RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Tmem223Q9CQE2 199 aaKnown RBP7.75□□□□□ -1.17
Vps54-201ENSMUST00000006221 Defa20Q45VN2 95 aa7.75□□□□□ -1.17
Vps54-201ENSMUST00000006221 Igkv8-18A0A0B4J1J3 123 aa7.74□□□□□ -1.17
Vps54-201ENSMUST00000006221 Defa2P28309 93 aa7.74□□□□□ -1.17
Vps54-201ENSMUST00000006221 D130052B06RikQ3UW13 202 aa7.74□□□□□ -1.17
Vps54-201ENSMUST00000006221 Gm5153P01627 120 aa7.74□□□□□ -1.17
Vps54-201ENSMUST00000006221 Gm10845Q3UNY9 185 aa7.74□□□□□ -1.17
Vps54-201ENSMUST00000006221 Krtap11-1E9Q2E9 183 aa7.73□□□□□ -1.17
Vps54-201ENSMUST00000006221 CrygfQ9CXV3 174 aa7.73□□□□□ -1.17
Vps54-201ENSMUST00000006221 Q8R092 253 aa7.73□□□□□ -1.17
Vps54-201ENSMUST00000006221 Smim26Q3V460 107 aa7.72□□□□□ -1.17
Vps54-201ENSMUST00000006221 Higd2aQ9CQJ1 106 aa7.72□□□□□ -1.17
Vps54-201ENSMUST00000006221 Notch1Q01705 2531 aa7.72□□□□□ -1.17
Vps54-201ENSMUST00000006221 Itpr2Q9Z329 2701 aa7.72□□□□□ -1.17
Vps54-201ENSMUST00000006221 Gm10518F6UQQ9 182 aa7.71□□□□□ -1.17
Vps54-201ENSMUST00000006221 Tmem86bQ497J1 226 aa7.71□□□□□ -1.17
Vps54-201ENSMUST00000006221 ScxQ64124 207 aa7.71□□□□□ -1.17
Vps54-201ENSMUST00000006221 Gm20726G3UX18 150 aa7.71□□□□□ -1.17
Vps54-201ENSMUST00000006221 7530416G11RikJ3QJX6 159 aa7.71□□□□□ -1.17
Vps54-201ENSMUST00000006221 Klk11Q9QYN3 276 aa7.71□□□□□ -1.17
Vps54-201ENSMUST00000006221 Igkv4-58A0A0G2JGI6 119 aa7.71□□□□□ -1.18
Vps54-201ENSMUST00000006221 Igkv8-16A0A0G2JDG9 121 aa7.71□□□□□ -1.18
Vps54-201ENSMUST00000006221 Gm3618D3Z4P5 127 aa7.71□□□□□ -1.18
Vps54-201ENSMUST00000006221 CrygdP04342 174 aa7.71□□□□□ -1.18
Vps54-201ENSMUST00000006221 CrygeQ03740 174 aa7.71□□□□□ -1.18
Vps54-201ENSMUST00000006221 Gm2916Q9D9B9 127 aa7.71□□□□□ -1.18
Vps54-201ENSMUST00000006221 Igkv3-9A0A140T8P4 119 aa7.7□□□□□ -1.18
Vps54-201ENSMUST00000006221 Q9DAA7 145 aa7.7□□□□□ -1.18
Vps54-201ENSMUST00000006221 Hivep1Q03172 2688 aa7.7□□□□□ -1.18
Vps54-201ENSMUST00000006221 Dad1P61804 113 aa7.69□□□□□ -1.18
Vps54-201ENSMUST00000006221 Erdr1J3QMM0 206 aa7.69□□□□□ -1.18
Vps54-201ENSMUST00000006221 Igkv8-24A0A140T8P5 121 aa7.69□□□□□ -1.18
Vps54-201ENSMUST00000006221 E130208F15RikQ3UPV3 143 aa7.69□□□□□ -1.18
