RNA–Protein interactions for RNA: ENSMUST00000106550.10

Knop1-204, Transcript of Lysine-rich nucleolar protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Knop1, Length 5,524 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knop1-204ENSMUST00000106550 Ighv1-56A0A0A6YXG2 117 aa9.7□□□□□ -0.86
Knop1-204ENSMUST00000106550 A730009L09RikA0A1B0GS82 72 aa9.69□□□□□ -0.86
Knop1-204ENSMUST00000106550 Wfdc17Q5SSJ1 76 aa9.69□□□□□ -0.86
Knop1-204ENSMUST00000106550 Gm28374F6SG70 93 aa9.69□□□□□ -0.86
Knop1-204ENSMUST00000106550 Piezo2Q8CD54 2822 aa9.68□□□□□ -0.86
Knop1-204ENSMUST00000106550 Defb45Q3V490 66 aa9.68□□□□□ -0.86
Knop1-204ENSMUST00000106550 Lrrk2Q5S006 2527 aa9.67□□□□□ -0.86
Knop1-204ENSMUST00000106550 Tln1P26039 2541 aaKnown RBP9.67□□□□□ -0.86
Knop1-204ENSMUST00000106550 Cdip1Q9DB75 208 aa9.66□□□□□ -0.86
Knop1-204ENSMUST00000106550 CrygaP04345 174 aa9.66□□□□□ -0.86
Knop1-204ENSMUST00000106550 SrcapA0A087WQ44 3271 aa9.65□□□□□ -0.86
Knop1-204ENSMUST00000106550 Defb39Q70KL3 74 aa9.65□□□□□ -0.87
Knop1-204ENSMUST00000106550 H2al1kJ3QP08 105 aa9.64□□□□□ -0.87
Knop1-204ENSMUST00000106550 Defb37Q7TMD2 62 aa9.64□□□□□ -0.87
Knop1-204ENSMUST00000106550 Abca2P41234 2434 aa9.63□□□□□ -0.87
Knop1-204ENSMUST00000106550 Ankhd1E9PUR0 2548 aaKnown RBP9.63□□□□□ -0.87
Knop1-204ENSMUST00000106550 SnurfQ9WU12 71 aa9.63□□□□□ -0.87
Knop1-204ENSMUST00000106550 Igkv8-19A0A0G2JFN8 121 aa9.62□□□□□ -0.87
Knop1-204ENSMUST00000106550 MobpQ9D2P8 170 aa9.62□□□□□ -0.87
Knop1-204ENSMUST00000106550 Pkd1l2Q7TN88 2461 aa9.62□□□□□ -0.87
Knop1-204ENSMUST00000106550 Reg3aO09037 175 aa9.61□□□□□ -0.87
Knop1-204ENSMUST00000106550 Gm16181B0V2H2 73 aa9.61□□□□□ -0.87
Knop1-204ENSMUST00000106550 Cox6a2P43023 97 aa9.61□□□□□ -0.87
Knop1-204ENSMUST00000106550 Gm10570F6VB42 170 aa9.6□□□□□ -0.87
Knop1-204ENSMUST00000106550 E130208F15RikQ3UPV3 143 aa9.6□□□□□ -0.87
Knop1-204ENSMUST00000106550 Hivep2Q3UHF7 2430 aa9.6□□□□□ -0.87
Knop1-204ENSMUST00000106550 Mrpl34Q99N91 92 aa9.6□□□□□ -0.87
Knop1-204ENSMUST00000106550 Krtap24-1G3X9A2 248 aa9.58□□□□□ -0.88
Knop1-204ENSMUST00000106550 Sostdc1Q9CQN4 206 aa9.58□□□□□ -0.88
Knop1-204ENSMUST00000106550 Msrb1Q9JLC3 116 aa9.58□□□□□ -0.88
Knop1-204ENSMUST00000106550 Chchd10Q7TNL9 138 aa9.58□□□□□ -0.88
Knop1-204ENSMUST00000106550 1700018G05RikA0A1B0GSI2 66 aa9.58□□□□□ -0.88
Knop1-204ENSMUST00000106550 4930519P11RikQ9CUJ8 166 aa9.58□□□□□ -0.88
Knop1-204ENSMUST00000106550 Gm11627A6PWP4 55 aa9.57□□□□□ -0.88
Knop1-204ENSMUST00000106550 Gm10642Q3TWM1 71 aa9.56□□□□□ -0.88
Knop1-204ENSMUST00000106550 Csdc2Q91YQ3 154 aa9.56□□□□□ -0.88
Knop1-204ENSMUST00000106550 Sptbn4E9PX29 2561 aa9.56□□□□□ -0.88
Knop1-204ENSMUST00000106550 4930518I15RikQ3V2W7 57 aa9.56□□□□□ -0.88
Knop1-204ENSMUST00000106550 P01819 144 aa9.55□□□□□ -0.88
Knop1-204ENSMUST00000106550 Ighv2-5A0A0A6YY69 116 aa9.55□□□□□ -0.88
Knop1-204ENSMUST00000106550 Snhg11Q4G0K9 87 aa9.54□□□□□ -0.88
Knop1-204ENSMUST00000106550 Krtap26-1Q9D7N2 215 aa9.54□□□□□ -0.88
Knop1-204ENSMUST00000106550 Chd8Q09XV5 2582 aaKnown RBP9.54□□□□□ -0.88
Knop1-204ENSMUST00000106550 Coa6Q8BGD8 79 aa9.53□□□□□ -0.88
Knop1-204ENSMUST00000106550 Dmac1Q9CQ00 111 aa9.53□□□□□ -0.88
Knop1-204ENSMUST00000106550 Gm26661M0QWV4 156 aa9.53□□□□□ -0.88
Knop1-204ENSMUST00000106550 Elof1P60003 83 aa9.52□□□□□ -0.88
Knop1-204ENSMUST00000106550 Igkv8-27A0A0G2JF28 120 aa9.51□□□□□ -0.89
Knop1-204ENSMUST00000106550 Fam19a3Q7TPG6 132 aa9.51□□□□□ -0.89
Knop1-204ENSMUST00000106550 6430550D23RikE9Q1X6 194 aa9.5□□□□□ -0.89
Knop1-204ENSMUST00000106550 2310034G01RikA0A286YDL3 209 aa9.5□□□□□ -0.89
Knop1-204ENSMUST00000106550 Bean1Q9EQG5 255 aa9.49□□□□□ -0.89
Knop1-204ENSMUST00000106550 Gm3250E9Q1M3 230 aa9.49□□□□□ -0.89
Knop1-204ENSMUST00000106550 Defb11Q8R2I7 77 aa9.49□□□□□ -0.89
Knop1-204ENSMUST00000106550 Ttc28Q80XJ3 2450 aa9.49□□□□□ -0.89
Knop1-204ENSMUST00000106550 Nav3Q80TN7 2359 aa9.49□□□□□ -0.89
Knop1-204ENSMUST00000106550 Ighv2-2A0A075B5P8 116 aa9.48□□□□□ -0.89
Knop1-204ENSMUST00000106550 P01821 116 aa9.48□□□□□ -0.89
Knop1-204ENSMUST00000106550 Gm9903Q8C9Y8 129 aa9.48□□□□□ -0.89
Knop1-204ENSMUST00000106550 Gm21886J3QJU9 214 aa9.48□□□□□ -0.89
Knop1-204ENSMUST00000106550 Gm10772F7AIG4 85 aa9.48□□□□□ -0.89
Knop1-204ENSMUST00000106550 Gm44790A0A0N4SV91 103 aa9.45□□□□□ -0.9
Knop1-204ENSMUST00000106550 Phf5aP83870 110 aaKnown RBP9.45□□□□□ -0.9
Knop1-204ENSMUST00000106550 Gm10197F6QEY5 67 aa9.45□□□□□ -0.9
Knop1-204ENSMUST00000106550 Gm10160F6Y577 67 aa9.45□□□□□ -0.9
Knop1-204ENSMUST00000106550 AI854703Q8BIN3 203 aa9.45□□□□□ -0.9
Knop1-204ENSMUST00000106550 Psors1c2Q80ZC9 134 aa9.45□□□□□ -0.9
Knop1-204ENSMUST00000106550 AI606181Q8C7B9 129 aa9.44□□□□□ -0.9
Knop1-204ENSMUST00000106550 Znf414Q9DCK4 299 aa9.43□□□□□ -0.9
Knop1-204ENSMUST00000106550 SetxA2AKX3 2646 aa9.42□□□□□ -0.9
Knop1-204ENSMUST00000106550 Notch2O35516 2470 aa9.42□□□□□ -0.9
Knop1-204ENSMUST00000106550 Gm10770F7D043 238 aa9.42□□□□□ -0.9
Knop1-204ENSMUST00000106550 Spint4Q9D263 159 aa9.41□□□□□ -0.9
Knop1-204ENSMUST00000106550 Spata3Q9D9T6 193 aa9.4□□□□□ -0.9
Knop1-204ENSMUST00000106550 Gm17606F6ZL36 78 aa9.39□□□□□ -0.91
Knop1-204ENSMUST00000106550 Prol1E9PYQ4 312 aa9.39□□□□□ -0.91
Knop1-204ENSMUST00000106550 Gm10837Q3UTT8 145 aa9.37□□□□□ -0.91
Knop1-204ENSMUST00000106550 Gm10999F6Q4M4 69 aa9.37□□□□□ -0.91
Knop1-204ENSMUST00000106550 Usp9xP70398 2559 aaKnown RBP9.36□□□□□ -0.91
Knop1-204ENSMUST00000106550 Defb50Q6TU36 73 aa9.36□□□□□ -0.91
Knop1-204ENSMUST00000106550 Ptpn13Q64512 2453 aa9.36□□□□□ -0.91
Knop1-204ENSMUST00000106550 Krtap16-1A2A5X5 502 aa9.36□□□□□ -0.91
Knop1-204ENSMUST00000106550 Gpr15lA0A0B4J1N3 78 aa9.35□□□□□ -0.91
Knop1-204ENSMUST00000106550 Krtap11-1E9Q2E9 183 aa9.34□□□□□ -0.91
Knop1-204ENSMUST00000106550 Rpl37aP61514 92 aa9.34□□□□□ -0.91
Knop1-204ENSMUST00000106550 Fam168bQ80XQ8 194 aa9.33□□□□□ -0.92
Knop1-204ENSMUST00000106550 Gm10308Q9CVR5 141 aa9.33□□□□□ -0.92
Knop1-204ENSMUST00000106550 A930002H24RikQ8C8Y3 163 aa9.32□□□□□ -0.92
Knop1-204ENSMUST00000106550 Gm27235Q3UW50 83 aa9.32□□□□□ -0.92
Knop1-204ENSMUST00000106550 Spaca4Q80ZQ0 127 aa9.31□□□□□ -0.92
Knop1-204ENSMUST00000106550 Q8BT88 171 aa9.31□□□□□ -0.92
Knop1-204ENSMUST00000106550 AplnQ9R0R4 77 aa9.31□□□□□ -0.92
Knop1-204ENSMUST00000106550 Hcfc1Q61191 2045 aaKnown RBP9.31□□□□□ -0.92
Knop1-204ENSMUST00000106550 Gm17689B3GLJ4 109 aa9.3□□□□□ -0.92
Knop1-204ENSMUST00000106550 A530084C06RikQ3UTW2 186 aa9.3□□□□□ -0.92
Knop1-204ENSMUST00000106550 Gm5617Q91VN2 117 aa9.3□□□□□ -0.92
Knop1-204ENSMUST00000106550 Rps28P62858 69 aaKnown RBP9.28□□□□□ -0.92
Knop1-204ENSMUST00000106550 Hivep3A2A884 2348 aa9.27□□□□□ -0.92
Knop1-204ENSMUST00000106550 RetnlbQ99P86 105 aa9.26□□□□□ -0.93
Knop1-204ENSMUST00000106550 Sprr4Q8CGN8 76 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms