RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Gm10549Q3URY4 149 aa12.25□□□□□ -0.45
Usp48-201ENSMUST00000055131 BC025920Q3US60 128 aa12.25□□□□□ -0.45
Usp48-201ENSMUST00000055131 H2al1kJ3QP08 105 aa12.24□□□□□ -0.45
Usp48-201ENSMUST00000055131 Lrp4Q8VI56 1905 aa12.23□□□□□ -0.45
Usp48-201ENSMUST00000055131 Zfand2aQ9JII7 171 aa12.23□□□□□ -0.45
Usp48-201ENSMUST00000055131 Hivep2Q3UHF7 2430 aa12.22□□□□□ -0.45
Usp48-201ENSMUST00000055131 PtprbB2RU80 1998 aa12.21□□□□□ -0.45
Usp48-201ENSMUST00000055131 Q9DAA7 145 aa12.21□□□□□ -0.46
Usp48-201ENSMUST00000055131 SnurfQ9WU12 71 aa12.2□□□□□ -0.46
Usp48-201ENSMUST00000055131 Defb39Q70KL3 74 aa12.2□□□□□ -0.46
Usp48-201ENSMUST00000055131 Cd164Q9R0L9 197 aa12.19□□□□□ -0.46
Usp48-201ENSMUST00000055131 Gm28230A0A0A0MQ91 144 aa12.19□□□□□ -0.46
Usp48-201ENSMUST00000055131 Ntn5Q3UQ22 452 aa12.18□□□□□ -0.46
Usp48-201ENSMUST00000055131 UqcrqQ9CQ69 82 aa12.17□□□□□ -0.46
Usp48-201ENSMUST00000055131 Znf580Q9DB38 172 aa12.16□□□□□ -0.46
Usp48-201ENSMUST00000055131 Zfp462B1AWL2 2495 aaKnown RBP12.16□□□□□ -0.46
Usp48-201ENSMUST00000055131 Gm28374F6SG70 93 aa12.15□□□□□ -0.46
Usp48-201ENSMUST00000055131 Usp9xP70398 2559 aaKnown RBP12.15□□□□□ -0.46
Usp48-201ENSMUST00000055131 Bahcc1Q3UHR0 2643 aa12.15□□□□□ -0.46
Usp48-201ENSMUST00000055131 Crip3Q6Q6R3 243 aa12.15□□□□□ -0.46
Usp48-201ENSMUST00000055131 Defb37Q7TMD2 62 aa12.15□□□□□ -0.46
Usp48-201ENSMUST00000055131 4930519P11RikQ9CUJ8 166 aa12.15□□□□□ -0.46
Usp48-201ENSMUST00000055131 Nav3Q80TN7 2359 aa12.14□□□□□ -0.47
Usp48-201ENSMUST00000055131 PcntP48725 2898 aa12.14□□□□□ -0.47
Usp48-201ENSMUST00000055131 A730009L09RikA0A1B0GS82 72 aa12.14□□□□□ -0.47
Usp48-201ENSMUST00000055131 Gm10570F6VB42 170 aa12.13□□□□□ -0.47
Usp48-201ENSMUST00000055131 Col27a1Q5QNQ9 1845 aa12.13□□□□□ -0.47
Usp48-201ENSMUST00000055131 Igkv8-19A0A0G2JFN8 121 aa12.12□□□□□ -0.47
Usp48-201ENSMUST00000055131 Reg3aO09037 175 aa12.12□□□□□ -0.47
Usp48-201ENSMUST00000055131 3110070M22RikQ9DAQ7 118 aa12.12□□□□□ -0.47
Usp48-201ENSMUST00000055131 Cdip1Q9DB75 208 aa12.12□□□□□ -0.47
Usp48-201ENSMUST00000055131 Gm3250E9Q1M3 230 aa12.1□□□□□ -0.47
Usp48-201ENSMUST00000055131 Ighv1-56A0A0A6YXG2 117 aa12.09□□□□□ -0.47
Usp48-201ENSMUST00000055131 Hivep3A2A884 2348 aa12.09□□□□□ -0.47
Usp48-201ENSMUST00000055131 Col4a2P08122 1707 aa12.09□□□□□ -0.47
Usp48-201ENSMUST00000055131 Smr3aQ61900 147 aa12.06□□□□□ -0.48
Usp48-201ENSMUST00000055131 Defb45Q3V490 66 aa12.05□□□□□ -0.48
Usp48-201ENSMUST00000055131 Srsf12Q8C8K3 266 aa12.05□□□□□ -0.48
Usp48-201ENSMUST00000055131 Mrpl34Q99N91 92 aa12.05□□□□□ -0.48
Usp48-201ENSMUST00000055131 Bean1Q9EQG5 255 aa12.05□□□□□ -0.48
Usp48-201ENSMUST00000055131 1700018G05RikA0A1B0GSI2 66 aa12.04□□□□□ -0.48
Usp48-201ENSMUST00000055131 Cox6a2P43023 97 aa12.04□□□□□ -0.48
Usp48-201ENSMUST00000055131 Gm43218A0A0G2JGT0 114 aa12.03□□□□□ -0.48
Usp48-201ENSMUST00000055131 Gm10642Q3TWM1 71 aa12.02□□□□□ -0.49
Usp48-201ENSMUST00000055131 4930518I15RikQ3V2W7 57 aa12.01□□□□□ -0.49
Usp48-201ENSMUST00000055131 TrioQ0KL02 3102 aa12.01□□□□□ -0.49
Usp48-201ENSMUST00000055131 6430550D23RikE9Q1X6 194 aa12.01□□□□□ -0.49
Usp48-201ENSMUST00000055131 Msrb1Q9JLC3 116 aa12□□□□□ -0.49
Usp48-201ENSMUST00000055131 CrygaP04345 174 aa12□□□□□ -0.49
Usp48-201ENSMUST00000055131 Coa6Q8BGD8 79 aa11.99□□□□□ -0.49
Usp48-201ENSMUST00000055131 Sostdc1Q9CQN4 206 aa11.98□□□□□ -0.49
Usp48-201ENSMUST00000055131 MobpQ9D2P8 170 aa11.97□□□□□ -0.49
Usp48-201ENSMUST00000055131 Dnah12Q3V0Q1 3086 aa11.96□□□□□ -0.5
Usp48-201ENSMUST00000055131 Gm10197F6QEY5 67 aa11.95□□□□□ -0.5
Usp48-201ENSMUST00000055131 Setd2E9Q5F9 2537 aa11.95□□□□□ -0.5
Usp48-201ENSMUST00000055131 Chchd10Q7TNL9 138 aa11.95□□□□□ -0.5
Usp48-201ENSMUST00000055131 MtorQ9JLN9 2549 aa11.94□□□□□ -0.5
Usp48-201ENSMUST00000055131 E130208F15RikQ3UPV3 143 aa11.94□□□□□ -0.5
Usp48-201ENSMUST00000055131 Gm16181B0V2H2 73 aa11.93□□□□□ -0.5
Usp48-201ENSMUST00000055131 Fam19a3Q7TPG6 132 aa11.93□□□□□ -0.5
Usp48-201ENSMUST00000055131 Gm21886J3QJU9 214 aa11.92□□□□□ -0.5
Usp48-201ENSMUST00000055131 Lama3Q61789 3330 aa11.92□□□□□ -0.5
Usp48-201ENSMUST00000055131 Abca12E9Q876 2595 aa11.91□□□□□ -0.5
Usp48-201ENSMUST00000055131 Igkv8-27A0A0G2JF28 120 aa11.91□□□□□ -0.5
Usp48-201ENSMUST00000055131 Ighv2-5A0A0A6YY69 116 aa11.91□□□□□ -0.5
Usp48-201ENSMUST00000055131 Gm11627A6PWP4 55 aa11.91□□□□□ -0.5
Usp48-201ENSMUST00000055131 Gm10160F6Y577 67 aa11.91□□□□□ -0.5
Usp48-201ENSMUST00000055131 Spint4Q9D263 159 aa11.9□□□□□ -0.5
Usp48-201ENSMUST00000055131 2310034G01RikA0A286YDL3 209 aa11.9□□□□□ -0.5
Usp48-201ENSMUST00000055131 Dmac1Q9CQ00 111 aa11.89□□□□□ -0.51
Usp48-201ENSMUST00000055131 Csdc2Q91YQ3 154 aa11.89□□□□□ -0.51
Usp48-201ENSMUST00000055131 Gm44790A0A0N4SV91 103 aa11.89□□□□□ -0.51
Usp48-201ENSMUST00000055131 Krtap24-1G3X9A2 248 aa11.89□□□□□ -0.51
Usp48-201ENSMUST00000055131 P01819 144 aa11.89□□□□□ -0.51
Usp48-201ENSMUST00000055131 Elof1P60003 83 aa11.89□□□□□ -0.51
Usp48-201ENSMUST00000055131 Snhg11Q4G0K9 87 aa11.89□□□□□ -0.51
Usp48-201ENSMUST00000055131 Gm17606F6ZL36 78 aa11.88□□□□□ -0.51
Usp48-201ENSMUST00000055131 AI606181Q8C7B9 129 aa11.87□□□□□ -0.51
Usp48-201ENSMUST00000055131 AI854703Q8BIN3 203 aa11.87□□□□□ -0.51
Usp48-201ENSMUST00000055131 Cep350E9Q309 3095 aa11.87□□□□□ -0.51
Usp48-201ENSMUST00000055131 Phf5aP83870 110 aaKnown RBP11.85□□□□□ -0.51
Usp48-201ENSMUST00000055131 Gm10999F6Q4M4 69 aa11.84□□□□□ -0.51
Usp48-201ENSMUST00000055131 Col5a1O88207 1838 aa11.84□□□□□ -0.51
Usp48-201ENSMUST00000055131 Lama2Q60675 3118 aaKnown RBP11.84□□□□□ -0.51
Usp48-201ENSMUST00000055131 Zfp292Q9Z2U2 2698 aa11.83□□□□□ -0.51
Usp48-201ENSMUST00000055131 Defb50Q6TU36 73 aa11.83□□□□□ -0.52
Usp48-201ENSMUST00000055131 Ighv2-2A0A075B5P8 116 aa11.82□□□□□ -0.52
Usp48-201ENSMUST00000055131 P01821 116 aa11.82□□□□□ -0.52
Usp48-201ENSMUST00000055131 Epg5Q80TA9 2572 aa11.81□□□□□ -0.52
Usp48-201ENSMUST00000055131 Gm10770F7D043 238 aa11.81□□□□□ -0.52
Usp48-201ENSMUST00000055131 Unc79Q0KK59 2596 aa11.8□□□□□ -0.52
Usp48-201ENSMUST00000055131 Defb11Q8R2I7 77 aa11.79□□□□□ -0.52
Usp48-201ENSMUST00000055131 Gm26661M0QWV4 156 aa11.78□□□□□ -0.52
Usp48-201ENSMUST00000055131 Rpl37aP61514 92 aa11.78□□□□□ -0.52
Usp48-201ENSMUST00000055131 Gm10772F7AIG4 85 aa11.78□□□□□ -0.52
Usp48-201ENSMUST00000055131 Znf414Q9DCK4 299 aa11.78□□□□□ -0.52
Usp48-201ENSMUST00000055131 A930002H24RikQ8C8Y3 163 aa11.77□□□□□ -0.53
Usp48-201ENSMUST00000055131 A530084C06RikQ3UTW2 186 aa11.77□□□□□ -0.53
Usp48-201ENSMUST00000055131 Gm9903Q8C9Y8 129 aa11.76□□□□□ -0.53
Usp48-201ENSMUST00000055131 Gpr15lA0A0B4J1N3 78 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms