RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Gm17606F6ZL36 78 aa10.32□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Gm20661K7N787 53 aa10.32□□□□□ -0.76
Col2a1-201ENSMUST00000023123 AI606181Q8C7B9 129 aa10.32□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Gm12216A0A1W2P827 62 aa10.31□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Coa5Q99M07 74 aa10.31□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Prol1E9PYQ4 312 aa10.31□□□□□ -0.76
Col2a1-201ENSMUST00000023123 A930002H24RikQ8C8Y3 163 aa10.3□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Gm10999F6Q4M4 69 aa10.29□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Snhg11Q4G0K9 87 aa10.29□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Defb50Q6TU36 73 aa10.29□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Unc79Q0KK59 2596 aa10.26□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Gm10837Q3UTT8 145 aa10.26□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Usp34Q6ZQ93 3582 aa10.25□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Myo18bE9PV66 2605 aa10.25□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Phxr4P15974 95 aa10.24□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Rpl37aP61514 92 aa10.24□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Q8BT88 171 aa10.24□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Epg5Q80TA9 2572 aa10.23□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Prune2Q52KR3 3084 aa10.23□□□□□ -0.77
Col2a1-201ENSMUST00000023123 1810062G17RikG3X8Y2 129 aa10.23□□□□□ -0.77
Col2a1-201ENSMUST00000023123 4930507D05RikQ8C9C9 103 aa10.23□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Gm5617Q91VN2 117 aa10.22□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Cep192E9Q4Y4 2514 aaKnown RBP10.22□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Phf5aP83870 110 aaKnown RBP10.21□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Krtap24-1G3X9A2 248 aa10.21□□□□□ -0.77
Col2a1-201ENSMUST00000023123 AY074887Q8R5F9 132 aa10.21□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Znf414Q9DCK4 299 aa10.21□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Gm7173A0A0G2JEB6 3132 aa10.2□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Gm10643Q3URG9 111 aa10.18□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Gm27235Q3UW50 83 aa10.17□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Sprr1bQ62267 153 aa10.17□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Sprr4Q8CGN8 76 aa10.16□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Gpr15lA0A0B4J1N3 78 aa10.13□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Krtap11-1E9Q2E9 183 aa10.13□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Mki67E9PVX6 3177 aaKnown RBP10.13□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Usp9yF8VPU6 2556 aa10.12□□□□□ -0.79
Col2a1-201ENSMUST00000023123 HttP42859 3119 aa10.12□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Tnrc18Q80WC3 2878 aa10.11□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Nbeal1E9PYP2 2688 aa10.11□□□□□ -0.79
Col2a1-201ENSMUST00000023123 FlnbQ80X90 2602 aaKnown RBP10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Uqcr11Q9CPX8 56 aa10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Q8BGJ3 129 aa10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Gm7276Q3TYW4 209 aa10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Fam168bQ80XQ8 194 aa10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Spaca4Q80ZQ0 127 aa10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 AplnQ9R0R4 77 aa10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 A330070K13RikQ8CA53 115 aa10.09□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Mp68P56379 58 aa10.07□□□□□ -0.8
Col2a1-201ENSMUST00000023123 Defb1P56386 69 aa10.06□□□□□ -0.8
Col2a1-201ENSMUST00000023123 Col12a1Q60847 3120 aa10.04□□□□□ -0.8
Col2a1-201ENSMUST00000023123 Myo15bI7HPW8 3033 aa10.04□□□□□ -0.8
Col2a1-201ENSMUST00000023123 C530025M09RikF6RGA8 229 aa10.03□□□□□ -0.8
Col2a1-201ENSMUST00000023123 Lypd5Q9D7Z7 256 aa10.03□□□□□ -0.8
Col2a1-201ENSMUST00000023123 Gm11213A0A1B0GR83 88 aa10.02□□□□□ -0.81
Col2a1-201ENSMUST00000023123 Chd7A2AJK6 2986 aaKnown RBP10.01□□□□□ -0.81
Col2a1-201ENSMUST00000023123 Ankrd11E9Q4F7 2643 aa10□□□□□ -0.81
Col2a1-201ENSMUST00000023123 Jbts17Q8CE72 3214 aa10□□□□□ -0.81
Col2a1-201ENSMUST00000023123 Itpr1P11881 2749 aa9.97□□□□□ -0.81
Col2a1-201ENSMUST00000023123 CnbpP53996 178 aaKnown RBP9.96□□□□□ -0.81
Col2a1-201ENSMUST00000023123 Fam229bQ8CF36 80 aa9.96□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Gm3250E9Q1M3 230 aa9.95□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Chtf8P0CG14 533 aa9.95□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Phxr5P08399 672 aa9.94□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Defb11Q8R2I7 77 aa9.93□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Hectd1Q69ZR2 2618 aaKnown RBP9.92□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Cypt15B1AXS0 87 aa9.91□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Ankrd17Q99NH0 2603 aaKnown RBP9.91□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Spata3Q9D9T6 193 aa9.9□□□□□ -0.83
Col2a1-201ENSMUST00000023123 CicQ924A2 2510 aa9.89□□□□□ -0.83
Col2a1-201ENSMUST00000023123 Rev3lQ61493 3122 aa9.88□□□□□ -0.83
Col2a1-201ENSMUST00000023123 AW011738F6S7Q2 159 aa9.86□□□□□ -0.83
Col2a1-201ENSMUST00000023123 Fam104aA2A6P4 185 aa9.83□□□□□ -0.84
Col2a1-201ENSMUST00000023123 Defb9Q8R2I6 67 aa9.81□□□□□ -0.84
Col2a1-201ENSMUST00000023123 AtrQ9JKK8 2635 aa9.79□□□□□ -0.84
Col2a1-201ENSMUST00000023123 Cdh23Q99PF4 3354 aa9.78□□□□□ -0.84
Col2a1-201ENSMUST00000023123 FasnP19096 2504 aaKnown RBP9.77□□□□□ -0.84
Col2a1-201ENSMUST00000023123 RetnlbQ99P86 105 aa9.77□□□□□ -0.85
Col2a1-201ENSMUST00000023123 Dmbt1Q60997 2085 aa9.75□□□□□ -0.85
Col2a1-201ENSMUST00000023123 Zcchc13Q9D548 170 aa9.74□□□□□ -0.85
Col2a1-201ENSMUST00000023123 Gm21798J3QNU5 87 aa9.74□□□□□ -0.85
Col2a1-201ENSMUST00000023123 Rnase13Q5GAM7 153 aa9.74□□□□□ -0.85
Col2a1-201ENSMUST00000023123 FlnaQ8BTM8 2647 aaKnown RBP9.73□□□□□ -0.85
Col2a1-201ENSMUST00000023123 2310034C09RikQ9D746 214 aa9.71□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Fn1P11276 2477 aaKnown RBP9.71□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Anapc11Q9CPX9 84 aa9.7□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Fbn2Q61555 2907 aa9.7□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Gcn1E9PVA8 2671 aaKnown RBP9.69□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Gm26620Q9CY65 116 aa9.69□□□□□ -0.86
Col2a1-201ENSMUST00000023123 KalrnA2CG49 2964 aa9.68□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Gm10320E9PW43 113 aa9.68□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Dmxl1Q6PNC0 3013 aa9.67□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Smim29Q8R043 75 aa9.67□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Usp24B1AY13 2617 aaKnown RBP9.66□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Cystm1Q8K353 104 aa9.65□□□□□ -0.86
Col2a1-201ENSMUST00000023123 MgaA2AWL7 3003 aaKnown RBP9.63□□□□□ -0.87
Col2a1-201ENSMUST00000023123 Cypt14J3QPF7 87 aa9.63□□□□□ -0.87
Col2a1-201ENSMUST00000023123 AtmQ62388 3066 aa9.63□□□□□ -0.87
Col2a1-201ENSMUST00000023123 Lelp1Q9DAE3 120 aa9.61□□□□□ -0.87
Col2a1-201ENSMUST00000023123 Bod1lE9Q6J5 3032 aa9.61□□□□□ -0.87
Col2a1-201ENSMUST00000023123 Cfap54Q8C6S9 3106 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 88.5 ms