RNA–Protein interactions for RNA: ENSMUST00000004097.15

Cux1-201, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cux1, Length 12,862 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-201ENSMUST00000004097 NpyP57774 97 aa5.89□□□□□ -1.47
Cux1-201ENSMUST00000004097 Pou2af1Q64693 256 aa5.89□□□□□ -1.47
Cux1-201ENSMUST00000004097 Ntn5Q3UQ22 452 aa5.89□□□□□ -1.47
Cux1-201ENSMUST00000004097 Gm5617Q91VN2 117 aa5.89□□□□□ -1.47
Cux1-201ENSMUST00000004097 Wdr38Q9D994 303 aa5.88□□□□□ -1.47
Cux1-201ENSMUST00000004097 Gm20661K7N787 53 aa5.88□□□□□ -1.47
Cux1-201ENSMUST00000004097 Phf5aP83870 110 aaKnown RBP5.88□□□□□ -1.47
Cux1-201ENSMUST00000004097 Rtl10D3YWW5 146 aa5.88□□□□□ -1.47
Cux1-201ENSMUST00000004097 Ighv1-75A0A075B5Y2 117 aa5.88□□□□□ -1.47
Cux1-201ENSMUST00000004097 Gm16223Q8CBM3 117 aa5.88□□□□□ -1.47
Cux1-201ENSMUST00000004097 Akap13E9Q394 2776 aa5.87□□□□□ -1.47
Cux1-201ENSMUST00000004097 Gm5629P06327 117 aa5.87□□□□□ -1.47
Cux1-201ENSMUST00000004097 Ndufa4l2Q4FZG9 87 aa5.87□□□□□ -1.47
Cux1-201ENSMUST00000004097 Ndufc1Q9CQY9 76 aa5.87□□□□□ -1.47
Cux1-201ENSMUST00000004097 Snai3Q9QY31 287 aa5.87□□□□□ -1.47
Cux1-201ENSMUST00000004097 Cd27P41272 250 aa5.87□□□□□ -1.47
Cux1-201ENSMUST00000004097 Gm17509Q9CZ61 145 aa5.87□□□□□ -1.47
Cux1-201ENSMUST00000004097 Znf414Q9DCK4 299 aa5.87□□□□□ -1.47
Cux1-201ENSMUST00000004097 Gm26661M0QWV4 156 aa5.87□□□□□ -1.47
Cux1-201ENSMUST00000004097 Reg3aO09037 175 aa5.87□□□□□ -1.47
Cux1-201ENSMUST00000004097 A830031A19RikQ8BNT5 113 aa5.87□□□□□ -1.47
Cux1-201ENSMUST00000004097 Gm21886J3QJU9 214 aa5.87□□□□□ -1.47
Cux1-201ENSMUST00000004097 A930009A15RikG3UYI6 118 aa5.86□□□□□ -1.47
Cux1-201ENSMUST00000004097 Q9DAQ5 155 aa5.86□□□□□ -1.47
Cux1-201ENSMUST00000004097 Ep400Q8CHI8 3072 aaKnown RBP5.86□□□□□ -1.47
Cux1-201ENSMUST00000004097 A930002H24RikQ8C8Y3 163 aa5.86□□□□□ -1.47
Cux1-201ENSMUST00000004097 Epg5Q80TA9 2572 aa5.86□□□□□ -1.47
Cux1-201ENSMUST00000004097 Gm3443F7CCV5 94 aa5.86□□□□□ -1.47
Cux1-201ENSMUST00000004097 Gm5878E9PUB3 99 aa5.86□□□□□ -1.47
Cux1-201ENSMUST00000004097 Q9DAA7 145 aa5.85□□□□□ -1.47
Cux1-201ENSMUST00000004097 Gm3285A0A1W2P7U0 201 aa5.85□□□□□ -1.47
Cux1-201ENSMUST00000004097 Rnase13Q5GAM7 153 aa5.85□□□□□ -1.47
Cux1-201ENSMUST00000004097 7530416G11RikJ3QJX6 159 aa5.85□□□□□ -1.47
Cux1-201ENSMUST00000004097 Gm5153P01627 120 aa5.85□□□□□ -1.47
Cux1-201ENSMUST00000004097 Spata3Q9D9T6 193 aa5.84□□□□□ -1.47
Cux1-201ENSMUST00000004097 P04944 107 aa5.84□□□□□ -1.47
Cux1-201ENSMUST00000004097 Mp68P56379 58 aa5.84□□□□□ -1.47
Cux1-201ENSMUST00000004097 CdsnQ7TPC1 561 aa5.83□□□□□ -1.48
Cux1-201ENSMUST00000004097 Nbeal1E9PYP2 2688 aa5.83□□□□□ -1.48
Cux1-201ENSMUST00000004097 Cdc42se2Q8BGH7 84 aa5.83□□□□□ -1.48
Cux1-201ENSMUST00000004097 1700011M02RikB1AX35 88 aa5.83□□□□□ -1.48
Cux1-201ENSMUST00000004097 Fgfbp3Q1HCM0 245 aa5.83□□□□□ -1.48
Cux1-201ENSMUST00000004097 Spink7Q6IE32 76 aa5.83□□□□□ -1.48
Cux1-201ENSMUST00000004097 Gm27235Q3UW50 83 aa5.83□□□□□ -1.48
Cux1-201ENSMUST00000004097 Ighv1-66A0A075B5X5 117 aa5.83□□□□□ -1.48
Cux1-201ENSMUST00000004097 Cox7cP17665 63 aa5.82□□□□□ -1.48
Cux1-201ENSMUST00000004097 Rnf185Q91YT2 192 aa5.82□□□□□ -1.48
Cux1-201ENSMUST00000004097 Carhsp1Q9CR86 148 aa5.82□□□□□ -1.48
Cux1-201ENSMUST00000004097 Gm26602M0QWA4 95 aa5.81□□□□□ -1.48
Cux1-201ENSMUST00000004097 Sox16Q62247 57 aa5.81□□□□□ -1.48
Cux1-201ENSMUST00000004097 2310034G01RikA0A286YDL3 209 aa5.81□□□□□ -1.48
Cux1-201ENSMUST00000004097 Gm5464Q3UY29 175 aa5.8□□□□□ -1.48
Cux1-201ENSMUST00000004097 UqcrqQ9CQ69 82 aa5.8□□□□□ -1.48
Cux1-201ENSMUST00000004097 Gm17689B3GLJ4 109 aa5.8□□□□□ -1.48
Cux1-201ENSMUST00000004097 1700018G05RikA0A1B0GSI2 66 aa5.8□□□□□ -1.48
Cux1-201ENSMUST00000004097 OxtP35454 125 aa5.8□□□□□ -1.48
Cux1-201ENSMUST00000004097 HrnrQ8VHD8 2496 aa5.79□□□□□ -1.48
Cux1-201ENSMUST00000004097 Dmbt1Q60997 2085 aa5.79□□□□□ -1.48
Cux1-201ENSMUST00000004097 Sprr2jO70561 109 aa5.79□□□□□ -1.48
Cux1-201ENSMUST00000004097 Q9DAB9 146 aa5.79□□□□□ -1.48
Cux1-201ENSMUST00000004097 Fam19a3Q7TPG6 132 aa5.78□□□□□ -1.48
Cux1-201ENSMUST00000004097 Gm10509O88255 85 aa5.77□□□□□ -1.49
Cux1-201ENSMUST00000004097 Phxr5P08399 672 aa5.77□□□□□ -1.49
Cux1-201ENSMUST00000004097 Gm5142Q8C5X9 133 aa5.77□□□□□ -1.49
Cux1-201ENSMUST00000004097 CrygaP04345 174 aa5.77□□□□□ -1.49
Cux1-201ENSMUST00000004097 BC025920Q3US60 128 aa5.77□□□□□ -1.49
Cux1-201ENSMUST00000004097 Cd164Q9R0L9 197 aa5.77□□□□□ -1.49
Cux1-201ENSMUST00000004097 Gm9821Q8K076 103 aa5.75□□□□□ -1.49
Cux1-201ENSMUST00000004097 Gm26566Q8CAC1 153 aa5.75□□□□□ -1.49
Cux1-201ENSMUST00000004097 2310009B15RikA0A0A6YWI4 143 aa5.75□□□□□ -1.49
Cux1-201ENSMUST00000004097 Cep192E9Q4Y4 2514 aaKnown RBP5.75□□□□□ -1.49
Cux1-201ENSMUST00000004097 Znf239P24399 201 aa5.75□□□□□ -1.49
Cux1-201ENSMUST00000004097 Gm10837Q3UTT8 145 aa5.75□□□□□ -1.49
Cux1-201ENSMUST00000004097 SetxA2AKX3 2646 aa5.74□□□□□ -1.49
Cux1-201ENSMUST00000004097 Mrpl34Q99N91 92 aa5.74□□□□□ -1.49
Cux1-201ENSMUST00000004097 Gm16181B0V2H2 73 aa5.74□□□□□ -1.49
Cux1-201ENSMUST00000004097 4930507D05RikQ8C9C9 103 aa5.74□□□□□ -1.49
Cux1-201ENSMUST00000004097 Atp5eP56382 52 aa5.73□□□□□ -1.49
Cux1-201ENSMUST00000004097 Gm21060J3KMU4 56 aa5.72□□□□□ -1.49
Cux1-201ENSMUST00000004097 BtcQ05928 177 aa5.71□□□□□ -1.5
Cux1-201ENSMUST00000004097 6430550D23RikE9Q1X6 194 aa5.71□□□□□ -1.5
Cux1-201ENSMUST00000004097 Krtap24-1G3X9A2 248 aa5.71□□□□□ -1.5
Cux1-201ENSMUST00000004097 Spint4Q9D263 159 aa5.71□□□□□ -1.5
Cux1-201ENSMUST00000004097 Gm10322F7D7I4 111 aa5.7□□□□□ -1.5
Cux1-201ENSMUST00000004097 Unc79Q0KK59 2596 aa5.7□□□□□ -1.5
Cux1-201ENSMUST00000004097 Snhg11Q4G0K9 87 aa5.7□□□□□ -1.5
Cux1-201ENSMUST00000004097 Msrb1Q9JLC3 116 aa5.69□□□□□ -1.5
Cux1-201ENSMUST00000004097 Lama3Q61789 3330 aa5.69□□□□□ -1.5
Cux1-201ENSMUST00000004097 Gm10160F6Y577 67 aa5.69□□□□□ -1.5
Cux1-201ENSMUST00000004097 Odf3l2Q3TZ65 277 aa5.69□□□□□ -1.5
Cux1-201ENSMUST00000004097 Fam168bQ80XQ8 194 aa5.68□□□□□ -1.5
Cux1-201ENSMUST00000004097 Gm3233E9Q2H5 230 aa5.68□□□□□ -1.5
Cux1-201ENSMUST00000004097 CicQ924A2 2510 aa5.68□□□□□ -1.5
Cux1-201ENSMUST00000004097 Fn1P11276 2477 aaKnown RBP5.67□□□□□ -1.5
Cux1-201ENSMUST00000004097 Anapc11Q9CPX9 84 aa5.67□□□□□ -1.5
Cux1-201ENSMUST00000004097 Gm10549Q3URY4 149 aa5.67□□□□□ -1.5
Cux1-201ENSMUST00000004097 Gm28539A0A087WSL9 92 aa5.66□□□□□ -1.5
Cux1-201ENSMUST00000004097 Plac8Q9JI48 112 aa5.66□□□□□ -1.5
Cux1-201ENSMUST00000004097 Col4a2P08122 1707 aa5.66□□□□□ -1.5
Cux1-201ENSMUST00000004097 Sostdc1Q9CQN4 206 aa5.66□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 57.6 ms