RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Tmed6Q9CQG0 239 aa4.97□□□□□ -1.61
Trim40-203ENSMUST00000172711 Lce1eQ9D139 143 aa4.97□□□□□ -1.61
Trim40-203ENSMUST00000172711 Slamf6Q9ET39 351 aa4.97□□□□□ -1.61
Trim40-203ENSMUST00000172711 Gm26938S4R185 226 aa4.97□□□□□ -1.61
Trim40-203ENSMUST00000172711 2310009B15RikA0A0A6YWI4 143 aa4.97□□□□□ -1.61
Trim40-203ENSMUST00000172711 9430015G10RikA2ASP7 199 aa4.97□□□□□ -1.61
Trim40-203ENSMUST00000172711 Ndufa1O35683 70 aa4.97□□□□□ -1.61
Trim40-203ENSMUST00000172711 CckP09240 115 aa4.97□□□□□ -1.61
Trim40-203ENSMUST00000172711 Mrpl55Q9CZ83 127 aa4.97□□□□□ -1.61
Trim40-203ENSMUST00000172711 Q9D131 166 aa4.97□□□□□ -1.61
Trim40-203ENSMUST00000172711 Trdv2-1A0A0G2JGB9 116 aa4.96□□□□□ -1.62
Trim40-203ENSMUST00000172711 Umad1E0CX23 159 aa4.96□□□□□ -1.62
Trim40-203ENSMUST00000172711 P01819 144 aa4.96□□□□□ -1.62
Trim40-203ENSMUST00000172711 NpsP0C0P8 89 aa4.96□□□□□ -1.62
Trim40-203ENSMUST00000172711 Ss18l2Q9D174 77 aa4.96□□□□□ -1.62
Trim40-203ENSMUST00000172711 Plpp2Q9DAX2 276 aa4.96□□□□□ -1.62
Trim40-203ENSMUST00000172711 MNCb-2875Q9DCB3 74 aa4.96□□□□□ -1.62
Trim40-203ENSMUST00000172711 Trav3-4A0A075B654 114 aa4.95□□□□□ -1.62
Trim40-203ENSMUST00000172711 Gm11444F6QMA6 170 aa4.95□□□□□ -1.62
Trim40-203ENSMUST00000172711 Cdc42se2Q8BGH7 84 aa4.95□□□□□ -1.62
Trim40-203ENSMUST00000172711 Mgst1Q91VS7 155 aa4.95□□□□□ -1.62
Trim40-203ENSMUST00000172711 Gpx7Q99LJ6 186 aa4.95□□□□□ -1.62
Trim40-203ENSMUST00000172711 Fam213bQ9DB60 201 aa4.95□□□□□ -1.62
Trim40-203ENSMUST00000172711 Igkv4-79A0A075B5L8 119 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 Trav14d-1A0A075B6B1 121 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 Gm28269A0A087WSG3 125 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 A730009L09RikA0A1B0GS82 72 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 Smim13E9Q942 88 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 Ighv1-72P01751 139 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 Ca1P13634 261 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 Defa13P50711 93 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 Atp5eP56382 52 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 MymxQ2Q5T5 84 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 Sdhaf1Q3U276 118 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 Polr2kQ63871 58 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 CnfnQ6PCW6 111 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 SpinklQ8CEK3 90 aa4.94□□□□□ -1.62
Trim40-203ENSMUST00000172711 Trav16d-dv11A0A075B617 117 aa4.93□□□□□ -1.62
Trim40-203ENSMUST00000172711 NbdyA0A0N4SUI7 68 aa4.93□□□□□ -1.62
Trim40-203ENSMUST00000172711 MalO09198 153 aa4.93□□□□□ -1.62
Trim40-203ENSMUST00000172711 CrxO54751 299 aa4.93□□□□□ -1.62
Trim40-203ENSMUST00000172711 OstcQ78XF5 149 aa4.93□□□□□ -1.62
Trim40-203ENSMUST00000172711 Fam19a4Q7TPG5 135 aa4.93□□□□□ -1.62
Trim40-203ENSMUST00000172711 Borcs7Q9CRC6 105 aa4.93□□□□□ -1.62
Trim40-203ENSMUST00000172711 Slc25a20Q9Z2Z6 301 aaKnown RBP4.93□□□□□ -1.62
Trim40-203ENSMUST00000172711 Trav14n-3A0A075B645 120 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Esp3J3QN49 87 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 TtrP07309 147 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Sub1P11031 127 aaKnown RBP4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Sprr4Q8CGN8 76 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Map1lc3aQ91VR7 121 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 A0A286YCN5 57 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 BC107364E9Q5A2 140 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 PkigO70139 76 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Vamp8O70404 101 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 PigyP0C1P0 71 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Defa3P28310 93 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Cox8bP48772 70 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Rps28P62858 69 aaKnown RBP4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Tmem136Q3TYE7 245 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 March3Q8BRX9 218 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Cdk2ap2Q9CPY4 127 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Mfap4Q9D1H9 257 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Psmb2Q9R1P3 201 aa4.92□□□□□ -1.62
Trim40-203ENSMUST00000172711 Tfpi2O35536 230 aa4.91□□□□□ -1.62
Trim40-203ENSMUST00000172711 P01791 123 aa4.91□□□□□ -1.62
Trim40-203ENSMUST00000172711 Phf5aP83870 110 aaKnown RBP4.91□□□□□ -1.62
Trim40-203ENSMUST00000172711 Q5BN45 167 aa4.91□□□□□ -1.62
Trim40-203ENSMUST00000172711 Trappc1Q5NCF2 145 aa4.91□□□□□ -1.62
Trim40-203ENSMUST00000172711 Atxn7l1Q9CZ05 146 aa4.91□□□□□ -1.62
Trim40-203ENSMUST00000172711 Ly6hQ9WUC3 139 aa4.91□□□□□ -1.62
Trim40-203ENSMUST00000172711 Gm26920S4R2A5 56 aa4.91□□□□□ -1.62
Trim40-203ENSMUST00000172711 P01823 113 aa4.9□□□□□ -1.63
Trim40-203ENSMUST00000172711 Hint1P70349 126 aaKnown RBP4.9□□□□□ -1.63
Trim40-203ENSMUST00000172711 H2al1aQ5M8Q2 105 aa4.9□□□□□ -1.63
Trim40-203ENSMUST00000172711 Sprr1bQ62267 153 aa4.9□□□□□ -1.63
Trim40-203ENSMUST00000172711 RnasekQ8K3C0 98 aa4.9□□□□□ -1.63
Trim40-203ENSMUST00000172711 HrnrQ8VHD8 2496 aa4.9□□□□□ -1.63
Trim40-203ENSMUST00000172711 Trav7n-4A0A075B620 113 aa4.89□□□□□ -1.63
Trim40-203ENSMUST00000172711 Trav7-4A0A075B6C1 113 aa4.89□□□□□ -1.63
Trim40-203ENSMUST00000172711 Gm10570F6VB42 170 aa4.89□□□□□ -1.63
Trim40-203ENSMUST00000172711 P18527 97 aa4.89□□□□□ -1.63
Trim40-203ENSMUST00000172711 Trav7d-4Q5R1H9 113 aa4.89□□□□□ -1.63
Trim40-203ENSMUST00000172711 Fam168bQ80XQ8 194 aa4.89□□□□□ -1.63
Trim40-203ENSMUST00000172711 Esp24A8R0V6 68 aa4.88□□□□□ -1.63
Trim40-203ENSMUST00000172711 Esp38A8R0X1 80 aa4.88□□□□□ -1.63
Trim40-203ENSMUST00000172711 Gm10542F6XDR3 90 aa4.88□□□□□ -1.63
Trim40-203ENSMUST00000172711 NpyP57774 97 aa4.88□□□□□ -1.63
Trim40-203ENSMUST00000172711 Rpl39P62892 51 aa4.88□□□□□ -1.63
Trim40-203ENSMUST00000172711 Fam19a2Q7TPG7 131 aa4.88□□□□□ -1.63
Trim40-203ENSMUST00000172711 Gm9903Q8C9Y8 129 aa4.88□□□□□ -1.63
Trim40-203ENSMUST00000172711 Ndufc2Q9CQ54 120 aa4.88□□□□□ -1.63
Trim40-203ENSMUST00000172711 Tmem223Q9CQE2 199 aaKnown RBP4.88□□□□□ -1.63
Trim40-203ENSMUST00000172711 Zcchc13Q9D548 170 aa4.88□□□□□ -1.63
Trim40-203ENSMUST00000172711 Ighv2-2A0A075B5P8 116 aa4.87□□□□□ -1.63
Trim40-203ENSMUST00000172711 Ighv2-5A0A0A6YY69 116 aa4.87□□□□□ -1.63
Trim40-203ENSMUST00000172711 Klk12B2RVZ0 247 aa4.87□□□□□ -1.63
Trim40-203ENSMUST00000172711 Samd13D3YUG0 102 aa4.87□□□□□ -1.63
Trim40-203ENSMUST00000172711 P01821 116 aa4.87□□□□□ -1.63
Trim40-203ENSMUST00000172711 Defa7P50705 93 aa4.87□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 65.2 ms