Vps54-201ENSMUST00000006221 Notch2O35516 2470 aa7.68□□□□□ -1.18
Vps54-201ENSMUST00000006221 Hist1h4aP62806 103 aaKnown RBP7.68□□□□□ -1.18
Vps54-201ENSMUST00000006221 Stab1Q8R4Y4 2571 aa7.68□□□□□ -1.18
Vps54-201ENSMUST00000006221 Mzt1Q8BUR9 78 aa7.68□□□□□ -1.18
Vps54-201ENSMUST00000006221 A830031A19RikQ8BNT5 113 aa7.68□□□□□ -1.18
Vps54-201ENSMUST00000006221 Naa38Q9D2U5 125 aa7.67□□□□□ -1.18
Vps54-201ENSMUST00000006221 Gm9903Q8C9Y8 129 aa7.67□□□□□ -1.18
Vps54-201ENSMUST00000006221 Reg3dQ9QUS9 175 aa7.67□□□□□ -1.18
Vps54-201ENSMUST00000006221 CnbpP53996 178 aaKnown RBP7.67□□□□□ -1.18
Vps54-201ENSMUST00000006221 A0A286YCN5 57 aa7.66□□□□□ -1.18
Vps54-201ENSMUST00000006221 PtprqP0C5E4 2300 aa7.66□□□□□ -1.18
Vps54-201ENSMUST00000006221 Rpl18aP62717 176 aaKnown RBP7.66□□□□□ -1.18
Vps54-201ENSMUST00000006221 Psors1c2Q80ZC9 134 aa7.66□□□□□ -1.18
Vps54-201ENSMUST00000006221 P01819 144 aa7.66□□□□□ -1.18
Vps54-201ENSMUST00000006221 Ighv2-9A0A075B5Q5 116 aa7.65□□□□□ -1.18
Vps54-201ENSMUST00000006221 Srrm2Q8BTI8 2703 aaKnown RBP7.65□□□□□ -1.19
Vps54-201ENSMUST00000006221 Igkv8-27A0A0G2JF28 120 aa7.64□□□□□ -1.19
Vps54-201ENSMUST00000006221 E130218I03RikA0A0U1RNU5 63 aa7.64□□□□□ -1.19
Vps54-201ENSMUST00000006221 Igkv8-30A0A140T8M3 121 aa7.64□□□□□ -1.19
Vps54-201ENSMUST00000006221 Defa7P50705 93 aa7.64□□□□□ -1.19
Vps54-201ENSMUST00000006221 EnhoQ8K1D8 76 aa7.64□□□□□ -1.19
Vps54-201ENSMUST00000006221 Gm9805F6YK59 57 aa7.64□□□□□ -1.19
Vps54-201ENSMUST00000006221 Ntn5Q3UQ22 452 aa7.64□□□□□ -1.19
Vps54-201ENSMUST00000006221 Igkv8-21A0A140T8P7 120 aa7.64□□□□□ -1.19
Vps54-201ENSMUST00000006221 Tcl1b3P56842 122 aa7.64□□□□□ -1.19
Vps54-201ENSMUST00000006221 4930556J24RikQ9D4U7 146 aa7.64□□□□□ -1.19
Vps54-201ENSMUST00000006221 Col6a5A6H584 2640 aa7.63□□□□□ -1.19
Vps54-201ENSMUST00000006221 SvipQ3UZP4 77 aa7.63□□□□□ -1.19
Vps54-201ENSMUST00000006221 4930518I15RikQ3V2W7 57 aa7.63□□□□□ -1.19
Vps54-201ENSMUST00000006221 Fam19a1Q7TPG8 133 aa7.63□□□□□ -1.19
Vps54-201ENSMUST00000006221 Cox7bP56393 80 aa7.63□□□□□ -1.19
Vps54-201ENSMUST00000006221 MplkipQ9D011 178 aa7.63□□□□□ -1.19
Vps54-201ENSMUST00000006221 Ighv10-3A0A075B5T6 119 aa7.63□□□□□ -1.19
Vps54-201ENSMUST00000006221 Csdc2Q91YQ3 154 aa7.62□□□□□ -1.19
Vps54-201ENSMUST00000006221 Igkv3-1A0A075B5P1 119 aa7.61□□□□□ -1.19
Vps54-201ENSMUST00000006221 Ighv13-2A0A0A6YWN3 119 aa7.61□□□□□ -1.19
Vps54-201ENSMUST00000006221 Tmem254aP0DN89 123 aa7.61□□□□□ -1.19
Vps54-201ENSMUST00000006221 Tmem254bP0DN90 123 aa7.61□□□□□ -1.19
Vps54-201ENSMUST00000006221 Tmem254cP0DN91 123 aa7.61□□□□□ -1.19
Vps54-201ENSMUST00000006221 Defa21Q8C1P2 93 aa7.61□□□□□ -1.19
Vps54-201ENSMUST00000006221 VwfQ8CIZ8 2813 aa7.61□□□□□ -1.19
Vps54-201ENSMUST00000006221 Gm11213A0A1B0GR83 88 aa7.61□□□□□ -1.19
Vps54-201ENSMUST00000006221 Fam229bQ8CF36 80 aa7.61□□□□□ -1.19
Vps54-201ENSMUST00000006221 FlnbQ80X90 2602 aaKnown RBP7.61□□□□□ -1.19
Vps54-201ENSMUST00000006221 Klk9Q32M27 251 aa7.6□□□□□ -1.19
Vps54-201ENSMUST00000006221 AY074887Q8R5F9 132 aa7.6□□□□□ -1.19
Vps54-201ENSMUST00000006221 Msrb1Q9JLC3 116 aa7.6□□□□□ -1.19
Vps54-201ENSMUST00000006221 Igkv8-26A0A075B5N5 123 aa7.6□□□□□ -1.19
Vps54-201ENSMUST00000006221 Ube2d4D3YUH6 135 aa7.6□□□□□ -1.19
Vps54-201ENSMUST00000006221 Gm7138L7N2C3 230 aa7.6□□□□□ -1.19
Vps54-201ENSMUST00000006221 Gm3238W4VSP7 230 aa7.6□□□□□ -1.19
Vps54-201ENSMUST00000006221 Kmt2aP55200 3966 aa7.6□□□□□ -1.19
Vps54-201ENSMUST00000006221 Defa4P28311 92 aa7.59□□□□□ -1.19
Vps54-201ENSMUST00000006221 Ormdl1Q921I0 153 aa7.59□□□□□ -1.19
Vps54-201ENSMUST00000006221 Igkv1-88A0A140T8N1 120 aa7.58□□□□□ -1.2
Vps54-201ENSMUST00000006221 Defb37Q7TMD2 62 aa7.58□□□□□ -1.2
Vps54-201ENSMUST00000006221 Gm10308Q9CVR5 141 aa7.58□□□□□ -1.2
Vps54-201ENSMUST00000006221 A730009L09RikA0A1B0GS82 72 aa7.58□□□□□ -1.2
Vps54-201ENSMUST00000006221 Gm10770F7D043 238 aa7.58□□□□□ -1.2
Vps54-201ENSMUST00000006221 Lamtor3O88653 124 aa7.58□□□□□ -1.2
Vps54-201ENSMUST00000006221 Snhg11Q4G0K9 87 aa7.58□□□□□ -1.2
Vps54-201ENSMUST00000006221 Ufsp1Q9CZP0 217 aa7.57□□□□□ -1.2
Vps54-201ENSMUST00000006221 Ighv10-1A0A0B4J1J6 119 aa7.57□□□□□ -1.2
Vps54-201ENSMUST00000006221 Mrpl52Q9D0Y8 121 aa7.57□□□□□ -1.2
Vps54-201ENSMUST00000006221 Ighv8-13A0A075B5Y0 101 aa7.57□□□□□ -1.2
Vps54-201ENSMUST00000006221 Serp2Q6TAW2 65 aa7.57□□□□□ -1.2
Vps54-201ENSMUST00000006221 Tmem243B2RVB9 118 aa7.56□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms