.4□□□□□ -0.58
Usp48-201ENSMUST00000055131 C530025M09RikF6RGA8 229 aa11.4□□□□□ -0.58
Usp48-201ENSMUST00000055131 Sprr1bQ62267 153 aa11.4□□□□□ -0.59
Usp48-201ENSMUST00000055131 Cep192E9Q4Y4 2514 aaKnown RBP11.39□□□□□ -0.59
Usp48-201ENSMUST00000055131 Mp68P56379 58 aa11.39□□□□□ -0.59
Usp48-201ENSMUST00000055131 AtrQ9JKK8 2635 aa11.39□□□□□ -0.59
Usp48-201ENSMUST00000055131 Hectd1Q69ZR2 2618 aaKnown RBP11.35□□□□□ -0.59
Usp48-201ENSMUST00000055131 Defb9Q8R2I6 67 aa11.34□□□□□ -0.59
Usp48-201ENSMUST00000055131 Anapc11Q9CPX9 84 aa11.33□□□□□ -0.6
Usp48-201ENSMUST00000055131 HttP42859 3119 aa11.32□□□□□ -0.6
Usp48-201ENSMUST00000055131 Phxr4P15974 95 aa11.32□□□□□ -0.6
Usp48-201ENSMUST00000055131 Gm7276Q3TYW4 209 aa11.3□□□□□ -0.6
Usp48-201ENSMUST00000055131 Plac8Q9JI48 112 aa11.29□□□□□ -0.6
Usp48-201ENSMUST00000055131 Cypt15B1AXS0 87 aa11.28□□□□□ -0.6
Usp48-201ENSMUST00000055131 Lelp1Q9DAE3 120 aa11.27□□□□□ -0.61
Usp48-201ENSMUST00000055131 Rnase13Q5GAM7 153 aa11.26□□□□□ -0.61
Usp48-201ENSMUST00000055131 Nbeal1E9PYP2 2688 aa11.25□□□□□ -0.61
Usp48-201ENSMUST00000055131 Gm7138L7N2C3 230 aa11.23□□□□□ -0.61
Usp48-201ENSMUST00000055131 Gm3238W4VSP7 230 aa11.23□□□□□ -0.61
Usp48-201ENSMUST00000055131 Gm7137J3QMW1 236 aa11.23□□□□□ -0.61
Usp48-201ENSMUST00000055131 AW011738F6S7Q2 159 aa11.22□□□□□ -0.61
Usp48-201ENSMUST00000055131 Uqcr11Q9CPX8 56 aa11.21□□□□□ -0.61
Usp48-201ENSMUST00000055131 Itpr1P11881 2749 aa11.21□□□□□ -0.62
Usp48-201ENSMUST00000055131 Rev3lQ61493 3122 aa11.21□□□□□ -0.62
Usp48-201ENSMUST00000055131 Myo15bI7HPW8 3033 aa11.21□□□□□ -0.62
Usp48-201ENSMUST00000055131 FasnP19096 2504 aaKnown RBP11.2□□□□□ -0.62
Usp48-201ENSMUST00000055131 Fam229bQ8CF36 80 aa11.19□□□□□ -0.62
Usp48-201ENSMUST00000055131 Chtf8P0CG14 533 aa11.16□□□□□ -0.62
Usp48-201ENSMUST00000055131 Usp24B1AY13 2617 aaKnown RBP11.16□□□□□ -0.62
Usp48-201ENSMUST00000055131 FlnaQ8BTM8 2647 aaKnown RBP11.16□□□□□ -0.62
Usp48-201ENSMUST00000055131 Bod1lE9Q6J5 3032 aa11.15□□□□□ -0.62
Usp48-201ENSMUST00000055131 Cdh23Q99PF4 3354 aa11.15□□□□□ -0.63
Usp48-201ENSMUST00000055131 Fam104aA2A6P4 185 aa11.13□□□□□ -0.63
Usp48-201ENSMUST00000055131 Chd7A2AJK6 2986 aaKnown RBP11.13□□□□□ -0.63
Usp48-201ENSMUST00000055131 Gm11213A0A1B0GR83 88 aa11.11□□□□□ -0.63
Usp48-201ENSMUST00000055131 Smim29Q8R043 75 aa11.1□□□□□ -0.63
Usp48-201ENSMUST00000055131 CnbpP53996 178 aaKnown RBP11.1□□□□□ -0.63
Usp48-201ENSMUST00000055131 Zcchc13Q9D548 170 aa11.07□□□□□ -0.64
Usp48-201ENSMUST00000055131 Gm26620Q9CY65 116 aa11.06□□□□□ -0.64
Usp48-201ENSMUST00000055131 Gcn1E9PVA8 2671 aaKnown RBP11.05□□□□□ -0.64
Usp48-201ENSMUST00000055131 Tnrc18Q80WC3 2878 aa11.04□□□□□ -0.64
Usp48-201ENSMUST00000055131 OxtP35454 125 aa11.03□□□□□ -0.64
Usp48-201ENSMUST00000055131 2310034C09RikQ9D746 214 aa11.02□□□□□ -0.65
Usp48-201ENSMUST00000055131 Gm10643Q3URG9 111 aa11□□□□□ -0.65
Usp48-201ENSMUST00000055131 Nsd1O88491 2588 aaKnown RBP10.99□□□□□ -0.65
Usp48-201ENSMUST00000055131 Gm21798J3QNU5 87 aa10.99□□□□□ -0.65
Usp48-201ENSMUST00000055131 MgaA2AWL7 3003 aaKnown RBP10.98□□□□□ -0.65
Usp48-201ENSMUST00000055131 AtmQ62388 3066 aa10.97□□□□□ -0.65
Usp48-201ENSMUST00000055131 Cypt14J3QPF7 87 aa10.95□□□□□ -0.66
Usp48-201ENSMUST00000055131 KalrnA2CG49 2964 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms