RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 CenpeQ6RT24 2474 aaKnown RBP10.53□□□□□ -0.72
Shank1-202ENSMUST00000107935 1600014C23RikQ9DAX4 101 aa10.52□□□□□ -0.73
Shank1-202ENSMUST00000107935 CadB2RQC6 2225 aa10.51□□□□□ -0.73
Shank1-202ENSMUST00000107935 Gm17689B3GLJ4 109 aa10.5□□□□□ -0.73
Shank1-202ENSMUST00000107935 Prr9Q8BV84 116 aa10.48□□□□□ -0.73
Shank1-202ENSMUST00000107935 Gm43218A0A0G2JGT0 114 aa10.48□□□□□ -0.73
Shank1-202ENSMUST00000107935 Gm10770F7D043 238 aa10.47□□□□□ -0.73
Shank1-202ENSMUST00000107935 Phxr4P15974 95 aa10.47□□□□□ -0.73
Shank1-202ENSMUST00000107935 Arhgap32Q811P8 2089 aa10.46□□□□□ -0.73
Shank1-202ENSMUST00000107935 Defb50Q6TU36 73 aa10.45□□□□□ -0.74
Shank1-202ENSMUST00000107935 Col6a6Q8C6K9 2265 aa10.45□□□□□ -0.74
Shank1-202ENSMUST00000107935 Rpl37aP61514 92 aa10.44□□□□□ -0.74
Shank1-202ENSMUST00000107935 Dmac1Q9CQ00 111 aa10.43□□□□□ -0.74
Shank1-202ENSMUST00000107935 F5O88783 2183 aa10.43□□□□□ -0.74
Shank1-202ENSMUST00000107935 Defb1P56386 69 aa10.43□□□□□ -0.74
Shank1-202ENSMUST00000107935 RetnlbQ99P86 105 aa10.42□□□□□ -0.74
Shank1-202ENSMUST00000107935 Abca4O35600 2310 aa10.42□□□□□ -0.74
Shank1-202ENSMUST00000107935 Gm5464Q3UY29 175 aa10.41□□□□□ -0.74
Shank1-202ENSMUST00000107935 Gm9903Q8C9Y8 129 aa10.41□□□□□ -0.74
Shank1-202ENSMUST00000107935 CrygaP04345 174 aa10.41□□□□□ -0.74
Shank1-202ENSMUST00000107935 Alms1Q8K4E0 3251 aa10.41□□□□□ -0.74
Shank1-202ENSMUST00000107935 Gm9767G3X930 207 aa10.41□□□□□ -0.74
Shank1-202ENSMUST00000107935 MobpQ9D2P8 170 aa10.39□□□□□ -0.75
Shank1-202ENSMUST00000107935 4930507D05RikQ8C9C9 103 aa10.39□□□□□ -0.75
Shank1-202ENSMUST00000107935 Phxr5P08399 672 aa10.39□□□□□ -0.75
Shank1-202ENSMUST00000107935 Gm11213A0A1B0GR83 88 aa10.39□□□□□ -0.75
Shank1-202ENSMUST00000107935 Kiaa1549Q68FD9 1940 aa10.38□□□□□ -0.75
Shank1-202ENSMUST00000107935 Defb2P82020 71 aa10.37□□□□□ -0.75
Shank1-202ENSMUST00000107935 Sptan1P16546 2472 aaKnown RBP10.37□□□□□ -0.75
Shank1-202ENSMUST00000107935 Gm28374F6SG70 93 aa10.37□□□□□ -0.75
Shank1-202ENSMUST00000107935 Pla2g2cP48076 150 aa10.37□□□□□ -0.75
Shank1-202ENSMUST00000107935 Gm10642Q3TWM1 71 aa10.37□□□□□ -0.75
Shank1-202ENSMUST00000107935 Gm11627A6PWP4 55 aa10.36□□□□□ -0.75
Shank1-202ENSMUST00000107935 Gm5617Q91VN2 117 aa10.36□□□□□ -0.75
Shank1-202ENSMUST00000107935 Jmjd1cQ69ZK6 2350 aa10.35□□□□□ -0.75
Shank1-202ENSMUST00000107935 Rnase13Q5GAM7 153 aa10.34□□□□□ -0.75
Shank1-202ENSMUST00000107935 Uqcr11Q9CPX8 56 aa10.34□□□□□ -0.75
Shank1-202ENSMUST00000107935 Defb10Q8R2I8 73 aa10.33□□□□□ -0.76
Shank1-202ENSMUST00000107935 Bri3P28662 125 aa10.32□□□□□ -0.76
Shank1-202ENSMUST00000107935 TectaO08523 2155 aa10.31□□□□□ -0.76
Shank1-202ENSMUST00000107935 Pcsk5Q04592 1877 aa10.3□□□□□ -0.76
Shank1-202ENSMUST00000107935 Lrp4Q8VI56 1905 aa10.3□□□□□ -0.76
Shank1-202ENSMUST00000107935 Gm9573F7C950 1606 aa10.3□□□□□ -0.76
Shank1-202ENSMUST00000107935 AcanQ61282 2132 aaKnown RBP10.3□□□□□ -0.76
Shank1-202ENSMUST00000107935 Ly6g6cQ9Z1Q4 126 aa10.29□□□□□ -0.76
Shank1-202ENSMUST00000107935 SonQ9QX47 2444 aaKnown RBP10.29□□□□□ -0.76
Shank1-202ENSMUST00000107935 Ep300B2RWS6 2412 aa10.29□□□□□ -0.76
Shank1-202ENSMUST00000107935 PtprbB2RU80 1998 aa10.28□□□□□ -0.76
Shank1-202ENSMUST00000107935 Wnk1P83741 2377 aa10.28□□□□□ -0.76
Shank1-202ENSMUST00000107935 Hcfc1Q61191 2045 aaKnown RBP10.27□□□□□ -0.77
Shank1-202ENSMUST00000107935 E130208F15RikQ3UPV3 143 aa10.26□□□□□ -0.77
Shank1-202ENSMUST00000107935 Med13lQ6JPI3 2207 aa10.25□□□□□ -0.77
Shank1-202ENSMUST00000107935 Q8BGJ3 129 aa10.25□□□□□ -0.77
Shank1-202ENSMUST00000107935 Q8BT88 171 aa10.25□□□□□ -0.77
Shank1-202ENSMUST00000107935 Dopey1Q8BL99 2399 aa10.25□□□□□ -0.77
Shank1-202ENSMUST00000107935 DscamQ9ERC8 2013 aa10.23□□□□□ -0.77
Shank1-202ENSMUST00000107935 Eif4ebp3Q80VV3 101 aa10.23□□□□□ -0.77
Shank1-202ENSMUST00000107935 Sec16aA2AIX1 2377 aa10.22□□□□□ -0.77
Shank1-202ENSMUST00000107935 Prol1E9PYQ4 312 aa10.21□□□□□ -0.77
Shank1-202ENSMUST00000107935 Phf5aP83870 110 aaKnown RBP10.21□□□□□ -0.77
Shank1-202ENSMUST00000107935 1810062G17RikG3X8Y2 129 aa10.2□□□□□ -0.78
Shank1-202ENSMUST00000107935 Gm26661M0QWV4 156 aa10.2□□□□□ -0.78
Shank1-202ENSMUST00000107935 Gm20538F6Z9R1 75 aa10.19□□□□□ -0.78
Shank1-202ENSMUST00000107935 Notch3Q61982 2318 aa10.18□□□□□ -0.78
Shank1-202ENSMUST00000107935 Col4a4Q9QZR9 1682 aa10.17□□□□□ -0.78
Shank1-202ENSMUST00000107935 Gm10772F7AIG4 85 aa10.17□□□□□ -0.78
Shank1-202ENSMUST00000107935 Snhg11Q4G0K9 87 aa10.17□□□□□ -0.78
Shank1-202ENSMUST00000107935 Psors1c2Q80ZC9 134 aa10.16□□□□□ -0.78
Shank1-202ENSMUST00000107935 Spg11Q3UHA3 2430 aa10.13□□□□□ -0.79
Shank1-202ENSMUST00000107935 CnbpP53996 178 aaKnown RBP10.13□□□□□ -0.79
Shank1-202ENSMUST00000107935 A330070K13RikQ8CA53 115 aa10.13□□□□□ -0.79
Shank1-202ENSMUST00000107935 Gpr15lA0A0B4J1N3 78 aa10.13□□□□□ -0.79
Shank1-202ENSMUST00000107935 Dido1Q8C9B9 2256 aaKnown RBP10.13□□□□□ -0.79
Shank1-202ENSMUST00000107935 Gm27235Q3UW50 83 aa10.12□□□□□ -0.79
Shank1-202ENSMUST00000107935 Spaca4Q80ZQ0 127 aa10.12□□□□□ -0.79
Shank1-202ENSMUST00000107935 Col27a1Q5QNQ9 1845 aa10.12□□□□□ -0.79
Shank1-202ENSMUST00000107935 C2cd3Q52KB6 2323 aa10.1□□□□□ -0.79
Shank1-202ENSMUST00000107935 Fam229bQ8CF36 80 aa10.1□□□□□ -0.79
Shank1-202ENSMUST00000107935 Fam168bQ80XQ8 194 aa10.09□□□□□ -0.79
Shank1-202ENSMUST00000107935 Gm16181B0V2H2 73 aa10.07□□□□□ -0.8
Shank1-202ENSMUST00000107935 CriptO70333 101 aa10.06□□□□□ -0.8
Shank1-202ENSMUST00000107935 Krtap26-1Q9D7N2 215 aa10.06□□□□□ -0.8
Shank1-202ENSMUST00000107935 Chtf8P0CG14 533 aa10.04□□□□□ -0.8
Shank1-202ENSMUST00000107935 Sorl1O88307 2215 aaKnown RBP10.04□□□□□ -0.8
Shank1-202ENSMUST00000107935 Krtap11-1E9Q2E9 183 aa10.03□□□□□ -0.8
Shank1-202ENSMUST00000107935 Gm10837Q3UTT8 145 aa10.03□□□□□ -0.8
Shank1-202ENSMUST00000107935 AY074887Q8R5F9 132 aa10.03□□□□□ -0.8
Shank1-202ENSMUST00000107935 Srsf12Q8C8K3 266 aa10.02□□□□□ -0.8
Shank1-202ENSMUST00000107935 Gm3285A0A1W2P7U0 201 aa10.02□□□□□ -0.8
Shank1-202ENSMUST00000107935 Col5a1O88207 1838 aa10.01□□□□□ -0.81
Shank1-202ENSMUST00000107935 Cspg4Q8VHY0 2327 aa10.01□□□□□ -0.81
Shank1-202ENSMUST00000107935 NbasE9Q411 2356 aa10□□□□□ -0.81
Shank1-202ENSMUST00000107935 Gm7276Q3TYW4 209 aa10□□□□□ -0.81
Shank1-202ENSMUST00000107935 Gvin1Q80SU7 2427 aa9.99□□□□□ -0.81
Shank1-202ENSMUST00000107935 Nav2E9Q842 2432 aa9.99□□□□□ -0.81
Shank1-202ENSMUST00000107935 Pkd1l2Q7TN88 2461 aa9.95□□□□□ -0.82
Shank1-202ENSMUST00000107935 Sprr4Q8CGN8 76 aa9.94□□□□□ -0.82
Shank1-202ENSMUST00000107935 Gm3880A0A1B0GSB3 72 aa9.94□□□□□ -0.82
Shank1-202ENSMUST00000107935 Gm21798J3QNU5 87 aa9.94□□□□□ -0.82
Shank1-202ENSMUST00000107935 C530025M09RikF6RGA8 229 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms