RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Gm9573F7C950 1606 aa10.79□□□□□ -0.68
Col2a1-201ENSMUST00000023123 4930518I15RikQ3V2W7 57 aa10.78□□□□□ -0.68
Col2a1-201ENSMUST00000023123 CrygeQ03740 174 aa10.78□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Kiaa1549Q68FD9 1940 aa10.77□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Gm5464Q3UY29 175 aa10.77□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Rps28P62858 69 aaKnown RBP10.77□□□□□ -0.69
Col2a1-201ENSMUST00000023123 Hivep2Q3UHF7 2430 aa10.77□□□□□ -0.69
Col2a1-201ENSMUST00000023123 Ighv8-13A0A075B5Y0 101 aa10.76□□□□□ -0.69
Col2a1-201ENSMUST00000023123 Lrp4Q8VI56 1905 aa10.76□□□□□ -0.69
Col2a1-201ENSMUST00000023123 PolqQ8CGS6 2544 aa10.76□□□□□ -0.69
Col2a1-201ENSMUST00000023123 Usp9xP70398 2559 aaKnown RBP10.76□□□□□ -0.69
Col2a1-201ENSMUST00000023123 Gm4707V9GXN5 68 aa10.75□□□□□ -0.69
Col2a1-201ENSMUST00000023123 Ighv2-5A0A0A6YY69 116 aa10.75□□□□□ -0.69
Col2a1-201ENSMUST00000023123 Spint4Q9D263 159 aa10.75□□□□□ -0.69
Col2a1-201ENSMUST00000023123 Znf580Q9DB38 172 aa10.75□□□□□ -0.69
Col2a1-201ENSMUST00000023123 Gm9887F6RFI0 207 aa10.73□□□□□ -0.69
Col2a1-201ENSMUST00000023123 Gm10197F6QEY5 67 aa10.71□□□□□ -0.7
Col2a1-201ENSMUST00000023123 Q9DAA7 145 aa10.7□□□□□ -0.7
Col2a1-201ENSMUST00000023123 Gm43218A0A0G2JGT0 114 aa10.69□□□□□ -0.7
Col2a1-201ENSMUST00000023123 Krtap16-1A2A5X5 502 aa10.69□□□□□ -0.7
Col2a1-201ENSMUST00000023123 Cd164Q9R0L9 197 aa10.69□□□□□ -0.7
Col2a1-201ENSMUST00000023123 Gm10300Q8C8P7 189 aa10.68□□□□□ -0.7
Col2a1-201ENSMUST00000023123 P01819 144 aa10.67□□□□□ -0.7
Col2a1-201ENSMUST00000023123 Ighv2-2A0A075B5P8 116 aa10.67□□□□□ -0.7
Col2a1-201ENSMUST00000023123 P01821 116 aa10.67□□□□□ -0.7
Col2a1-201ENSMUST00000023123 Gm28230A0A0A0MQ91 144 aa10.67□□□□□ -0.7
Col2a1-201ENSMUST00000023123 Gm16485Q8C4B7 115 aa10.66□□□□□ -0.7
Col2a1-201ENSMUST00000023123 Igkv3-7A0A0G2JE31 119 aa10.66□□□□□ -0.7
Col2a1-201ENSMUST00000023123 Igkv8-28A0A0G2JE47 121 aa10.65□□□□□ -0.7
Col2a1-201ENSMUST00000023123 Wfdc6bF6ULY1 148 aa10.65□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Defb2P82020 71 aa10.65□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Sostdc1Q9CQN4 206 aa10.65□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Cox6a2P43023 97 aa10.64□□□□□ -0.71
Col2a1-201ENSMUST00000023123 4930519P11RikQ9CUJ8 166 aa10.64□□□□□ -0.71
Col2a1-201ENSMUST00000023123 CrygaP04345 174 aa10.64□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Reg3aO09037 175 aa10.63□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Mrpl34Q99N91 92 aa10.63□□□□□ -0.71
Col2a1-201ENSMUST00000023123 AI854703Q8BIN3 203 aa10.62□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Bri3P28662 125 aa10.61□□□□□ -0.71
Col2a1-201ENSMUST00000023123 MobpQ9D2P8 170 aa10.61□□□□□ -0.71
Col2a1-201ENSMUST00000023123 TrrapQ80YV3 2565 aaKnown RBP10.61□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Bean1Q9EQG5 255 aa10.61□□□□□ -0.71
Col2a1-201ENSMUST00000023123 A530084C06RikQ3UTW2 186 aa10.61□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Wfdc3Q14AE4 130 aa10.6□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Fam19a3Q7TPG6 132 aa10.6□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Lama2Q60675 3118 aaKnown RBP10.6□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Cep350E9Q309 3095 aa10.6□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Chchd10Q7TNL9 138 aa10.59□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Msrb1Q9JLC3 116 aa10.59□□□□□ -0.71
Col2a1-201ENSMUST00000023123 Igkv8-27A0A0G2JF28 120 aa10.58□□□□□ -0.72
Col2a1-201ENSMUST00000023123 Gm10160F6Y577 67 aa10.58□□□□□ -0.72
Col2a1-201ENSMUST00000023123 Defb37Q7TMD2 62 aa10.58□□□□□ -0.72
Col2a1-201ENSMUST00000023123 Dnah12Q3V0Q1 3086 aa10.58□□□□□ -0.72
Col2a1-201ENSMUST00000023123 TrioQ0KL02 3102 aa10.57□□□□□ -0.72
Col2a1-201ENSMUST00000023123 Adm2Q7TNK8 150 aa10.57□□□□□ -0.72
Col2a1-201ENSMUST00000023123 6430550D23RikE9Q1X6 194 aa10.57□□□□□ -0.72
Col2a1-201ENSMUST00000023123 Wfdc17Q5SSJ1 76 aa10.56□□□□□ -0.72
Col2a1-201ENSMUST00000023123 Col27a1Q5QNQ9 1845 aa10.55□□□□□ -0.72
Col2a1-201ENSMUST00000023123 Prr13Q9CQJ5 137 aa10.55□□□□□ -0.72
Col2a1-201ENSMUST00000023123 A730009L09RikA0A1B0GS82 72 aa10.54□□□□□ -0.72
Col2a1-201ENSMUST00000023123 2310034G01RikA0A286YDL3 209 aa10.54□□□□□ -0.72
Col2a1-201ENSMUST00000023123 Gm21886J3QJU9 214 aa10.53□□□□□ -0.72
Col2a1-201ENSMUST00000023123 Gm9903Q8C9Y8 129 aa10.53□□□□□ -0.72
Col2a1-201ENSMUST00000023123 Elof1P60003 83 aa10.52□□□□□ -0.73
Col2a1-201ENSMUST00000023123 Srsf12Q8C8K3 266 aa10.52□□□□□ -0.73
Col2a1-201ENSMUST00000023123 Setd2E9Q5F9 2537 aa10.52□□□□□ -0.73
Col2a1-201ENSMUST00000023123 Gm10308Q9CVR5 141 aa10.51□□□□□ -0.73
Col2a1-201ENSMUST00000023123 1700018G05RikA0A1B0GSI2 66 aa10.5□□□□□ -0.73
Col2a1-201ENSMUST00000023123 Bahcc1Q3UHR0 2643 aa10.5□□□□□ -0.73
Col2a1-201ENSMUST00000023123 Gm26661M0QWV4 156 aa10.49□□□□□ -0.73
Col2a1-201ENSMUST00000023123 Limd2Q8BGB5 128 aa10.49□□□□□ -0.73
Col2a1-201ENSMUST00000023123 7530416G11RikJ3QJX6 159 aa10.49□□□□□ -0.73
Col2a1-201ENSMUST00000023123 Gm11627A6PWP4 55 aa10.49□□□□□ -0.73
Col2a1-201ENSMUST00000023123 Krtap26-1Q9D7N2 215 aa10.47□□□□□ -0.73
Col2a1-201ENSMUST00000023123 Dmac1Q9CQ00 111 aa10.47□□□□□ -0.73
Col2a1-201ENSMUST00000023123 1600014C23RikQ9DAX4 101 aa10.47□□□□□ -0.73
Col2a1-201ENSMUST00000023123 Psors1c2Q80ZC9 134 aa10.47□□□□□ -0.73
Col2a1-201ENSMUST00000023123 Igkv8-19A0A0G2JFN8 121 aa10.46□□□□□ -0.73
Col2a1-201ENSMUST00000023123 Hcfc1Q61191 2045 aaKnown RBP10.46□□□□□ -0.74
Col2a1-201ENSMUST00000023123 Gm44790A0A0N4SV91 103 aa10.46□□□□□ -0.74
Col2a1-201ENSMUST00000023123 Zfp462B1AWL2 2495 aaKnown RBP10.43□□□□□ -0.74
Col2a1-201ENSMUST00000023123 Defb39Q70KL3 74 aa10.42□□□□□ -0.74
Col2a1-201ENSMUST00000023123 Gm10770F7D043 238 aa10.41□□□□□ -0.74
Col2a1-201ENSMUST00000023123 Gm16181B0V2H2 73 aa10.41□□□□□ -0.74
Col2a1-201ENSMUST00000023123 Col5a1O88207 1838 aa10.41□□□□□ -0.74
Col2a1-201ENSMUST00000023123 MtorQ9JLN9 2549 aa10.41□□□□□ -0.74
Col2a1-201ENSMUST00000023123 Gm28374F6SG70 93 aa10.41□□□□□ -0.74
Col2a1-201ENSMUST00000023123 Ly6g6cQ9Z1Q4 126 aa10.4□□□□□ -0.74
Col2a1-201ENSMUST00000023123 E130208F15RikQ3UPV3 143 aa10.4□□□□□ -0.75
Col2a1-201ENSMUST00000023123 Cdc42se1Q8BHL7 80 aa10.39□□□□□ -0.75
Col2a1-201ENSMUST00000023123 Abca12E9Q876 2595 aa10.39□□□□□ -0.75
Col2a1-201ENSMUST00000023123 Col4a2P08122 1707 aa10.39□□□□□ -0.75
Col2a1-201ENSMUST00000023123 Lama3Q61789 3330 aa10.38□□□□□ -0.75
Col2a1-201ENSMUST00000023123 Gm17689B3GLJ4 109 aa10.36□□□□□ -0.75
Col2a1-201ENSMUST00000023123 Gm10772F7AIG4 85 aa10.36□□□□□ -0.75
Col2a1-201ENSMUST00000023123 Zfp292Q9Z2U2 2698 aa10.36□□□□□ -0.75
Col2a1-201ENSMUST00000023123 CenpfE9Q3P4 2997 aaKnown RBP10.33□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Defb10Q8R2I8 73 aa10.33□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Gm10642Q3TWM1 71 aa10.32□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Eif4ebp3Q80VV3 101 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 81.8 ms