RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 1600014C23RikQ9DAX4 101 aa10.04□□□□□ -0.8
Col5a1-201ENSMUST00000028280 Rps28P62858 69 aaKnown RBP10.04□□□□□ -0.8
Col5a1-201ENSMUST00000028280 A530084C06RikQ3UTW2 186 aa10.03□□□□□ -0.8
Col5a1-201ENSMUST00000028280 BC025920Q3US60 128 aa10.03□□□□□ -0.8
Col5a1-201ENSMUST00000028280 Gm43218A0A0G2JGT0 114 aa10.02□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Gm9922Q8C3P1 144 aa10.01□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Mrpl34Q99N91 92 aa10.01□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Zfand2aQ9JII7 171 aa10.01□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Defb39Q70KL3 74 aa10.01□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Cdip1Q9DB75 208 aa10.01□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Krtap27-1E9PX37 202 aa10□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Spink13Q3UTS8 97 aa10□□□□□ -0.81
Col5a1-201ENSMUST00000028280 B430305J03RikQ8BQQ8 176 aa10□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Tln1P26039 2541 aaKnown RBP10□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Znf414Q9DCK4 299 aa10□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Piezo1E2JF22 2547 aa9.99□□□□□ -0.81
Col5a1-201ENSMUST00000028280 P01819 144 aa9.99□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Smr3aQ61900 147 aa9.99□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Defb45Q3V490 66 aa9.99□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Gm20661K7N787 53 aa9.98□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Pla2g2eQ9QUL3 142 aa9.97□□□□□ -0.81
Col5a1-201ENSMUST00000028280 RetnlbQ99P86 105 aa9.97□□□□□ -0.81
Col5a1-201ENSMUST00000028280 6430550D23RikE9Q1X6 194 aa9.97□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Q9DAA7 145 aa9.96□□□□□ -0.81
Col5a1-201ENSMUST00000028280 Igkv8-27A0A0G2JF28 120 aa9.95□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Cox6a2P43023 97 aa9.95□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Gm10999F6Q4M4 69 aa9.95□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Defb50Q6TU36 73 aa9.94□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Msrb1Q9JLC3 116 aa9.93□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Ighv8-13A0A075B5Y0 101 aa9.93□□□□□ -0.82
Col5a1-201ENSMUST00000028280 MtorQ9JLN9 2549 aa9.93□□□□□ -0.82
Col5a1-201ENSMUST00000028280 B230217C12RikE9Q3Z1 139 aa9.93□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Ly6g6cQ9Z1Q4 126 aa9.92□□□□□ -0.82
Col5a1-201ENSMUST00000028280 A930002H24RikQ8C8Y3 163 aa9.92□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Ighv2-5A0A0A6YY69 116 aa9.92□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Wisp2Q9Z0G4 251 aa9.92□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Fam19a3Q7TPG6 132 aa9.91□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Gm16485Q8C4B7 115 aa9.91□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Pla2g2cP48076 150 aa9.9□□□□□ -0.82
Col5a1-201ENSMUST00000028280 D730001G18RikA0A087WQU7 115 aa9.9□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Gm9573F7C950 1606 aa9.9□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Krtap16-1A2A5X5 502 aa9.9□□□□□ -0.82
Col5a1-201ENSMUST00000028280 A930009A15RikG3UYI6 118 aa9.9□□□□□ -0.82
Col5a1-201ENSMUST00000028280 Znf575Q3TXZ1 239 aa9.9□□□□□ -0.82
Col5a1-201ENSMUST00000028280 2310034G01RikA0A286YDL3 209 aa9.89□□□□□ -0.83
Col5a1-201ENSMUST00000028280 Piezo2Q8CD54 2822 aa9.89□□□□□ -0.83
Col5a1-201ENSMUST00000028280 Setd2E9Q5F9 2537 aa9.89□□□□□ -0.83
Col5a1-201ENSMUST00000028280 Gm28374F6SG70 93 aa9.89□□□□□ -0.83
Col5a1-201ENSMUST00000028280 Dmbt1Q60997 2085 aa9.88□□□□□ -0.83
Col5a1-201ENSMUST00000028280 Prol1E9PYQ4 312 aa9.88□□□□□ -0.83
Col5a1-201ENSMUST00000028280 4930507D05RikQ8C9C9 103 aa9.87□□□□□ -0.83
Col5a1-201ENSMUST00000028280 Rtl10D3YWW5 146 aa9.86□□□□□ -0.83
Col5a1-201ENSMUST00000028280 Odf3l2Q3TZ65 277 aa9.86□□□□□ -0.83
Col5a1-201ENSMUST00000028280 Ighv2-2A0A075B5P8 116 aa9.86□□□□□ -0.83
Col5a1-201ENSMUST00000028280 P01821 116 aa9.86□□□□□ -0.83
Col5a1-201ENSMUST00000028280 Q9DAB9 146 aa9.85□□□□□ -0.83
Col5a1-201ENSMUST00000028280 Lce6aD3YV94 81 aa9.85□□□□□ -0.83
Col5a1-201ENSMUST00000028280 1700018G05RikA0A1B0GSI2 66 aa9.84□□□□□ -0.83
Col5a1-201ENSMUST00000028280 Usp9yF8VPU6 2556 aa9.83□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Gm21886J3QJU9 214 aa9.83□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Q8BGJ3 129 aa9.83□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Rnase13Q5GAM7 153 aa9.83□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Gm3443F7CCV5 94 aa9.82□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Gm9767G3X930 207 aa9.82□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Defb1P56386 69 aa9.82□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Crip3Q6Q6R3 243 aa9.82□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Cd164l2Q9D6W7 172 aa9.81□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Usp9xP70398 2559 aaKnown RBP9.81□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Gm5464Q3UY29 175 aa9.81□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Znf580Q9DB38 172 aa9.8□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Epg5Q80TA9 2572 aa9.8□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Gm10300Q8C8P7 189 aa9.8□□□□□ -0.84
Col5a1-201ENSMUST00000028280 Cdc42se1Q8BHL7 80 aa9.77□□□□□ -0.85
Col5a1-201ENSMUST00000028280 AI606181Q8C7B9 129 aa9.77□□□□□ -0.85
Col5a1-201ENSMUST00000028280 HrnrQ8VHD8 2496 aa9.77□□□□□ -0.85
Col5a1-201ENSMUST00000028280 Dmac1Q9CQ00 111 aa9.76□□□□□ -0.85
Col5a1-201ENSMUST00000028280 Phxr5P08399 672 aa9.75□□□□□ -0.85
Col5a1-201ENSMUST00000028280 Gm10642Q3TWM1 71 aa9.75□□□□□ -0.85
Col5a1-201ENSMUST00000028280 Gm44790A0A0N4SV91 103 aa9.75□□□□□ -0.85
Col5a1-201ENSMUST00000028280 Gm10643Q3URG9 111 aa9.74□□□□□ -0.85
Col5a1-201ENSMUST00000028280 CrygaP04345 174 aa9.73□□□□□ -0.85
Col5a1-201ENSMUST00000028280 TrrapQ80YV3 2565 aaKnown RBP9.73□□□□□ -0.85
Col5a1-201ENSMUST00000028280 Col4a2P08122 1707 aa9.71□□□□□ -0.85
Col5a1-201ENSMUST00000028280 Coa5Q99M07 74 aa9.71□□□□□ -0.86
Col5a1-201ENSMUST00000028280 Usp24B1AY13 2617 aaKnown RBP9.71□□□□□ -0.86
Col5a1-201ENSMUST00000028280 Elof1P60003 83 aa9.7□□□□□ -0.86
Col5a1-201ENSMUST00000028280 Gm11627A6PWP4 55 aa9.69□□□□□ -0.86
Col5a1-201ENSMUST00000028280 Prr9Q8BV84 116 aa9.69□□□□□ -0.86
Col5a1-201ENSMUST00000028280 Defb2P82020 71 aa9.69□□□□□ -0.86
Col5a1-201ENSMUST00000028280 AI854703Q8BIN3 203 aa9.68□□□□□ -0.86
Col5a1-201ENSMUST00000028280 3110070M22RikQ9DAQ7 118 aa9.68□□□□□ -0.86
Col5a1-201ENSMUST00000028280 Prr13Q9CQJ5 137 aa9.68□□□□□ -0.86
Col5a1-201ENSMUST00000028280 Bri3P28662 125 aa9.67□□□□□ -0.86
Col5a1-201ENSMUST00000028280 Uqcr11Q9CPX8 56 aa9.66□□□□□ -0.86
Col5a1-201ENSMUST00000028280 Gm10308Q9CVR5 141 aa9.66□□□□□ -0.86
Col5a1-201ENSMUST00000028280 Ankrd17Q99NH0 2603 aaKnown RBP9.65□□□□□ -0.86
Col5a1-201ENSMUST00000028280 Gm10770F7D043 238 aa9.65□□□□□ -0.87
Col5a1-201ENSMUST00000028280 Rpl37aP61514 92 aa9.64□□□□□ -0.87
Col5a1-201ENSMUST00000028280 Defb10Q8R2I8 73 aa9.64□□□□□ -0.87
Col5a1-201ENSMUST00000028280 Nbeal1E9PYP2 2688 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 72.7 ms