RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Gm10160F6Y577 67 aa10.24□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 NbasE9Q411 2356 aa10.24□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 Bri3P28662 125 aa10.24□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 AcanQ61282 2132 aaKnown RBP10.24□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 MobpQ9D2P8 170 aa10.23□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 Msrb1Q9JLC3 116 aa10.23□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 Gm9903Q8C9Y8 129 aa10.23□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 Chchd10Q7TNL9 138 aa10.23□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 Defb38Q7TNV7 63 aa10.22□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 AI606181Q8C7B9 129 aa10.22□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 Bean1Q9EQG5 255 aa10.21□□□□□ -0.77
Pcdha1-201ENSMUST00000070797 Elof1P60003 83 aa10.21□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 DscamQ9ERC8 2013 aa10.21□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 Gm28230A0A0A0MQ91 144 aa10.2□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 Igkv3-12A0A140T8P0 119 aa10.2□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 Col4a2P08122 1707 aa10.2□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 Defb2P82020 71 aa10.19□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 Krtap26-1Q9D7N2 215 aa10.18□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 Reg3aO09037 175 aa10.18□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 CrygfQ9CXV3 174 aa10.18□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 SrcapA0A087WQ44 3271 aa10.17□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 Psors1c2Q80ZC9 134 aa10.17□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 Gm26661M0QWV4 156 aa10.16□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 Alms1Q8K4E0 3251 aa10.15□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 D730001G18RikA0A087WQU7 115 aa10.15□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 Coa5Q99M07 74 aa10.15□□□□□ -0.78
Pcdha1-201ENSMUST00000070797 Dido1Q8C9B9 2256 aaKnown RBP10.14□□□□□ -0.79
Pcdha1-201ENSMUST00000070797 Hcfc1Q61191 2045 aaKnown RBP10.13□□□□□ -0.79
Pcdha1-201ENSMUST00000070797 Defb37Q7TMD2 62 aa10.12□□□□□ -0.79
Pcdha1-201ENSMUST00000070797 Phxr4P15974 95 aa10.11□□□□□ -0.79
Pcdha1-201ENSMUST00000070797 Gm17689B3GLJ4 109 aa10.11□□□□□ -0.79
Pcdha1-201ENSMUST00000070797 Igkv8-19A0A0G2JFN8 121 aa10.1□□□□□ -0.79
Pcdha1-201ENSMUST00000070797 Gm21886J3QJU9 214 aa10.1□□□□□ -0.79
Pcdha1-201ENSMUST00000070797 Eif4ebp3Q80VV3 101 aa10.09□□□□□ -0.79
Pcdha1-201ENSMUST00000070797 Defb10Q8R2I8 73 aa10.09□□□□□ -0.79
Pcdha1-201ENSMUST00000070797 Gm10770F7D043 238 aa10.08□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 OtoglF7A4A7 2325 aa10.08□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Flg2Q2VIS4 2362 aa10.08□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Brwd1Q921C3 2304 aa10.07□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Gm20661K7N787 53 aa10.07□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 PscaP57096 123 aa10.07□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Gm44790A0A0N4SV91 103 aa10.07□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 1810062G17RikG3X8Y2 129 aa10.06□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Nupr2Q497P3 102 aa10.06□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 A730009L09RikA0A1B0GS82 72 aa10.06□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Gm9767G3X930 207 aa10.06□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Dmac1Q9CQ00 111 aa10.06□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 1700018G05RikA0A1B0GSI2 66 aa10.06□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Gm11213A0A1B0GR83 88 aa10.05□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Sorl1O88307 2215 aaKnown RBP10.05□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Chd8Q09XV5 2582 aaKnown RBP10.05□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Golgb1E9PVZ8 3238 aa10.04□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Gm11627A6PWP4 55 aa10.03□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Igkv3-7A0A0G2JE31 119 aa10.03□□□□□ -0.8
Pcdha1-201ENSMUST00000070797 Lrrk2Q5S006 2527 aa10.02□□□□□ -0.81
Pcdha1-201ENSMUST00000070797 Gm16485Q8C4B7 115 aa10.02□□□□□ -0.81
Pcdha1-201ENSMUST00000070797 Wfdc6bF6ULY1 148 aa10□□□□□ -0.81
Pcdha1-201ENSMUST00000070797 Gm10772F7AIG4 85 aa10□□□□□ -0.81
Pcdha1-201ENSMUST00000070797 Defb50Q6TU36 73 aa9.99□□□□□ -0.81
Pcdha1-201ENSMUST00000070797 Gm3285A0A1W2P7U0 201 aa9.98□□□□□ -0.81
Pcdha1-201ENSMUST00000070797 Igkv8-28A0A0G2JE47 121 aa9.97□□□□□ -0.81
Pcdha1-201ENSMUST00000070797 Srsf12Q8C8K3 266 aa9.95□□□□□ -0.82
Pcdha1-201ENSMUST00000070797 Gm5617Q91VN2 117 aa9.94□□□□□ -0.82
Pcdha1-201ENSMUST00000070797 CnbpP53996 178 aaKnown RBP9.94□□□□□ -0.82
Pcdha1-201ENSMUST00000070797 Abca2P41234 2434 aa9.93□□□□□ -0.82
Pcdha1-201ENSMUST00000070797 Uqcr11Q9CPX8 56 aa9.92□□□□□ -0.82
Pcdha1-201ENSMUST00000070797 Gm28374F6SG70 93 aa9.91□□□□□ -0.82
Pcdha1-201ENSMUST00000070797 Hivep2Q3UHF7 2430 aa9.91□□□□□ -0.82
Pcdha1-201ENSMUST00000070797 E130208F15RikQ3UPV3 143 aa9.9□□□□□ -0.82
Pcdha1-201ENSMUST00000070797 Gm12216A0A1W2P827 62 aa9.9□□□□□ -0.82
Pcdha1-201ENSMUST00000070797 Wfdc17Q5SSJ1 76 aa9.9□□□□□ -0.82
Pcdha1-201ENSMUST00000070797 Prol1E9PYQ4 312 aa9.9□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 Sprr1bQ62267 153 aa9.89□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 Wfdc3Q14AE4 130 aa9.89□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 Notch2O35516 2470 aa9.89□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 Znf414Q9DCK4 299 aa9.88□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 Tln1P26039 2541 aaKnown RBP9.88□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 Sptbn4E9PX29 2561 aa9.87□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 Adm2Q7TNK8 150 aa9.86□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 AY074887Q8R5F9 132 aa9.86□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 Gm7276Q3TYW4 209 aa9.85□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 Ly6g6cQ9Z1Q4 126 aa9.85□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 BC067074F6RXI4 2391 aa9.84□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 C2cd3Q52KB6 2323 aa9.84□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 Q8BT88 171 aa9.84□□□□□ -0.83
Pcdha1-201ENSMUST00000070797 Rpl37aP61514 92 aa9.83□□□□□ -0.84
Pcdha1-201ENSMUST00000070797 A930002H24RikQ8C8Y3 163 aa9.83□□□□□ -0.84
Pcdha1-201ENSMUST00000070797 Gm10837Q3UTT8 145 aa9.82□□□□□ -0.84
Pcdha1-201ENSMUST00000070797 Fam229bQ8CF36 80 aa9.81□□□□□ -0.84
Pcdha1-201ENSMUST00000070797 Pkd1l2Q7TN88 2461 aa9.81□□□□□ -0.84
Pcdha1-201ENSMUST00000070797 Ttc28Q80XJ3 2450 aa9.81□□□□□ -0.84
Pcdha1-201ENSMUST00000070797 Gm10999F6Q4M4 69 aa9.81□□□□□ -0.84
Pcdha1-201ENSMUST00000070797 A330070K13RikQ8CA53 115 aa9.8□□□□□ -0.84
Pcdha1-201ENSMUST00000070797 Ankhd1E9PUR0 2548 aaKnown RBP9.79□□□□□ -0.84
Pcdha1-201ENSMUST00000070797 4930507D05RikQ8C9C9 103 aa9.79□□□□□ -0.84
Pcdha1-201ENSMUST00000070797 Snhg11Q4G0K9 87 aa9.78□□□□□ -0.84
Pcdha1-201ENSMUST00000070797 Gm16181B0V2H2 73 aa9.78□□□□□ -0.84
Pcdha1-201ENSMUST00000070797 Myo9aQ8C170 2542 aa9.76□□□□□ -0.85
Pcdha1-201ENSMUST00000070797 Gm17606F6ZL36 78 aa9.75□□□□□ -0.85
Pcdha1-201ENSMUST00000070797 Hivep3A2A884 2348 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 59.8 ms